RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 SORBS3O60504 671 aa13.58□□□□□ -0.24
MSH6-213ENST00000614496 STX2P32856 288 aa13.58□□□□□ -0.24
MSH6-213ENST00000614496 FRMD5Q7Z6J6 570 aa13.58□□□□□ -0.24
MSH6-213ENST00000614496 TRIM59Q8IWR1 403 aa13.58□□□□□ -0.24
MSH6-213ENST00000614496 GDAP1Q8TB36 358 aa13.58□□□□□ -0.24
MSH6-213ENST00000614496 RUBCNQ92622 972 aa13.58□□□□□ -0.24
MSH6-213ENST00000614496 CAVIN3Q969G5 261 aa13.58□□□□□ -0.24
MSH6-213ENST00000614496 OSGEPQ9NPF4 335 aa13.58□□□□□ -0.24
MSH6-213ENST00000614496 RASSF10A6NK89 507 aa13.58□□□□□ -0.24
MSH6-213ENST00000614496 TCP10L2B9ZVM9 353 aa13.58□□□□□ -0.24
MSH6-213ENST00000614496 RPS6KA5O75582 802 aa13.58□□□□□ -0.24
MSH6-213ENST00000614496 BMP3P12645 472 aa13.58□□□□□ -0.24
MSH6-213ENST00000614496 ADCY8P40145 1251 aa13.58□□□□□ -0.24
MSH6-213ENST00000614496 NT5C2P49902 561 aa13.58□□□□□ -0.24
MSH6-213ENST00000614496 KDM7AQ6ZMT4 941 aa13.58□□□□□ -0.24
MSH6-213ENST00000614496 FMNL3Q8IVF7 1028 aa13.58□□□□□ -0.24
MSH6-213ENST00000614496 THOC1Q96FV9 657 aaKnown RBP13.58□□□□□ -0.24
MSH6-213ENST00000614496 ZNF577Q9BSK1 485 aa13.58□□□□□ -0.24
MSH6-213ENST00000614496 ODF2LQ9ULJ1 636 aa13.58□□□□□ -0.24
MSH6-213ENST00000614496 DCCP43146 1447 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 RASGRF2O14827 1237 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 ECM1Q16610 540 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 SLC35G1Q2M3R5 365 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 SYDE2Q5VT97 1194 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 TPCN2Q8NHX9 752 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 EIF2AK1Q9BQI3 630 aaKnown RBP13.57□□□□□ -0.24
MSH6-213ENST00000614496 ARHGEF10LQ9HCE6 1279 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 CD248Q9HCU0 757 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 HOMER3Q9NSC5 361 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 HAUS2Q9NVX0 235 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 LARSQ9P2J5 1176 aaKnown RBP13.57□□□□□ -0.24
MSH6-213ENST00000614496 LOC102724159A0A0B4J2E5 919 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 F5H6K3 240 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 GH2P01242 217 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 POLR2MP0CAP2 368 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 GAP43P17677 238 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 FGFR4P22455 802 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 PON1P27169 355 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 KLRC3Q07444 240 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 TRAF1Q13077 416 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 PWP2Q15269 919 aaKnown RBP13.57□□□□□ -0.24
MSH6-213ENST00000614496 PPP2R5EQ16537 467 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 SLC10A5Q5PT55 438 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 TAB3Q8N5C8 712 aaPredicted RBP13.57□□□□□ -0.24
MSH6-213ENST00000614496 FAM212AQ96EL1 285 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 MTMR9Q96QG7 549 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 RIOX1Q9H6W3 641 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 KLC4Q9NSK0 619 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 AKAP3O75969 853 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 FTLP02792 175 aaPredicted RBP13.57□□□□□ -0.24
MSH6-213ENST00000614496 PMS2P54278 862 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 PTF1AQ7RTS3 328 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 TBC1D16Q8TBP0 767 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 HVCN1Q96D96 273 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 THAP12O43422 761 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 FAM102BQ5T8I3 360 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 PPP4R3AQ6IN85 833 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 INTS8Q75QN2 995 aaKnown RBP13.57□□□□□ -0.24
MSH6-213ENST00000614496 VSIG1Q86XK7 387 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 BANK1Q8NDB2 785 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 RSRC1Q96IZ7 334 aaKnown RBP13.57□□□□□ -0.24
MSH6-213ENST00000614496 PARP2Q9UGN5 583 aa13.57□□□□□ -0.24
MSH6-213ENST00000614496 PJA2O43164 708 aa13.56□□□□□ -0.24
MSH6-213ENST00000614496 FAM107AO95990 144 aa13.56□□□□□ -0.24
MSH6-213ENST00000614496 SOX5P35711 763 aa13.56□□□□□ -0.24
MSH6-213ENST00000614496 CASP5P51878 434 aa13.56□□□□□ -0.24
MSH6-213ENST00000614496 KIFAP3Q92845 792 aa13.56□□□□□ -0.24
MSH6-213ENST00000614496 CLRN2A0PK11 232 aa13.56□□□□□ -0.24
MSH6-213ENST00000614496 PDXKO00764 312 aa13.56□□□□□ -0.24
MSH6-213ENST00000614496 CHUKO15111 745 aa13.56□□□□□ -0.24
MSH6-213ENST00000614496 TLR2O60603 784 aa13.56□□□□□ -0.24
MSH6-213ENST00000614496 SLC20A2Q08357 652 aa13.56□□□□□ -0.24
MSH6-213ENST00000614496 EDRF1Q3B7T1 1238 aa13.56□□□□□ -0.24
MSH6-213ENST00000614496 PRR5LQ6MZQ0 368 aa13.56□□□□□ -0.24
MSH6-213ENST00000614496 RFFLQ8WZ73 363 aa13.56□□□□□ -0.24
MSH6-213ENST00000614496 SYN2Q92777 582 aaPredicted RBP13.56□□□□□ -0.24
MSH6-213ENST00000614496 SLITRK6Q9H5Y7 841 aa13.56□□□□□ -0.24
MSH6-213ENST00000614496 PASKQ96RG2 1323 aa13.56□□□□□ -0.24
MSH6-213ENST00000614496 GUCY2CP25092 1073 aa13.56□□□□□ -0.24
MSH6-213ENST00000614496 ITIH3Q06033 890 aa13.56□□□□□ -0.24
MSH6-213ENST00000614496 CYP4F22Q6NT55 531 aa13.56□□□□□ -0.24
MSH6-213ENST00000614496 PPP1R18Q6NYC8 613 aa13.56□□□□□ -0.24
MSH6-213ENST00000614496 INTS2Q9H0H0 1204 aaKnown RBP13.56□□□□□ -0.24
MSH6-213ENST00000614496 ACTR5Q9H9F9 607 aaPredicted RBP13.56□□□□□ -0.24
MSH6-213ENST00000614496 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.56□□□□□ -0.24
MSH6-213ENST00000614496 USP21Q9UK80 565 aa13.56□□□□□ -0.24
MSH6-213ENST00000614496 STK24Q9Y6E0 443 aa13.56□□□□□ -0.24
MSH6-213ENST00000614496 MYH10P35580 1976 aa13.56□□□□□ -0.24
MSH6-213ENST00000614496 KCNJ1P48048 391 aa13.55□□□□□ -0.24
MSH6-213ENST00000614496 UAP1Q16222 522 aaPredicted RBP13.55□□□□□ -0.24
MSH6-213ENST00000614496 ZNF662Q6ZS27 426 aa13.55□□□□□ -0.24
MSH6-213ENST00000614496 SEC16BQ96JE7 1060 aa13.55□□□□□ -0.24
MSH6-213ENST00000614496 CSRNP1Q96S65 589 aa13.55□□□□□ -0.24
MSH6-213ENST00000614496 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.55□□□□□ -0.24
MSH6-213ENST00000614496 UBAP1LF5GYI3 381 aa13.55□□□□□ -0.24
MSH6-213ENST00000614496 ATMINO43313 823 aaPredicted RBP13.55□□□□□ -0.24
MSH6-213ENST00000614496 ABCB11O95342 1321 aa13.55□□□□□ -0.24
MSH6-213ENST00000614496 KRT15P19012 456 aa13.55□□□□□ -0.24
MSH6-213ENST00000614496 EIF3BP55884 814 aaKnown RBP13.55□□□□□ -0.24
MSH6-213ENST00000614496 LACTBP83111 547 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms