RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 AMFRQ9UKV5 643 aa13.48□□□□□ -0.25
CDCA3-212ENST00000604599 RTCBQ9Y3I0 505 aaKnown RBP13.48□□□□□ -0.25
CDCA3-212ENST00000604599 AHCYL1O43865 530 aa13.47□□□□□ -0.25
CDCA3-212ENST00000604599 UCHL3P15374 230 aa13.47□□□□□ -0.25
CDCA3-212ENST00000604599 PAPOLAP51003 745 aaKnown RBP13.47□□□□□ -0.25
CDCA3-212ENST00000604599 SLFN11Q7Z7L1 901 aa13.47□□□□□ -0.25
CDCA3-212ENST00000604599 COL23A1Q86Y22 540 aaPredicted RBP13.47□□□□□ -0.25
CDCA3-212ENST00000604599 JAMLQ86YT9 394 aa13.47□□□□□ -0.25
CDCA3-212ENST00000604599 GBP7Q8N8V2 638 aaPredicted RBP13.47□□□□□ -0.25
CDCA3-212ENST00000604599 GDAP1Q8TB36 358 aa13.47□□□□□ -0.25
CDCA3-212ENST00000604599 RBM46Q8TBY0 533 aaKnown RBP13.47□□□□□ -0.25
CDCA3-212ENST00000604599 U2AF1L4Q8WU68 220 aaKnown RBP13.47□□□□□ -0.25
CDCA3-212ENST00000604599 BIN2Q9UBW5 565 aaPredicted RBP13.47□□□□□ -0.25
CDCA3-212ENST00000604599 PAPPAQ13219 1627 aa13.47□□□□□ -0.25
CDCA3-212ENST00000604599 SMCO2A6NFE2 343 aa13.47□□□□□ -0.25
CDCA3-212ENST00000604599 FOXO6A8MYZ6 492 aa13.47□□□□□ -0.25
CDCA3-212ENST00000604599 RASGRF2O14827 1237 aa13.47□□□□□ -0.25
CDCA3-212ENST00000604599 HIP1RO75146 1068 aa13.47□□□□□ -0.25
CDCA3-212ENST00000604599 RPS6KA3P51812 740 aa13.47□□□□□ -0.25
CDCA3-212ENST00000604599 RNASELQ05823 741 aaKnown RBP13.47□□□□□ -0.25
CDCA3-212ENST00000604599 CALCRLQ16602 461 aa13.47□□□□□ -0.25
CDCA3-212ENST00000604599 KIAA1755Q5JYT7 1200 aa13.47□□□□□ -0.25
CDCA3-212ENST00000604599 GALNT17Q6IS24 598 aa13.47□□□□□ -0.25
CDCA3-212ENST00000604599 ANO7Q6IWH7 933 aa13.47□□□□□ -0.25
CDCA3-212ENST00000604599 ASRGL1Q7L266 308 aa13.47□□□□□ -0.25
CDCA3-212ENST00000604599 PIDD1Q9HB75 910 aa13.47□□□□□ -0.25
CDCA3-212ENST00000604599 ETNK1Q9HBU6 452 aa13.47□□□□□ -0.25
CDCA3-212ENST00000604599 TMEM260Q9NX78 707 aa13.47□□□□□ -0.25
CDCA3-212ENST00000604599 PPP1R9AQ9ULJ8 1098 aa13.47□□□□□ -0.25
CDCA3-212ENST00000604599 USP17L3A6NCW0 530 aa13.46□□□□□ -0.25
CDCA3-212ENST00000604599 USP17L4A6NCW7 530 aa13.46□□□□□ -0.25
CDCA3-212ENST00000604599 PCK1P35558 622 aa13.46□□□□□ -0.25
CDCA3-212ENST00000604599 IGHMBP2P38935 993 aaKnown RBP13.46□□□□□ -0.25
CDCA3-212ENST00000604599 MXRA7P84157 204 aa13.46□□□□□ -0.25
CDCA3-212ENST00000604599 MKRN4PQ13434 485 aaPredicted RBP13.46□□□□□ -0.25
CDCA3-212ENST00000604599 AUHQ13825 339 aaKnown RBP13.46□□□□□ -0.25
CDCA3-212ENST00000604599 GRM4Q14833 912 aa13.46□□□□□ -0.25
CDCA3-212ENST00000604599 BARGINQ6ZT62 677 aa13.46□□□□□ -0.25
CDCA3-212ENST00000604599 USP17L1Q7RTZ2 530 aa13.46□□□□□ -0.25
CDCA3-212ENST00000604599 SPATA21Q7Z572 469 aa13.46□□□□□ -0.25
CDCA3-212ENST00000604599 SYCE1Q8N0S2 351 aa13.46□□□□□ -0.25
CDCA3-212ENST00000604599 TBC1D16Q8TBP0 767 aa13.46□□□□□ -0.25
CDCA3-212ENST00000604599 C18orf8Q96DM3 657 aa13.46□□□□□ -0.25
CDCA3-212ENST00000604599 PLCD4Q9BRC7 762 aa13.46□□□□□ -0.25
CDCA3-212ENST00000604599 ZBTB1Q9Y2K1 713 aa13.46□□□□□ -0.25
CDCA3-212ENST00000604599 KIAA0391O15091 583 aaKnown RBP13.46□□□□□ -0.25
CDCA3-212ENST00000604599 SLC37A4O43826 429 aa13.46□□□□□ -0.25
CDCA3-212ENST00000604599 PLS1Q14651 629 aa13.46□□□□□ -0.25
CDCA3-212ENST00000604599 AADACL2Q6P093 401 aa13.46□□□□□ -0.25
CDCA3-212ENST00000604599 TAOK1Q7L7X3 1001 aa13.46□□□□□ -0.25
CDCA3-212ENST00000604599 EXOC3L1Q86VI1 746 aa13.46□□□□□ -0.25
CDCA3-212ENST00000604599 CCDC25Q86WR0 208 aa13.46□□□□□ -0.25
CDCA3-212ENST00000604599 AJAP1Q9UKB5 411 aaPredicted RBP13.46□□□□□ -0.25
CDCA3-212ENST00000604599 STX8Q9UNK0 236 aa13.46□□□□□ -0.25
CDCA3-212ENST00000604599 ARL2BPQ9Y2Y0 163 aa13.46□□□□□ -0.25
CDCA3-212ENST00000604599 TMEM120BA0PK00 339 aa13.46□□□□□ -0.26
CDCA3-212ENST00000604599 ABCB4P21439 1286 aa13.46□□□□□ -0.26
CDCA3-212ENST00000604599 ADAM9Q13443 819 aa13.46□□□□□ -0.26
CDCA3-212ENST00000604599 LONRF1Q17RB8 773 aa13.46□□□□□ -0.26
CDCA3-212ENST00000604599 CEP63Q96MT8 703 aa13.46□□□□□ -0.26
CDCA3-212ENST00000604599 UIMC1Q96RL1 719 aa13.46□□□□□ -0.26
CDCA3-212ENST00000604599 RXFP1Q9HBX9 757 aa13.46□□□□□ -0.26
CDCA3-212ENST00000604599 ADAMTSL3P82987 1691 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 TDP2O95551 362 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 USP17L8P0C7I0 530 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 RAD23BP54727 409 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 PSMD2Q13200 908 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 ECM1Q16610 540 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 GJB7Q6PEY0 223 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 CNBD1Q8NA66 436 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 GJA10Q969M2 543 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 UTP4Q969X6 686 aaKnown RBP13.45□□□□□ -0.26
CDCA3-212ENST00000604599 DNAJC19Q96DA6 116 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 DYNLL2Q96FJ2 89 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 VAT1LQ9HCJ6 419 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 KCNK9Q9NPC2 374 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 IRAK4Q9NWZ3 460 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 GRHL1Q9NZI5 618 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 NUP98P52948 1817 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 LRRD1A4D1F6 860 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 DDX3XO00571 662 aaKnown RBP eCLIP13.45□□□□□ -0.26
CDCA3-212ENST00000604599 GH1P01241 217 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 FERP16591 822 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 RPL21P46778 160 aaKnown RBP13.45□□□□□ -0.26
CDCA3-212ENST00000604599 GNAQP50148 359 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 CCNG1P51959 295 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 GALCP54803 685 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 MAPK7Q13164 816 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 TMEM266Q2M3C6 531 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 KRT79Q5XKE5 535 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 CWF19L1Q69YN2 538 aaKnown RBP13.45□□□□□ -0.26
CDCA3-212ENST00000604599 FBF1Q8TES7 1133 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 ZHX3Q9H4I2 956 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 MCM9Q9NXL9 1143 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 TMOD4Q9NZQ9 345 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 HDAC9Q9UKV0 1011 aa13.45□□□□□ -0.26
CDCA3-212ENST00000604599 IGSF9BQ9UPX0 1349 aa13.44□□□□□ -0.26
CDCA3-212ENST00000604599 NPHP3-ACAD11A0A0J9YXS1 232 aa13.44□□□□□ -0.26
CDCA3-212ENST00000604599 RIPK2O43353 540 aa13.44□□□□□ -0.26
CDCA3-212ENST00000604599 GNA14O95837 355 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms