RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 TCRBV5S4A2TA0A5A2 114 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 GNA14O95837 355 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 MYBP10242 640 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 ZNF174Q15697 407 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 OLFML1Q6UWY5 402 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 ZNF654Q8IZM8 581 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 CCDC24Q8N4L8 307 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 SPATA5Q8NB90 893 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 OR2W6PQ8NHA6 318 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 NELFBQ8WX92 580 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 FERMT2Q96AC1 680 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 HIC2Q96JB3 615 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 ZNF333Q96JL9 665 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 SMC6Q96SB8 1091 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 ELAC2Q9BQ52 826 aaKnown RBP11.23□□□□□ -0.61
VPS11-207ENST00000620429 ARMT1Q9H993 441 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 MROH5Q6ZUA9 1318 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 MYH3P11055 1940 aa11.23□□□□□ -0.61
VPS11-207ENST00000620429 A0A1W2PQC6 194 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 hCG_1642624A0A1W2PR95 340 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 SNX3O60493 162 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 XBP1P17861 261 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 C1QTNF8P60827 252 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 DIXDC1Q155Q3 683 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 CLPPQ16740 277 aaPredicted RBP11.22□□□□□ -0.61
VPS11-207ENST00000620429 INF2Q27J81 1249 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 ERFEQ4G0M1 354 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 RC3H1Q5TC82 1133 aaKnown RBP11.22□□□□□ -0.61
VPS11-207ENST00000620429 TBC1D9BQ66K14 1250 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 SEPT14Q6ZU15 432 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 TMEM110Q86TL2 294 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 MAGEB6Q8N7X4 407 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 PIGOQ8TEQ8 1089 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 GATA6Q92908 595 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 ZNF512BQ96KM6 892 aaPredicted RBP11.22□□□□□ -0.61
VPS11-207ENST00000620429 NACA2Q9H009 215 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 RWDD2AQ9UIY3 292 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 CAPN6Q9Y6Q1 641 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 XDHP47989 1333 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 MYH6P13533 1939 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 SIGLEC16A6NMB1 481 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 DCDC2CA8MYV0 355 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 O00370 1275 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 CETN3O15182 167 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 SART1O43290 800 aaKnown RBP11.22□□□□□ -0.61
VPS11-207ENST00000620429 HNRNPRO43390 633 aaKnown RBP11.22□□□□□ -0.61
VPS11-207ENST00000620429 TJP3O95049 919 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 ZBTB7AO95365 584 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 MMEP08473 750 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 SLC5A1P13866 664 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 KRT2P35908 639 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 PTDSS1P48651 473 aaKnown RBP11.22□□□□□ -0.61
VPS11-207ENST00000620429 CD97P48960 835 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 CUL1Q13616 776 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 WDR60Q8WVS4 1066 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 SH2D4AQ9H788 454 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 SMARCAL1Q9NZC9 954 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 EHD2Q9NZN4 543 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 TBC1D7Q9P0N9 293 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 HSFX1Q9UBD0 423 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 NID2Q14112 1375 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 TAF1LQ8IZX4 1826 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 MYH1P12882 1939 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 WNT7AO00755 349 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 PRKAB2O43741 272 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 PRDM1O75626 825 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 ASLP04424 464 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 KCNA3P22001 575 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 ECHS1P30084 290 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 CCDC152Q4G0S7 254 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 RASIP1Q5U651 963 aa11.22□□□□□ -0.61
VPS11-207ENST00000620429 GRID2IPA4D2P6 1211 aa11.21□□□□□ -0.61
VPS11-207ENST00000620429 UQCRFS1P1P0C7P4 283 aa11.21□□□□□ -0.61
VPS11-207ENST00000620429 SKIP12755 728 aa11.21□□□□□ -0.61
VPS11-207ENST00000620429 CHN1P15882 459 aa11.21□□□□□ -0.61
VPS11-207ENST00000620429 HOXD12P35452 270 aa11.21□□□□□ -0.61
VPS11-207ENST00000620429 CHRNDQ07001 517 aa11.21□□□□□ -0.61
VPS11-207ENST00000620429 MUM1Q2TAK8 710 aa11.21□□□□□ -0.61
VPS11-207ENST00000620429 PARP10Q53GL7 1025 aa11.21□□□□□ -0.61
VPS11-207ENST00000620429 DAB2IPQ5VWQ8 1189 aa11.21□□□□□ -0.61
VPS11-207ENST00000620429 CCNJLQ8IV13 435 aa11.21□□□□□ -0.61
VPS11-207ENST00000620429 MYOCDQ8IZQ8 938 aa11.21□□□□□ -0.61
VPS11-207ENST00000620429 OGFOD1Q8N543 542 aa11.21□□□□□ -0.61
VPS11-207ENST00000620429 MDM1Q8TC05 714 aa11.21□□□□□ -0.61
VPS11-207ENST00000620429 LENG1Q96BZ8 264 aaPredicted RBP11.21□□□□□ -0.61
VPS11-207ENST00000620429 SHISA4Q96DD7 197 aa11.21□□□□□ -0.61
VPS11-207ENST00000620429 UBAC1Q9BSL1 405 aa11.21□□□□□ -0.61
VPS11-207ENST00000620429 NHEJ1Q9H9Q4 299 aaPredicted RBP11.21□□□□□ -0.61
VPS11-207ENST00000620429 SYNPO2Q9UMS6 1093 aa11.21□□□□□ -0.61
VPS11-207ENST00000620429 USP15Q9Y4E8 981 aaPredicted RBP11.21□□□□□ -0.61
VPS11-207ENST00000620429 GSG1L2A8MUP6 293 aa11.21□□□□□ -0.62
VPS11-207ENST00000620429 BHMG1C9JSJ3 638 aaPredicted RBP11.21□□□□□ -0.62
VPS11-207ENST00000620429 NVLO15381 856 aaKnown RBP11.21□□□□□ -0.62
VPS11-207ENST00000620429 BMP15O95972 392 aa11.21□□□□□ -0.62
VPS11-207ENST00000620429 ITGA2BP08514 1039 aa11.21□□□□□ -0.62
VPS11-207ENST00000620429 SMARCA1P28370 1054 aa11.21□□□□□ -0.62
VPS11-207ENST00000620429 MMP13P45452 471 aa11.21□□□□□ -0.62
VPS11-207ENST00000620429 PDE6CP51160 858 aa11.21□□□□□ -0.62
VPS11-207ENST00000620429 PTGDRQ13258 359 aa11.21□□□□□ -0.62
VPS11-207ENST00000620429 UTP4Q969X6 686 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 221.8 ms