RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 RNF139Q8WU17 664 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 JADE2Q9NQC1 790 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 MAP3K20Q9NYL2 800 aaKnown RBP9.9□□□□□ -0.82
HDAC9-229ENST00000622668 SRRDQ9UH36 339 aa9.9□□□□□ -0.82
HDAC9-229ENST00000622668 C10orf71Q711Q0 1435 aa9.9□□□□□ -0.83
HDAC9-229ENST00000622668 RSPH10B2B2RC85 870 aa9.9□□□□□ -0.83
HDAC9-229ENST00000622668 BNIP3LO60238 219 aa9.9□□□□□ -0.83
HDAC9-229ENST00000622668 HIP1RO75146 1068 aa9.9□□□□□ -0.83
HDAC9-229ENST00000622668 CABYRO75952 493 aa9.9□□□□□ -0.83
HDAC9-229ENST00000622668 SLFN14P0C7P3 912 aa9.9□□□□□ -0.83
HDAC9-229ENST00000622668 RSPH10BP0C881 870 aa9.9□□□□□ -0.83
HDAC9-229ENST00000622668 TAF3Q5VWG9 929 aa9.9□□□□□ -0.83
HDAC9-229ENST00000622668 RASAL3Q86YV0 1011 aa9.9□□□□□ -0.83
HDAC9-229ENST00000622668 NSMCE1Q8WV22 266 aa9.9□□□□□ -0.83
HDAC9-229ENST00000622668 AFG3L2Q9Y4W6 797 aa9.9□□□□□ -0.83
HDAC9-229ENST00000622668 STAT1P42224 750 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 PSEN2P49810 448 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 FKBP3Q00688 224 aaKnown RBP9.89□□□□□ -0.83
HDAC9-229ENST00000622668 SEPT7Q16181 437 aaKnown RBP9.89□□□□□ -0.83
HDAC9-229ENST00000622668 ASIC2Q16515 512 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 LBX2Q6XYB7 198 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 YAF2Q8IY57 180 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 SAAL1Q96ER3 474 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 ENTPD7Q9NQZ7 604 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 RNF186Q9NXI6 227 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 CYP39A1Q9NYL5 469 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 PHLPP2Q6ZVD8 1323 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 PEAK1Q9H792 1746 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 PSMD2Q13200 908 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 PGM5Q15124 567 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 VWA3BQ502W6 1294 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 ZNF746Q6NUN9 644 aaPredicted RBP9.89□□□□□ -0.83
HDAC9-229ENST00000622668 SND1Q7KZF4 910 aaKnown RBP eCLIP9.89□□□□□ -0.83
HDAC9-229ENST00000622668 SH3BP5LQ7L8J4 393 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 GANCQ8TET4 914 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 CLSTN2Q9H4D0 955 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 SLC28A3Q9HAS3 691 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 MYO1AQ9UBC5 1043 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 TLL2Q9Y6L7 1015 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 ASAP2O43150 1006 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 ADCY5O95622 1261 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 SRGAP2BP0DMP2 458 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 GLI3P10071 1580 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 ALCAMQ13740 583 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 HEXIM2Q96MH2 286 aaKnown RBP9.89□□□□□ -0.83
HDAC9-229ENST00000622668 LSM14BQ9BX40 385 aaKnown RBP9.89□□□□□ -0.83
HDAC9-229ENST00000622668 KIAA1468Q9P260 1216 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 SSX2IPQ9Y2D8 614 aa9.89□□□□□ -0.83
HDAC9-229ENST00000622668 LMO7Q8WWI1 1683 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 GSDMDP57764 484 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 MYL7Q01449 175 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 KLHL30Q0D2K2 578 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 KIF5AQ12840 1032 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 TATDN1Q6P1N9 297 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 SIX6OS1Q8N1H7 587 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 IGSF22Q8N9C0 903 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 KIF9Q9HAQ2 790 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 KLK14Q9P0G3 267 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 CTTNBP2NLQ9P2B4 639 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 AKAP12Q02952 1782 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 ATP8B3O60423 1300 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 LRRN2O75325 713 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 SYN1P17600 705 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 CIITAP33076 1130 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 PTK2Q05397 1052 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 IKBKEQ14164 716 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 AXDND1Q5T1B0 1012 aaPredicted RBP9.88□□□□□ -0.83
HDAC9-229ENST00000622668 CC2D1AQ6P1N0 951 aaPredicted RBP9.88□□□□□ -0.83
HDAC9-229ENST00000622668 TAF2Q6P1X5 1199 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 TRAPPC12Q8WVT3 735 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 CENPHQ9H3R5 247 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 CEP290O15078 2479 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 MSH4O15457 936 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 MRPS9P82933 396 aaKnown RBP9.88□□□□□ -0.83
HDAC9-229ENST00000622668 SEC23AQ15436 765 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 XXYLT1Q8NBI6 393 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 BBXQ8WY36 941 aaPredicted RBP9.88□□□□□ -0.83
HDAC9-229ENST00000622668 CCDC114Q96M63 670 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 MYOM1P52179 1685 aa9.88□□□□□ -0.83
HDAC9-229ENST00000622668 RFC5P40937 340 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 TERF1P54274 439 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 GPS2Q13227 327 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 GRIK4Q16099 956 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 EXOC3L4Q17RC7 722 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 ZNF484Q5JVG2 852 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 NOTUMQ6P988 496 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 RUFY4Q6ZNE9 571 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 RRAGAQ7L523 313 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 UBE2OQ9C0C9 1292 aaKnown RBP9.87□□□□□ -0.83
HDAC9-229ENST00000622668 IGFLR1Q9H665 355 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 RIOX1Q9H6W3 641 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 AGO2Q9UKV8 859 aaKnown RBP9.87□□□□□ -0.83
HDAC9-229ENST00000622668 PTCH2Q9Y6C5 1203 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 TBX3O15119 743 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 B3GAT3O94766 335 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 EYA4O95677 639 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 CASP1P29466 404 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 GPC3P51654 580 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 NLRP12P59046 1061 aa9.87□□□□□ -0.83
HDAC9-229ENST00000622668 CYP27A1Q02318 531 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms