RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 TMEM266Q2M3C6 531 aa10.9□□□□□ -0.66
TARDBP-218ENST00000617172 LEXMQ3ZCV2 418 aa10.9□□□□□ -0.66
TARDBP-218ENST00000617172 XKR3Q5GH77 459 aa10.9□□□□□ -0.66
TARDBP-218ENST00000617172 PPP4R3AQ6IN85 833 aa10.9□□□□□ -0.66
TARDBP-218ENST00000617172 MIER3Q7Z3K6 550 aa10.9□□□□□ -0.66
TARDBP-218ENST00000617172 NIFKQ9BYG3 293 aaKnown RBP10.9□□□□□ -0.66
TARDBP-218ENST00000617172 TMX1Q9H3N1 280 aa10.9□□□□□ -0.66
TARDBP-218ENST00000617172 UNC45AQ9H3U1 944 aa10.9□□□□□ -0.66
TARDBP-218ENST00000617172 CDHR5Q9HBB8 845 aa10.9□□□□□ -0.66
TARDBP-218ENST00000617172 DDX25Q9UHL0 483 aaKnown RBP10.9□□□□□ -0.66
TARDBP-218ENST00000617172 AKT3Q9Y243 479 aa10.9□□□□□ -0.66
TARDBP-218ENST00000617172 REV3LO60673 3130 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 MICAL3Q7RTP6 2002 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 TBX3O15119 743 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 CHMP2AO43633 222 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 ZNF862O60290 1169 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 TDP2O95551 362 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 VTNP04004 478 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 LINC00271P0C7V0 271 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 ZSCAN20P17040 1043 aaPredicted RBP10.89□□□□□ -0.67
TARDBP-218ENST00000617172 NLRP11P59045 1033 aaKnown RBP10.89□□□□□ -0.67
TARDBP-218ENST00000617172 FAM189BP81408 668 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 TARBP2Q15633 366 aaKnown RBP10.89□□□□□ -0.67
TARDBP-218ENST00000617172 INF2Q27J81 1249 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 LETM2Q2VYF4 491 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 B3GNT9Q6UX72 402 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 NEK8Q86SG6 692 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 EXOC8Q8IYI6 725 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 ETNPPLQ8TBG4 499 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 TMEM40Q8WWA1 233 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 PPP2R3CQ969Q6 453 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 PABPC5Q96DU9 382 aaKnown RBP10.89□□□□□ -0.67
TARDBP-218ENST00000617172 AIFM3Q96NN9 605 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 OSMRQ99650 979 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 JPH2Q9BR39 696 aaPredicted RBP10.89□□□□□ -0.67
TARDBP-218ENST00000617172 ELAC1Q9H777 363 aaKnown RBP10.89□□□□□ -0.67
TARDBP-218ENST00000617172 ATP6V0A4Q9HBG4 840 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 BRMS1Q9HCU9 246 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 AAASQ9NRG9 546 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 TMEM161AQ9NX61 479 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 ORC3Q9UBD5 711 aaPredicted RBP10.89□□□□□ -0.67
TARDBP-218ENST00000617172 KCNJ14Q9UNX9 436 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 PLAGL2Q9UPG8 496 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 FAM50BQ9Y247 325 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 PTPRSQ13332 1948 aa10.89□□□□□ -0.67
TARDBP-218ENST00000617172 C9IYK1 514 aa10.88□□□□□ -0.67
TARDBP-218ENST00000617172 RBAK-RBAKDNI3L0D1 243 aa10.88□□□□□ -0.67
TARDBP-218ENST00000617172 GRM6O15303 877 aa10.88□□□□□ -0.67
TARDBP-218ENST00000617172 HOXA2O43364 376 aa10.88□□□□□ -0.67
TARDBP-218ENST00000617172 MARCH6O60337 910 aa10.88□□□□□ -0.67
TARDBP-218ENST00000617172 MMP1P03956 469 aa10.88□□□□□ -0.67
TARDBP-218ENST00000617172 KCNA5P22460 613 aa10.88□□□□□ -0.67
TARDBP-218ENST00000617172 CLCN3P51790 818 aa10.88□□□□□ -0.67
TARDBP-218ENST00000617172 AK2P54819 239 aa10.88□□□□□ -0.67
TARDBP-218ENST00000617172 PSMC5P62195 406 aa10.88□□□□□ -0.67
TARDBP-218ENST00000617172 PPP2R5CQ13362 524 aa10.88□□□□□ -0.67
TARDBP-218ENST00000617172 COL19A1Q14993 1142 aa10.88□□□□□ -0.67
TARDBP-218ENST00000617172 CSPP1Q1MSJ5 1256 aa10.88□□□□□ -0.67
TARDBP-218ENST00000617172 TCEAL5Q5H9L2 206 aa10.88□□□□□ -0.67
TARDBP-218ENST00000617172 FAM228AQ86W67 206 aa10.88□□□□□ -0.67
TARDBP-218ENST00000617172 LINC01465Q8N7H1 131 aa10.88□□□□□ -0.67
TARDBP-218ENST00000617172 NEK9Q8TD19 979 aa10.88□□□□□ -0.67
TARDBP-218ENST00000617172 INO80BQ9C086 356 aaPredicted RBP10.88□□□□□ -0.67
TARDBP-218ENST00000617172 ADAMTS10Q9H324 1103 aa10.88□□□□□ -0.67
TARDBP-218ENST00000617172 PPME1Q9Y570 386 aa10.88□□□□□ -0.67
TARDBP-218ENST00000617172 PCDHB12Q9Y5F1 795 aa10.88□□□□□ -0.67
TARDBP-218ENST00000617172 MRPL42Q9Y6G3 142 aaKnown RBP10.88□□□□□ -0.67
TARDBP-218ENST00000617172 TTC3P53804 2025 aa10.87□□□□□ -0.67
TARDBP-218ENST00000617172 DDX11L8A8MPP1 907 aa10.87□□□□□ -0.67
TARDBP-218ENST00000617172 CCNT1O60563 726 aaKnown RBP10.87□□□□□ -0.67
TARDBP-218ENST00000617172 BAG4O95429 457 aaKnown RBP10.87□□□□□ -0.67
TARDBP-218ENST00000617172 CENPBP07199 599 aaPredicted RBP10.87□□□□□ -0.67
TARDBP-218ENST00000617172 P4HBP07237 508 aaKnown RBP10.87□□□□□ -0.67
TARDBP-218ENST00000617172 QARSP47897 775 aaKnown RBP10.87□□□□□ -0.67
TARDBP-218ENST00000617172 GPC3P51654 580 aa10.87□□□□□ -0.67
TARDBP-218ENST00000617172 NEK4P51957 841 aa10.87□□□□□ -0.67
TARDBP-218ENST00000617172 UBE3AQ05086 875 aa10.87□□□□□ -0.67
TARDBP-218ENST00000617172 DSC3Q14574 896 aa10.87□□□□□ -0.67
TARDBP-218ENST00000617172 UGCGQ16739 394 aa10.87□□□□□ -0.67
TARDBP-218ENST00000617172 PIK3AP1Q6ZUJ8 805 aa10.87□□□□□ -0.67
TARDBP-218ENST00000617172 SLFN12Q8IYM2 578 aa10.87□□□□□ -0.67
TARDBP-218ENST00000617172 LRRC71Q8N4P6 559 aa10.87□□□□□ -0.67
TARDBP-218ENST00000617172 SPPL3Q8TCT6 385 aa10.87□□□□□ -0.67
TARDBP-218ENST00000617172 RSPH1Q8WYR4 309 aa10.87□□□□□ -0.67
TARDBP-218ENST00000617172 GJA10Q969M2 543 aa10.87□□□□□ -0.67
TARDBP-218ENST00000617172 SCLT1Q96NL6 688 aa10.87□□□□□ -0.67
TARDBP-218ENST00000617172 NECAB3Q96P71 396 aaPredicted RBP10.87□□□□□ -0.67
TARDBP-218ENST00000617172 PPP1R16BQ96T49 567 aa10.87□□□□□ -0.67
TARDBP-218ENST00000617172 C1QTNF1Q9BXJ1 281 aa10.87□□□□□ -0.67
TARDBP-218ENST00000617172 GCOM2Q9BZD3 368 aaPredicted RBP10.87□□□□□ -0.67
TARDBP-218ENST00000617172 KCNMB3Q9NPA1 279 aa10.87□□□□□ -0.67
TARDBP-218ENST00000617172 CHST12Q9NRB3 414 aa10.87□□□□□ -0.67
TARDBP-218ENST00000617172 DACT1Q9NYF0 836 aa10.87□□□□□ -0.67
TARDBP-218ENST00000617172 SEPT9Q9UHD8 586 aaPredicted RBP10.87□□□□□ -0.67
TARDBP-218ENST00000617172 IGKV6-21A0A0C4DH24 114 aa10.86□□□□□ -0.67
TARDBP-218ENST00000617172 GRXCR2A6NFK2 248 aa10.86□□□□□ -0.67
TARDBP-218ENST00000617172 TBKBP1A7MCY6 615 aa10.86□□□□□ -0.67
TARDBP-218ENST00000617172 SLC37A4O43826 429 aa10.86□□□□□ -0.67
TARDBP-218ENST00000617172 MGEA5O60502 916 aa10.86□□□□□ -0.67
TARDBP-218ENST00000617172 MAFO75444 373 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms