RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 GFPT1Q06210 699 aaPredicted RBP13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 NAA35Q5VZE5 725 aa13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 LDHDQ86WU2 507 aa13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 ANKRD13CQ8N6S4 541 aa13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 ARL8AQ96BM9 186 aa13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 REEP2Q9BRK0 252 aa13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 LSM14BQ9BX40 385 aaKnown RBP13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 JADE2Q9NQC1 790 aa13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 SNX12Q9UMY4 172 aa13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 MRPL11Q9Y3B7 192 aaKnown RBP13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 ASTN2O75129 1339 aaPredicted RBP13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 FRMD3A2A2Y4 597 aa13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 RSPH10B2B2RC85 870 aa13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 NOL4O94818 638 aa13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 RSPH10BP0C881 870 aa13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 LSP1P33241 339 aa13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 ZNF280AP59817 542 aaPredicted RBP13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 NBPF20Q3BBV1 942 aa13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 TDRD12Q587J7 1177 aaKnown RBP13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 TTC19Q6DKK2 380 aaPredicted RBP13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 SFR1Q86XK3 245 aa13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 CCDC50Q8IVM0 306 aa13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 C1orf131Q8NDD1 294 aaKnown RBP13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 MIEF2Q96C03 454 aa13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 IQCDQ96DY2 449 aa13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 BRCA1P38398 1863 aaKnown RBP13.8□□□□□ -0.2
PCDHGA4-202ENST00000612927 DGKZQ13574 1117 aa13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 CREG2Q8IUH2 290 aa13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 TRIM59Q8IWR1 403 aa13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 SYT2Q8N9I0 419 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 EIF2AK1Q9BQI3 630 aaKnown RBP13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 CD248Q9HCU0 757 aa13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 RGL1Q9NZL6 768 aa13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 STIM2Q9P246 746 aa13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 DNM3Q9UQ16 869 aa13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 ATAD5Q96QE3 1844 aa13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 CCDC189A1A4V9 331 aa13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 PTGER2P43116 358 aa13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 POLR2FP61218 127 aaKnown RBP13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 GIT2Q14161 759 aa13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 TNIP1Q15025 636 aa13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 HGSNATQ68CP4 663 aa13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 FOXR2Q6PJQ5 311 aa13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 TRIM58Q8NG06 486 aa13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 MAGEC3Q8TD91 643 aa13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 ZNF473Q8WTR7 871 aaKnown RBP13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 AGBL1Q96MI9 1066 aa13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 PSMB7Q99436 277 aa13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 LRRC1Q9BTT6 524 aa13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 ACTR5Q9H9F9 607 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 SALL4Q9UJQ4 1053 aa13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 PITPNM2Q9BZ72 1349 aa13.79□□□□□ -0.2
PCDHGA4-202ENST00000612927 TLR2O60603 784 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 PPP1R37O75864 691 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 MYBP10242 640 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 NR2F2P24468 414 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 POLD1P28340 1107 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 CDR1P51861 262 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 ADAM9Q13443 819 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 ENOX2Q16206 610 aaKnown RBP13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 CCDC13Q8IYE1 715 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 TSEN2Q8NCE0 465 aaKnown RBP13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 CEP63Q96MT8 703 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 RUSC1Q9BVN2 902 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 BHMT2Q9H2M3 363 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 DMGDHQ9UI17 866 aaKnown RBP13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 CHMP2AO43633 222 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 HOXD13P35453 343 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 RASSF7Q02833 373 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 ARID5AQ03989 594 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 PTGISQ16647 500 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 GLE1Q53GS7 698 aaKnown RBP13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 CEP85LQ5SZL2 805 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 SAMD7Q7Z3H4 446 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 CD302Q8IX05 232 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 SPATA4Q8NEY3 305 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 N4BP2L2Q92802 583 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 ZIM3Q96PE6 472 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 POLR3CQ9BUI4 534 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 ODF2LQ9ULJ1 636 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 ZNF536O15090 1300 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 UTRNP46939 3433 aa13.78□□□□□ -0.2
PCDHGA4-202ENST00000612927 GOLGA6L7A0A1B0GV03 622 aa13.77□□□□□ -0.2
PCDHGA4-202ENST00000612927 IRF6O14896 467 aa13.77□□□□□ -0.2
PCDHGA4-202ENST00000612927 USO1O60763 962 aaKnown RBP13.77□□□□□ -0.2
PCDHGA4-202ENST00000612927 PSMD10O75832 226 aa13.77□□□□□ -0.2
PCDHGA4-202ENST00000612927 MAGEA1P43355 309 aa13.77□□□□□ -0.2
PCDHGA4-202ENST00000612927 GMPSP49915 693 aaPredicted RBP13.77□□□□□ -0.2
PCDHGA4-202ENST00000612927 LRCH2Q5VUJ6 765 aa13.77□□□□□ -0.2
PCDHGA4-202ENST00000612927 OTOP1Q7RTM1 612 aa13.77□□□□□ -0.2
PCDHGA4-202ENST00000612927 C3orf20Q8ND61 904 aa13.77□□□□□ -0.2
PCDHGA4-202ENST00000612927 SLC5A5Q92911 643 aa13.77□□□□□ -0.2
PCDHGA4-202ENST00000612927 CEP72Q9P209 647 aa13.77□□□□□ -0.2
PCDHGA4-202ENST00000612927 CCPG1Q9ULG6 757 aa13.77□□□□□ -0.2
PCDHGA4-202ENST00000612927 BCS1LQ9Y276 419 aa13.77□□□□□ -0.2
PCDHGA4-202ENST00000612927 STK24Q9Y6E0 443 aa13.77□□□□□ -0.2
PCDHGA4-202ENST00000612927 NCK2O43639 380 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 LCA5LO95447 670 aa13.77□□□□□ -0.21
PCDHGA4-202ENST00000612927 TCP1P17987 556 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms