RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 MIER3Q7Z3K6 550 aa11.22□□□□□ -0.61
CTCFL-216ENST00000608263 TBC1D1Q86TI0 1168 aaPredicted RBP11.22□□□□□ -0.61
CTCFL-216ENST00000608263 FBF1Q8TES7 1133 aa11.22□□□□□ -0.61
CTCFL-216ENST00000608263 STMN4Q9H169 189 aaPredicted RBP11.22□□□□□ -0.61
CTCFL-216ENST00000608263 GLT8D2Q9H1C3 349 aa11.22□□□□□ -0.61
CTCFL-216ENST00000608263 BZW2Q9Y6E2 419 aaKnown RBP11.22□□□□□ -0.61
CTCFL-216ENST00000608263 PALM3A6NDB9 673 aaPredicted RBP11.22□□□□□ -0.61
CTCFL-216ENST00000608263 RSPH10B2B2RC85 870 aa11.22□□□□□ -0.61
CTCFL-216ENST00000608263 SYF2O95926 243 aaKnown RBP11.22□□□□□ -0.61
CTCFL-216ENST00000608263 RSPH10BP0C881 870 aa11.22□□□□□ -0.61
CTCFL-216ENST00000608263 UCHL3P15374 230 aa11.22□□□□□ -0.61
CTCFL-216ENST00000608263 GCFC2P16383 781 aaKnown RBP11.22□□□□□ -0.61
CTCFL-216ENST00000608263 KRT15P19012 456 aa11.22□□□□□ -0.61
CTCFL-216ENST00000608263 EIF2AK2P19525 551 aaKnown RBP11.22□□□□□ -0.61
CTCFL-216ENST00000608263 STX2P32856 288 aa11.22□□□□□ -0.61
CTCFL-216ENST00000608263 CORO7P57737 925 aa11.22□□□□□ -0.61
CTCFL-216ENST00000608263 MDM1Q8TC05 714 aa11.22□□□□□ -0.61
CTCFL-216ENST00000608263 CASKIN2Q8WXE0 1202 aa11.22□□□□□ -0.61
CTCFL-216ENST00000608263 PBKQ96KB5 322 aa11.22□□□□□ -0.61
CTCFL-216ENST00000608263 FNBP1Q96RU3 617 aa11.22□□□□□ -0.61
CTCFL-216ENST00000608263 DHX36Q9H2U1 1008 aaKnown RBP11.22□□□□□ -0.61
CTCFL-216ENST00000608263 AZI2Q9H6S1 392 aa11.22□□□□□ -0.61
CTCFL-216ENST00000608263 HMGB1P1B2RPK0 211 aaPredicted RBP11.22□□□□□ -0.61
CTCFL-216ENST00000608263 KLRC4O43908 158 aa11.22□□□□□ -0.61
CTCFL-216ENST00000608263 RASA3Q14644 834 aa11.22□□□□□ -0.61
CTCFL-216ENST00000608263 TRADDQ15628 312 aa11.22□□□□□ -0.61
CTCFL-216ENST00000608263 SLC51AQ86UW1 340 aa11.22□□□□□ -0.61
CTCFL-216ENST00000608263 SHISA4Q96DD7 197 aa11.22□□□□□ -0.61
CTCFL-216ENST00000608263 SYNCQ9H7C4 482 aa11.22□□□□□ -0.61
CTCFL-216ENST00000608263 EFCC1Q9HA90 598 aa11.22□□□□□ -0.61
CTCFL-216ENST00000608263 TNNI1P19237 187 aa11.21□□□□□ -0.61
CTCFL-216ENST00000608263 CCDC6Q16204 474 aa11.21□□□□□ -0.61
CTCFL-216ENST00000608263 APTXQ7Z2E3 356 aaKnown RBP11.21□□□□□ -0.61
CTCFL-216ENST00000608263 CREG2Q8IUH2 290 aa11.21□□□□□ -0.61
CTCFL-216ENST00000608263 ZNF653Q96CK0 615 aa11.21□□□□□ -0.61
CTCFL-216ENST00000608263 LRRC4BQ9NT99 713 aa11.21□□□□□ -0.61
CTCFL-216ENST00000608263 POLR2MP0CAP2 368 aa11.21□□□□□ -0.61
CTCFL-216ENST00000608263 CASP4P49662 377 aa11.21□□□□□ -0.61
CTCFL-216ENST00000608263 HP1BP3Q5SSJ5 553 aaPredicted RBP11.21□□□□□ -0.61
CTCFL-216ENST00000608263 CENPPQ6IPU0 288 aa11.21□□□□□ -0.61
CTCFL-216ENST00000608263 SEPT14Q6ZU15 432 aa11.21□□□□□ -0.61
CTCFL-216ENST00000608263 INTS8Q75QN2 995 aaKnown RBP11.21□□□□□ -0.61
CTCFL-216ENST00000608263 PACS2Q86VP3 889 aa11.21□□□□□ -0.61
CTCFL-216ENST00000608263 PROM2Q8N271 834 aa11.21□□□□□ -0.61
CTCFL-216ENST00000608263 MMGT1Q8N4V1 131 aa11.21□□□□□ -0.61
CTCFL-216ENST00000608263 TLR10Q9BXR5 811 aa11.21□□□□□ -0.61
CTCFL-216ENST00000608263 LTN1O94822 1766 aa11.21□□□□□ -0.62
CTCFL-216ENST00000608263 FMN2Q9NZ56 1722 aa11.21□□□□□ -0.62
CTCFL-216ENST00000608263 SSTR3P32745 418 aaPredicted RBP11.21□□□□□ -0.62
CTCFL-216ENST00000608263 GALCP54803 685 aa11.21□□□□□ -0.62
CTCFL-216ENST00000608263 AMPD2Q01433 879 aa11.21□□□□□ -0.62
CTCFL-216ENST00000608263 GLE1Q53GS7 698 aaKnown RBP11.21□□□□□ -0.62
CTCFL-216ENST00000608263 XKR9Q5GH70 373 aa11.21□□□□□ -0.62
CTCFL-216ENST00000608263 CCDC197Q8NCU1 140 aa11.21□□□□□ -0.62
CTCFL-216ENST00000608263 BANK1Q8NDB2 785 aa11.21□□□□□ -0.62
CTCFL-216ENST00000608263 ZNF507Q8TCN5 953 aa11.21□□□□□ -0.62
CTCFL-216ENST00000608263 ANKS1AQ92625 1134 aa11.21□□□□□ -0.62
CTCFL-216ENST00000608263 REEP2Q9BRK0 252 aa11.21□□□□□ -0.62
CTCFL-216ENST00000608263 ZNF577Q9BSK1 485 aa11.21□□□□□ -0.62
CTCFL-216ENST00000608263 JMJD4Q9H9V9 463 aa11.21□□□□□ -0.62
CTCFL-216ENST00000608263 PARVGQ9HBI0 331 aa11.21□□□□□ -0.62
CTCFL-216ENST00000608263 LARSQ9P2J5 1176 aaKnown RBP11.21□□□□□ -0.62
CTCFL-216ENST00000608263 POC1B-GALNT4F8VUJ3 575 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 THAP12O43422 761 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 ATF7P17544 494 aaPredicted RBP11.2□□□□□ -0.62
CTCFL-216ENST00000608263 LMNB1P20700 586 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 MCTP2Q6DN12 878 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 CCDC63Q8NA47 563 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 ZNF473Q8WTR7 871 aaKnown RBP11.2□□□□□ -0.62
CTCFL-216ENST00000608263 DYDC2Q96IM9 177 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 PPP1R16BQ96T49 567 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 FAM114A2Q9NRY5 505 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 ZNRF3Q9ULT6 936 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 DAGLAQ9Y4D2 1042 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 GMNCA6NCL1 334 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 MMEP08473 750 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 STAT2P52630 851 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 KCTD2Q14681 263 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 KLHDC7AQ5VTJ3 777 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 NEK9Q8TD19 979 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 HEMGNQ9BXL5 484 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 VPS37BQ9H9H4 285 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 IKBKGQ9Y6K9 419 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 COL5A2P05997 1499 aaPredicted RBP11.2□□□□□ -0.62
CTCFL-216ENST00000608263 SSU72P8A0A1W2PR75 194 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 ASNSP08243 561 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 MDH1P40925 334 aaKnown RBP11.2□□□□□ -0.62
CTCFL-216ENST00000608263 ZNF543Q08ER8 600 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 TAOK1Q7L7X3 1001 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 CEP63Q96MT8 703 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 PNMA5Q96PV4 448 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.2□□□□□ -0.622e-13■□□□□ 8.7
CTCFL-216ENST00000608263 BLOC1S4Q9NUP1 217 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 TRPC6Q9Y210 931 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 CEP83Q9Y592 693 aa11.2□□□□□ -0.62
CTCFL-216ENST00000608263 F5H6K3 240 aa11.19□□□□□ -0.62
CTCFL-216ENST00000608263 ZNF263O14978 683 aa11.19□□□□□ -0.62
CTCFL-216ENST00000608263 ITGA4P13612 1032 aa11.19□□□□□ -0.62
CTCFL-216ENST00000608263 FGFR4P22455 802 aa11.19□□□□□ -0.62
CTCFL-216ENST00000608263 KCNJ1P48048 391 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms