RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 DCNP07585 359 aaKnown RBP11.83□□□□□ -0.52
SSX3-204ENST00000612497 EPCAMP16422 314 aa11.83□□□□□ -0.52
SSX3-204ENST00000612497 COL9A2Q14055 689 aaPredicted RBP11.83□□□□□ -0.52
SSX3-204ENST00000612497 ODR4Q5SWX8 454 aa11.83□□□□□ -0.52
SSX3-204ENST00000612497 PCNX4Q63HM2 1172 aa11.83□□□□□ -0.52
SSX3-204ENST00000612497 FAM43BQ6ZT52 329 aaPredicted RBP11.83□□□□□ -0.52
SSX3-204ENST00000612497 CABP7Q86V35 215 aa11.83□□□□□ -0.52
SSX3-204ENST00000612497 C1orf210Q8IVY1 113 aa11.83□□□□□ -0.52
SSX3-204ENST00000612497 ABI1Q8IZP0 508 aa11.83□□□□□ -0.52
SSX3-204ENST00000612497 TNPO1Q92973 898 aaKnown RBP11.83□□□□□ -0.52
SSX3-204ENST00000612497 EVI5LQ96CN4 794 aa11.83□□□□□ -0.52
SSX3-204ENST00000612497 PIGSQ96S52 555 aa11.83□□□□□ -0.52
SSX3-204ENST00000612497 PKD2L1Q9P0L9 805 aa11.83□□□□□ -0.52
SSX3-204ENST00000612497 RALYQ9UKM9 306 aaKnown RBP11.83□□□□□ -0.52
SSX3-204ENST00000612497 CA14Q9ULX7 337 aa11.83□□□□□ -0.52
SSX3-204ENST00000612497 ST3GAL5Q9UNP4 418 aa11.83□□□□□ -0.52
SSX3-204ENST00000612497 C2orf16Q68DN1 1984 aa11.83□□□□□ -0.52
SSX3-204ENST00000612497 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.82□□□□□ -0.52
SSX3-204ENST00000612497 SMIM35A0A1B0GVV1 85 aa11.82□□□□□ -0.52
SSX3-204ENST00000612497 CCER2I3L3R5 266 aa11.82□□□□□ -0.52
SSX3-204ENST00000612497 GPR182O15218 404 aa11.82□□□□□ -0.52
SSX3-204ENST00000612497 KCNA2P16389 499 aa11.82□□□□□ -0.52
SSX3-204ENST00000612497 MX1P20591 662 aa11.82□□□□□ -0.52
SSX3-204ENST00000612497 PLCB4Q15147 1175 aa11.82□□□□□ -0.52
SSX3-204ENST00000612497 VARS2Q5ST30 1063 aaKnown RBP11.82□□□□□ -0.52
SSX3-204ENST00000612497 ZNF589Q86UQ0 364 aaPredicted RBP11.82□□□□□ -0.52
SSX3-204ENST00000612497 LRRC43Q8N309 656 aa11.82□□□□□ -0.52
SSX3-204ENST00000612497 GPR161Q8N6U8 529 aaKnown RBP11.82□□□□□ -0.52
SSX3-204ENST00000612497 FEZF2Q8TBJ5 459 aa11.82□□□□□ -0.52
SSX3-204ENST00000612497 CASD1Q96PB1 797 aa11.82□□□□□ -0.52
SSX3-204ENST00000612497 AZI2Q9H6S1 392 aa11.82□□□□□ -0.52
SSX3-204ENST00000612497 ELAC1Q9H777 363 aaKnown RBP11.82□□□□□ -0.52
SSX3-204ENST00000612497 CDHR5Q9HBB8 845 aa11.82□□□□□ -0.52
SSX3-204ENST00000612497 ZSWIM5Q9P217 1185 aa11.82□□□□□ -0.52
SSX3-204ENST00000612497 IGSF9Q9P2J2 1179 aa11.82□□□□□ -0.52
SSX3-204ENST00000612497 SIT1Q9Y3P8 196 aa11.82□□□□□ -0.52
SSX3-204ENST00000612497 PRR5-ARHGAP8B1AHC4 643 aa11.81□□□□□ -0.52
SSX3-204ENST00000612497 HAX1O00165 279 aa11.81□□□□□ -0.52
SSX3-204ENST00000612497 HOXA2O43364 376 aa11.81□□□□□ -0.52
SSX3-204ENST00000612497 ADRB1P08588 477 aa11.81□□□□□ -0.52
SSX3-204ENST00000612497 NT5C2P49902 561 aa11.81□□□□□ -0.52
SSX3-204ENST00000612497 METAP2P50579 478 aaKnown RBP eCLIP11.81□□□□□ -0.52
SSX3-204ENST00000612497 FAM189BP81408 668 aa11.81□□□□□ -0.52
SSX3-204ENST00000612497 ARHGAP8P85298 464 aa11.81□□□□□ -0.52
SSX3-204ENST00000612497 LMNB2Q03252 620 aa11.81□□□□□ -0.52
SSX3-204ENST00000612497 NONOQ15233 471 aaKnown RBP eCLIP11.81□□□□□ -0.52
SSX3-204ENST00000612497 IFIT1BQ5T764 474 aaKnown RBP11.81□□□□□ -0.52
SSX3-204ENST00000612497 GPR149Q86SP6 731 aa11.81□□□□□ -0.52
SSX3-204ENST00000612497 SLC39A11Q8N1S5 342 aa11.81□□□□□ -0.52
SSX3-204ENST00000612497 SMARCC2Q8TAQ2 1214 aa11.81□□□□□ -0.52
SSX3-204ENST00000612497 SLC22A17Q8WUG5 538 aa11.81□□□□□ -0.52
SSX3-204ENST00000612497 TMEM40Q8WWA1 233 aa11.81□□□□□ -0.52
SSX3-204ENST00000612497 RSAD2Q8WXG1 361 aa11.81□□□□□ -0.52
SSX3-204ENST00000612497 AUTS2Q8WXX7 1259 aa11.81□□□□□ -0.52
SSX3-204ENST00000612497 SECISBP2LQ93073 1101 aaKnown RBP11.81□□□□□ -0.52
SSX3-204ENST00000612497 CDHR1Q96JP9 859 aa11.81□□□□□ -0.52
SSX3-204ENST00000612497 UBAC1Q9BSL1 405 aa11.81□□□□□ -0.52
SSX3-204ENST00000612497 SFXN1Q9H9B4 322 aa11.81□□□□□ -0.52
SSX3-204ENST00000612497 MAD2L2Q9UI95 211 aa11.81□□□□□ -0.52
SSX3-204ENST00000612497 FAM208BQ5VWN6 2430 aa11.8□□□□□ -0.52
SSX3-204ENST00000612497 PNMA6FA0A0J9YX94 578 aa11.8□□□□□ -0.52
SSX3-204ENST00000612497 NT5C1B-RDH14C9J2C7 533 aa11.8□□□□□ -0.52
SSX3-204ENST00000612497 KLRC1P26715 233 aa11.8□□□□□ -0.52
SSX3-204ENST00000612497 HNRNPUQ00839 825 aaKnown RBP eCLIP11.8□□□□□ -0.52
SSX3-204ENST00000612497 NMIQ13287 307 aaPredicted RBP11.8□□□□□ -0.52
SSX3-204ENST00000612497 LETM2Q2VYF4 491 aa11.8□□□□□ -0.52
SSX3-204ENST00000612497 MTHFD1LQ6UB35 978 aa11.8□□□□□ -0.52
SSX3-204ENST00000612497 VPS52Q8N1B4 723 aa11.8□□□□□ -0.52
SSX3-204ENST00000612497 RNF169Q8NCN4 708 aa11.8□□□□□ -0.52
SSX3-204ENST00000612497 CUL5Q93034 780 aa11.8□□□□□ -0.52
SSX3-204ENST00000612497 GPRASP2Q96D09 838 aa11.8□□□□□ -0.52
SSX3-204ENST00000612497 PPP1R16BQ96T49 567 aa11.8□□□□□ -0.52
SSX3-204ENST00000612497 PCYT2Q99447 389 aa11.8□□□□□ -0.52
SSX3-204ENST00000612497 RTKNQ9BST9 563 aa11.8□□□□□ -0.52
SSX3-204ENST00000612497 RNF19AQ9NV58 838 aa11.8□□□□□ -0.52
SSX3-204ENST00000612497 MIA3Q5JRA6 1907 aa11.8□□□□□ -0.52
SSX3-204ENST00000612497 LAMA4Q16363 1823 aa11.79□□□□□ -0.52
SSX3-204ENST00000612497 PALM3A6NDB9 673 aaPredicted RBP11.79□□□□□ -0.52
SSX3-204ENST00000612497 POTEMA6NI47 508 aa11.79□□□□□ -0.52
SSX3-204ENST00000612497 GBP2P32456 591 aaPredicted RBP11.79□□□□□ -0.52
SSX3-204ENST00000612497 ALDH7A1P49419 539 aaKnown RBP11.79□□□□□ -0.52
SSX3-204ENST00000612497 SLC35G1Q2M3R5 365 aa11.79□□□□□ -0.52
SSX3-204ENST00000612497 PHLDB3Q6NSJ2 640 aa11.79□□□□□ -0.52
SSX3-204ENST00000612497 USP17L6PQ6QN14 398 aa11.79□□□□□ -0.52
SSX3-204ENST00000612497 POTEGQ6S5H5 508 aa11.79□□□□□ -0.52
SSX3-204ENST00000612497 SLC44A3Q8N4M1 653 aa11.79□□□□□ -0.52
SSX3-204ENST00000612497 PIBF1Q8WXW3 757 aa11.79□□□□□ -0.52
SSX3-204ENST00000612497 TMEM169Q96HH4 297 aa11.79□□□□□ -0.52
SSX3-204ENST00000612497 RIOX1Q9H6W3 641 aa11.79□□□□□ -0.52
SSX3-204ENST00000612497 DLGAP2Q9P1A6 1054 aa11.79□□□□□ -0.52
SSX3-204ENST00000612497 USP18Q9UMW8 372 aa11.79□□□□□ -0.52
SSX3-204ENST00000612497 SPTLC1O15269 473 aa11.78□□□□□ -0.52
SSX3-204ENST00000612497 SRFP11831 508 aa11.78□□□□□ -0.52
SSX3-204ENST00000612497 ITGB5P18084 799 aa11.78□□□□□ -0.52
SSX3-204ENST00000612497 STAT5BP51692 787 aa11.78□□□□□ -0.52
SSX3-204ENST00000612497 BCAR1P56945 870 aa11.78□□□□□ -0.52
SSX3-204ENST00000612497 MTMR1Q13613 665 aa11.78□□□□□ -0.52
SSX3-204ENST00000612497 GIT2Q14161 759 aa11.78□□□□□ -0.52
SSX3-204ENST00000612497 DSC3Q14574 896 aa11.78□□□□□ -0.52
SSX3-204ENST00000612497 FAM228AQ86W67 206 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms