RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 OSMRQ99650 979 aa13.46□□□□□ -0.25
PDLIM1P1-201ENST00000604187 SPZ1Q9BXG8 430 aa13.46□□□□□ -0.25
PDLIM1P1-201ENST00000604187 IL25Q9H293 177 aa13.46□□□□□ -0.25
PDLIM1P1-201ENST00000604187 ELAC1Q9H777 363 aaKnown RBP13.46□□□□□ -0.25
PDLIM1P1-201ENST00000604187 PSTPIP2Q9H939 334 aa13.46□□□□□ -0.25
PDLIM1P1-201ENST00000604187 SPG21Q9NZD8 308 aa13.46□□□□□ -0.25
PDLIM1P1-201ENST00000604187 DBR1Q9UK59 544 aaKnown RBP13.46□□□□□ -0.25
PDLIM1P1-201ENST00000604187 MYH7BA7E2Y1 1941 aa13.46□□□□□ -0.25
PDLIM1P1-201ENST00000604187 ACACBO00763 2458 aa13.46□□□□□ -0.26
PDLIM1P1-201ENST00000604187 SPDYE3A6NKU9 549 aa13.45□□□□□ -0.26
PDLIM1P1-201ENST00000604187 HOXA2O43364 376 aa13.45□□□□□ -0.26
PDLIM1P1-201ENST00000604187 NPR3P17342 541 aa13.45□□□□□ -0.26
PDLIM1P1-201ENST00000604187 FAM189BP81408 668 aa13.45□□□□□ -0.26
PDLIM1P1-201ENST00000604187 ATAT1Q5SQI0 421 aa13.45□□□□□ -0.26
PDLIM1P1-201ENST00000604187 KIAA1841Q6NSI8 718 aa13.45□□□□□ -0.26
PDLIM1P1-201ENST00000604187 KANK3Q6NY19 840 aa13.45□□□□□ -0.26
PDLIM1P1-201ENST00000604187 FAM228AQ86W67 206 aa13.45□□□□□ -0.26
PDLIM1P1-201ENST00000604187 ABI1Q8IZP0 508 aa13.45□□□□□ -0.26
PDLIM1P1-201ENST00000604187 PLCD3Q8N3E9 789 aa13.45□□□□□ -0.26
PDLIM1P1-201ENST00000604187 DTWD2Q8NBA8 298 aa13.45□□□□□ -0.26
PDLIM1P1-201ENST00000604187 RNF169Q8NCN4 708 aa13.45□□□□□ -0.26
PDLIM1P1-201ENST00000604187 SDF4Q9BRK5 362 aa13.45□□□□□ -0.26
PDLIM1P1-201ENST00000604187 MYL10Q9BUA6 226 aa13.45□□□□□ -0.26
PDLIM1P1-201ENST00000604187 KCNH7Q9NS40 1196 aa13.45□□□□□ -0.26
PDLIM1P1-201ENST00000604187 RNF19AQ9NV58 838 aa13.45□□□□□ -0.26
PDLIM1P1-201ENST00000604187 DZANK1Q9NVP4 752 aa13.45□□□□□ -0.26
PDLIM1P1-201ENST00000604187 USTQ9Y2C2 406 aa13.45□□□□□ -0.26
PDLIM1P1-201ENST00000604187 TPRP12270 2363 aaKnown RBP13.45□□□□□ -0.26
PDLIM1P1-201ENST00000604187 LAMA4Q16363 1823 aa13.44□□□□□ -0.26
PDLIM1P1-201ENST00000604187 KIAA1671Q9BY89 1806 aa13.44□□□□□ -0.26
PDLIM1P1-201ENST00000604187 MAFGO15525 162 aa13.44□□□□□ -0.26
PDLIM1P1-201ENST00000604187 EOMESO95936 686 aa13.44□□□□□ -0.26
PDLIM1P1-201ENST00000604187 SLC26A2P50443 739 aa13.44□□□□□ -0.26
PDLIM1P1-201ENST00000604187 ITGB3BPQ13352 177 aaPredicted RBP13.44□□□□□ -0.26
PDLIM1P1-201ENST00000604187 DSC3Q14574 896 aa13.44□□□□□ -0.26
PDLIM1P1-201ENST00000604187 RALYLQ86SE5 291 aaKnown RBP13.44□□□□□ -0.26
PDLIM1P1-201ENST00000604187 KIAA2013Q8IYS2 634 aa13.44□□□□□ -0.26
PDLIM1P1-201ENST00000604187 SIX5Q8N196 739 aa13.44□□□□□ -0.26
PDLIM1P1-201ENST00000604187 SLC39A11Q8N1S5 342 aa13.44□□□□□ -0.26
PDLIM1P1-201ENST00000604187 CTCFLQ8NI51 663 aaPredicted RBP13.44□□□□□ -0.26
PDLIM1P1-201ENST00000604187 CYP26B1Q9NR63 512 aa13.44□□□□□ -0.26
PDLIM1P1-201ENST00000604187 FBXL21Q9UKT6 434 aa13.44□□□□□ -0.26
PDLIM1P1-201ENST00000604187 GPR179Q6PRD1 2367 aa13.43□□□□□ -0.26
PDLIM1P1-201ENST00000604187 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.43□□□□□ -0.26
PDLIM1P1-201ENST00000604187 BACH1O14867 736 aa13.43□□□□□ -0.26
PDLIM1P1-201ENST00000604187 PLEKHA8P1O95397 391 aa13.43□□□□□ -0.26
PDLIM1P1-201ENST00000604187 LMNAP02545 664 aaKnown RBP13.43□□□□□ -0.26
PDLIM1P1-201ENST00000604187 EPCAMP16422 314 aa13.43□□□□□ -0.26
PDLIM1P1-201ENST00000604187 KIF5BP33176 963 aa13.43□□□□□ -0.26
PDLIM1P1-201ENST00000604187 CRYBB1P53674 252 aaPredicted RBP13.43□□□□□ -0.26
PDLIM1P1-201ENST00000604187 B4GALNT3Q6L9W6 998 aa13.43□□□□□ -0.26
PDLIM1P1-201ENST00000604187 TMC5Q6UXY8 1006 aa13.43□□□□□ -0.26
PDLIM1P1-201ENST00000604187 PLEKHM2Q8IWE5 1019 aa13.43□□□□□ -0.26
PDLIM1P1-201ENST00000604187 CYP2W1Q8TAV3 490 aa13.43□□□□□ -0.26
PDLIM1P1-201ENST00000604187 FEZF2Q8TBJ5 459 aa13.43□□□□□ -0.26
PDLIM1P1-201ENST00000604187 PCDHA6Q9UN73 950 aa13.43□□□□□ -0.26
PDLIM1P1-201ENST00000604187 PCDHA8Q9Y5H6 950 aa13.43□□□□□ -0.26
PDLIM1P1-201ENST00000604187 TAF6LQ9Y6J9 622 aa13.43□□□□□ -0.26
PDLIM1P1-201ENST00000604187 NFASCO94856 1347 aa13.42□□□□□ -0.26
PDLIM1P1-201ENST00000604187 PLXNA4Q9HCM2 1894 aa13.42□□□□□ -0.26
PDLIM1P1-201ENST00000604187 hCG_1642624A0A1W2PR95 340 aa13.42□□□□□ -0.26
PDLIM1P1-201ENST00000604187 HBP1O60381 514 aa13.42□□□□□ -0.26
PDLIM1P1-201ENST00000604187 DDAH1O94760 285 aa13.42□□□□□ -0.26
PDLIM1P1-201ENST00000604187 CCNE2O96020 404 aa13.42□□□□□ -0.26
PDLIM1P1-201ENST00000604187 VTNP04004 478 aa13.42□□□□□ -0.26
PDLIM1P1-201ENST00000604187 CYP21A2P08686 494 aa13.42□□□□□ -0.26
PDLIM1P1-201ENST00000604187 METAP2P50579 478 aaKnown RBP eCLIP13.42□□□□□ -0.26
PDLIM1P1-201ENST00000604187 ANTXR2P58335 489 aa13.42□□□□□ -0.26
PDLIM1P1-201ENST00000604187 TDGQ13569 410 aa13.42□□□□□ -0.26
PDLIM1P1-201ENST00000604187 CLLU1OSQ5K130 101 aa13.42□□□□□ -0.26
PDLIM1P1-201ENST00000604187 ZNF654Q8IZM8 581 aa13.42□□□□□ -0.26
PDLIM1P1-201ENST00000604187 CMTR1Q8N1G2 835 aaKnown RBP13.42□□□□□ -0.26
PDLIM1P1-201ENST00000604187 TMEM87AQ8NBN3 555 aa13.42□□□□□ -0.26
PDLIM1P1-201ENST00000604187 AUTS2Q8WXX7 1259 aa13.42□□□□□ -0.26
PDLIM1P1-201ENST00000604187 ACSF2Q96CM8 615 aaPredicted RBP13.42□□□□□ -0.26
PDLIM1P1-201ENST00000604187 RTP3Q9BQQ7 232 aa13.42□□□□□ -0.26
PDLIM1P1-201ENST00000604187 MXRA8Q9BRK3 442 aa13.42□□□□□ -0.26
PDLIM1P1-201ENST00000604187 OSBPL3Q9H4L5 887 aa13.42□□□□□ -0.26
PDLIM1P1-201ENST00000604187 R4GN57 208 aa13.42□□□□□ -0.26
PDLIM1P1-201ENST00000604187 KMT2BQ9UMN6 2715 aaPredicted RBP13.42□□□□□ -0.26
PDLIM1P1-201ENST00000604187 ZBTB42B2RXF5 422 aa13.41□□□□□ -0.26
PDLIM1P1-201ENST00000604187 C22orf31O95567 290 aa13.41□□□□□ -0.26
PDLIM1P1-201ENST00000604187 CXCL14O95715 111 aa13.41□□□□□ -0.26
PDLIM1P1-201ENST00000604187 BMS1Q14692 1282 aaKnown RBP13.41□□□□□ -0.26
PDLIM1P1-201ENST00000604187 ZNF484Q5JVG2 852 aa13.41□□□□□ -0.26
PDLIM1P1-201ENST00000604187 FAM160B1Q5W0V3 765 aa13.41□□□□□ -0.26
PDLIM1P1-201ENST00000604187 CCDC149Q6ZUS6 474 aa13.41□□□□□ -0.26
PDLIM1P1-201ENST00000604187 OTOP3Q7RTS5 596 aa13.41□□□□□ -0.26
PDLIM1P1-201ENST00000604187 CABP7Q86V35 215 aa13.41□□□□□ -0.26
PDLIM1P1-201ENST00000604187 ECHDC2Q86YB7 292 aa13.41□□□□□ -0.26
PDLIM1P1-201ENST00000604187 CCDC60Q8IWA6 550 aaPredicted RBP13.41□□□□□ -0.26
PDLIM1P1-201ENST00000604187 SRBD1Q8N5C6 995 aaKnown RBP13.41□□□□□ -0.26
PDLIM1P1-201ENST00000604187 METTL13Q8N6R0 699 aa13.41□□□□□ -0.26
PDLIM1P1-201ENST00000604187 NCOA7Q8NI08 942 aa13.41□□□□□ -0.26
PDLIM1P1-201ENST00000604187 HELQQ8TDG4 1101 aa13.41□□□□□ -0.26
PDLIM1P1-201ENST00000604187 HINFPQ9BQA5 517 aa13.41□□□□□ -0.26
PDLIM1P1-201ENST00000604187 LZTS2Q9BRK4 669 aa13.41□□□□□ -0.26
PDLIM1P1-201ENST00000604187 SEMA4AQ9H3S1 761 aa13.41□□□□□ -0.26
PDLIM1P1-201ENST00000604187 AGO4Q9HCK5 861 aaKnown RBP13.41□□□□□ -0.26
PDLIM1P1-201ENST00000604187 DUSP12Q9UNI6 340 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms