RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 CALUO43852 315 aaPredicted RBP11.77□□□□□ -0.53
FAM3A-221ENST00000612856 PPP1R7Q15435 360 aa11.77□□□□□ -0.53
FAM3A-221ENST00000612856 SNCBQ16143 134 aa11.77□□□□□ -0.53
FAM3A-221ENST00000612856 CNGA4Q8IV77 575 aa11.77□□□□□ -0.53
FAM3A-221ENST00000612856 GLYCTKQ8IVS8 523 aa11.77□□□□□ -0.53
FAM3A-221ENST00000612856 SAAL1Q96ER3 474 aa11.77□□□□□ -0.53
FAM3A-221ENST00000612856 ZFYVE28Q9HCC9 887 aa11.77□□□□□ -0.53
FAM3A-221ENST00000612856 TRIM10Q9UDY6 481 aa11.77□□□□□ -0.53
FAM3A-221ENST00000612856 SLIT2O94813 1529 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 KDM3AQ9Y4C1 1321 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 TMEM150BA6NC51 233 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 IKBKBO14920 756 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 VIL1P09327 827 aaKnown RBP11.76□□□□□ -0.53
FAM3A-221ENST00000612856 CHRM1P11229 460 aaPredicted RBP11.76□□□□□ -0.53
FAM3A-221ENST00000612856 CETN2P41208 172 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 POLR2FP61218 127 aaKnown RBP11.76□□□□□ -0.53
FAM3A-221ENST00000612856 MORC3Q14149 939 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 TTLL4Q14679 1199 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 PADI6Q6TGC4 694 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 METTL16Q86W50 562 aaKnown RBP11.76□□□□□ -0.53
FAM3A-221ENST00000612856 SFR1Q86XK3 245 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 TCP11Q8WWU5 503 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 ADGRG1Q9Y653 693 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 COL1A1P02452 1464 aaPredicted RBP11.76□□□□□ -0.53
FAM3A-221ENST00000612856 SMIM23A6NLE4 172 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 ADAMTS3O15072 1205 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 PSAPP07602 524 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 CETPP11597 493 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 RAD9BQ6WBX8 426 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 ADAT2Q7Z6V5 191 aaKnown RBP11.76□□□□□ -0.53
FAM3A-221ENST00000612856 TRIM50Q86XT4 487 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 SPDL1Q96EA4 605 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 THOC1Q96FV9 657 aaKnown RBP11.76□□□□□ -0.53
FAM3A-221ENST00000612856 KIFC3Q9BVG8 833 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 TNFAIP3P21580 790 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 CYLC1P35663 651 aaPredicted RBP11.76□□□□□ -0.53
FAM3A-221ENST00000612856 KIF5AQ12840 1032 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 PTPAQ15257 358 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 SEZ6Q53EL9 994 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 SUGP1Q8IWZ8 645 aaKnown RBP11.76□□□□□ -0.53
FAM3A-221ENST00000612856 TC2NQ8N9U0 490 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 CDHR1Q96JP9 859 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 LSM14BQ9BX40 385 aaKnown RBP11.76□□□□□ -0.53
FAM3A-221ENST00000612856 KLC4Q9NSK0 619 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 EMILIN3Q9NT22 766 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 LRP6O75581 1613 aa11.76□□□□□ -0.53
FAM3A-221ENST00000612856 WDR19Q8NEZ3 1342 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 A0A1W2PRG0 241 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 KCNJ18B7U540 433 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 MAP2K7O14733 419 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 SEC24CP53992 1094 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 GUCY1A3Q02108 690 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 KCNJ12Q14500 433 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 PPP1R18Q6NYC8 613 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 SPATS2LQ9NUQ6 558 aaKnown RBP11.75□□□□□ -0.53
FAM3A-221ENST00000612856 IRAK4Q9NWZ3 460 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 MAD2L2Q9UI95 211 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 TJP1Q07157 1748 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 MYO5AQ9Y4I1 1855 aaKnown RBP11.75□□□□□ -0.53
FAM3A-221ENST00000612856 FAM205AQ6ZU69 1335 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 GTPBP6O43824 516 aaPredicted RBP11.75□□□□□ -0.53
FAM3A-221ENST00000612856 ONECUT3O60422 494 aaPredicted RBP11.75□□□□□ -0.53
FAM3A-221ENST00000612856 SOX10P56693 466 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 KIAA1841Q6NSI8 718 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 ILDR2Q71H61 639 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 OR6J1Q8NGC5 347 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 LPAR1Q92633 364 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 PARK7Q99497 189 aaKnown RBP11.75□□□□□ -0.53
FAM3A-221ENST00000612856 PARVGQ9HBI0 331 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 SRPRBQ9Y5M8 271 aaKnown RBP11.75□□□□□ -0.53
FAM3A-221ENST00000612856 WDR64B1ANS9 1081 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 C19orf81C9J6K1 198 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 KRT86O43790 486 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 MYBL1P10243 752 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 GCFC2P16383 781 aaKnown RBP11.75□□□□□ -0.53
FAM3A-221ENST00000612856 VAV2P52735 878 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 HERVK_113P62684 666 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 HDLBPQ00341 1268 aaKnown RBP11.75□□□□□ -0.53
FAM3A-221ENST00000612856 PKN1Q16512 942 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 FAM43BQ6ZT52 329 aaPredicted RBP11.75□□□□□ -0.53
FAM3A-221ENST00000612856 RNF149Q8NC42 400 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 TRIM17Q9Y577 477 aa11.75□□□□□ -0.53
FAM3A-221ENST00000612856 GLI3P10071 1580 aa11.74□□□□□ -0.53
FAM3A-221ENST00000612856 N4BP2Q86UW6 1770 aaPredicted RBP11.74□□□□□ -0.53
FAM3A-221ENST00000612856 FANCGO15287 622 aa11.74□□□□□ -0.53
FAM3A-221ENST00000612856 PPP6R2O75170 966 aa11.74□□□□□ -0.53
FAM3A-221ENST00000612856 NMT1P30419 496 aaKnown RBP11.74□□□□□ -0.53
FAM3A-221ENST00000612856 TUBB4BP68371 445 aa11.74□□□□□ -0.53
FAM3A-221ENST00000612856 IFFO1Q0D2I5 559 aa11.74□□□□□ -0.53
FAM3A-221ENST00000612856 KLHL30Q0D2K2 578 aa11.74□□□□□ -0.53
FAM3A-221ENST00000612856 PPP2R5DQ14738 602 aa11.74□□□□□ -0.53
FAM3A-221ENST00000612856 RESP18Q5W5W9 173 aa11.74□□□□□ -0.53
FAM3A-221ENST00000612856 RETREG2Q8NC44 543 aa11.74□□□□□ -0.53
FAM3A-221ENST00000612856 MAN1B1Q9UKM7 699 aa11.74□□□□□ -0.53
FAM3A-221ENST00000612856 TUBGCP6Q96RT7 1819 aa11.74□□□□□ -0.53
FAM3A-221ENST00000612856 CDC25CP30307 473 aa11.74□□□□□ -0.53
FAM3A-221ENST00000612856 STAT5BP51692 787 aa11.74□□□□□ -0.53
FAM3A-221ENST00000612856 NCAPHQ15003 741 aa11.74□□□□□ -0.53
FAM3A-221ENST00000612856 COG1Q8WTW3 980 aa11.74□□□□□ -0.53
FAM3A-221ENST00000612856 ZNF653Q96CK0 615 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms