RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 PADI3Q9ULW8 664 aa10.89□□□□□ -0.67
VRK3-215ENST00000599138 PCDHA12Q9UN75 941 aa10.89□□□□□ -0.67
VRK3-215ENST00000599138 INSL6Q9Y581 213 aa10.89□□□□□ -0.67
VRK3-215ENST00000599138 GTF3C3Q9Y5Q9 886 aa10.89□□□□□ -0.67
VRK3-215ENST00000599138 COL4A6Q14031 1691 aa10.89□□□□□ -0.67
VRK3-215ENST00000599138 LINC01553A4QN01 128 aa10.88□□□□□ -0.67
VRK3-215ENST00000599138 EPOPA6NHQ4 379 aa10.88□□□□□ -0.67
VRK3-215ENST00000599138 DDX11L8A8MPP1 907 aa10.88□□□□□ -0.67
VRK3-215ENST00000599138 MARCH6O60337 910 aa10.88□□□□□ -0.67
VRK3-215ENST00000599138 DKC1O60832 514 aaKnown RBP eCLIP10.88□□□□□ -0.67
VRK3-215ENST00000599138 MAFO75444 373 aaPredicted RBP10.88□□□□□ -0.67
VRK3-215ENST00000599138 SLITRK3O94933 977 aa10.88□□□□□ -0.67
VRK3-215ENST00000599138 LYPLA2O95372 231 aa10.88□□□□□ -0.67
VRK3-215ENST00000599138 VTNP04004 478 aa10.88□□□□□ -0.67
VRK3-215ENST00000599138 POU3F3P20264 500 aaPredicted RBP10.88□□□□□ -0.67
VRK3-215ENST00000599138 TMOD1P28289 359 aa10.88□□□□□ -0.67
VRK3-215ENST00000599138 TBC1D8BQ0IIM8 1120 aa10.88□□□□□ -0.67
VRK3-215ENST00000599138 PAK2Q13177 524 aa10.88□□□□□ -0.67
VRK3-215ENST00000599138 KIZQ2M2Z5 673 aa10.88□□□□□ -0.67
VRK3-215ENST00000599138 MTERF2Q49AM1 385 aa10.88□□□□□ -0.67
VRK3-215ENST00000599138 NCAPH2Q6IBW4 605 aa10.88□□□□□ -0.67
VRK3-215ENST00000599138 FAM117BQ6P1L5 589 aa10.88□□□□□ -0.67
VRK3-215ENST00000599138 SPRED2Q7Z698 418 aa10.88□□□□□ -0.67
VRK3-215ENST00000599138 LRRC71Q8N4P6 559 aa10.88□□□□□ -0.67
VRK3-215ENST00000599138 MAP7D2Q96T17 732 aa10.88□□□□□ -0.67
VRK3-215ENST00000599138 LXNQ9BS40 222 aa10.88□□□□□ -0.67
VRK3-215ENST00000599138 TSPYL2Q9H2G4 693 aaPredicted RBP10.88□□□□□ -0.67
VRK3-215ENST00000599138 ZSWIM4Q9H7M6 989 aa10.88□□□□□ -0.67
VRK3-215ENST00000599138 TTC12Q9H892 705 aaPredicted RBP10.88□□□□□ -0.67
VRK3-215ENST00000599138 RC3H2Q9HBD1 1191 aaKnown RBP10.88□□□□□ -0.67
VRK3-215ENST00000599138 CYP26B1Q9NR63 512 aa10.88□□□□□ -0.67
VRK3-215ENST00000599138 RGL1Q9NZL6 768 aa10.88□□□□□ -0.67
VRK3-215ENST00000599138 SEPT9Q9UHD8 586 aaPredicted RBP10.88□□□□□ -0.67
VRK3-215ENST00000599138 NOC2LQ9Y3T9 749 aaKnown RBP10.88□□□□□ -0.67
VRK3-215ENST00000599138 KIF3AQ9Y496 699 aa10.88□□□□□ -0.67
VRK3-215ENST00000599138 PPME1Q9Y570 386 aa10.88□□□□□ -0.67
VRK3-215ENST00000599138 RPS6KA5O75582 802 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 ATP2B1P20020 1258 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 GJB2P29033 226 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 MCM7P33993 719 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 TXKP42681 527 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 TOB1P50616 345 aaPredicted RBP10.87□□□□□ -0.67
VRK3-215ENST00000599138 GPC3P51654 580 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 NPEPPSP55786 919 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 NLRP11P59045 1033 aaKnown RBP10.87□□□□□ -0.67
VRK3-215ENST00000599138 ERVK-21P61565 698 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 DRP2Q13474 957 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 CUL4AQ13619 759 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 CTTNQ14247 550 aaKnown RBP10.87□□□□□ -0.67
VRK3-215ENST00000599138 ZNF174Q15697 407 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 TMEM266Q2M3C6 531 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 TTC38Q5R3I4 469 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 PLA2G4FQ68DD2 849 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 FAM228AQ86W67 206 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 C4orf32Q8N8J7 132 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 ZNF579Q8NAF0 562 aaKnown RBP10.87□□□□□ -0.67
VRK3-215ENST00000599138 MAFAQ8NHW3 353 aaPredicted RBP10.87□□□□□ -0.67
VRK3-215ENST00000599138 NEK9Q8TD19 979 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 DYDC2Q96IM9 177 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 GAS2L1Q99501 681 aaPredicted RBP10.87□□□□□ -0.67
VRK3-215ENST00000599138 OSMRQ99650 979 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 EIF2AK1Q9BQI3 630 aaKnown RBP10.87□□□□□ -0.67
VRK3-215ENST00000599138 SH2D3AQ9BRG2 576 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 DHX33Q9H6R0 707 aaKnown RBP10.87□□□□□ -0.67
VRK3-215ENST00000599138 SUGCTQ9HAC7 445 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 ST3GAL5Q9UNP4 418 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 AKT3Q9Y243 479 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 GINS2Q9Y248 185 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 UNC80Q8N2C7 3258 aa10.87□□□□□ -0.67
VRK3-215ENST00000599138 SPTBN5Q9NRC6 3674 aaKnown RBP10.87□□□□□ -0.67
VRK3-215ENST00000599138 GPR182O15218 404 aa10.86□□□□□ -0.67
VRK3-215ENST00000599138 MGEA5O60502 916 aa10.86□□□□□ -0.67
VRK3-215ENST00000599138 LPXNO60711 386 aa10.86□□□□□ -0.67
VRK3-215ENST00000599138 OR52Z1P0C646 297 aa10.86□□□□□ -0.67
VRK3-215ENST00000599138 SPATA31C1P0DKV0 1188 aa10.86□□□□□ -0.67
VRK3-215ENST00000599138 EIF4BP23588 611 aaKnown RBP10.86□□□□□ -0.67
VRK3-215ENST00000599138 YWHABP31946 246 aaKnown RBP10.86□□□□□ -0.67
VRK3-215ENST00000599138 CDC42EP1Q00587 391 aa10.86□□□□□ -0.67
VRK3-215ENST00000599138 CYP4A11Q02928 519 aa10.86□□□□□ -0.67
VRK3-215ENST00000599138 DSC3Q14574 896 aa10.86□□□□□ -0.67
VRK3-215ENST00000599138 ODR4Q5SWX8 454 aa10.86□□□□□ -0.67
VRK3-215ENST00000599138 ARNTL2Q8WYA1 636 aa10.86□□□□□ -0.67
VRK3-215ENST00000599138 ZNF689Q96CS4 500 aaPredicted RBP10.86□□□□□ -0.67
VRK3-215ENST00000599138 TGS1Q96RS0 853 aaKnown RBP10.86□□□□□ -0.67
VRK3-215ENST00000599138 PPP1R16BQ96T49 567 aa10.86□□□□□ -0.67
VRK3-215ENST00000599138 JPH2Q9BR39 696 aaPredicted RBP10.86□□□□□ -0.67
VRK3-215ENST00000599138 CERS4Q9HA82 394 aa10.86□□□□□ -0.67
VRK3-215ENST00000599138 ARID2Q68CP9 1835 aa10.86□□□□□ -0.67
VRK3-215ENST00000599138 POTEMA6NI47 508 aa10.85□□□□□ -0.67
VRK3-215ENST00000599138 RFXAPO00287 272 aa10.85□□□□□ -0.67
VRK3-215ENST00000599138 ZBTB39O15060 712 aa10.85□□□□□ -0.67
VRK3-215ENST00000599138 DGKIO75912 1065 aa10.85□□□□□ -0.67
VRK3-215ENST00000599138 UPP2O95045 317 aa10.85□□□□□ -0.67
VRK3-215ENST00000599138 LINC00271P0C7V0 271 aa10.85□□□□□ -0.67
VRK3-215ENST00000599138 XRCC6P12956 609 aaKnown RBP eCLIP10.85□□□□□ -0.67
VRK3-215ENST00000599138 DARSP14868 501 aaKnown RBP10.85□□□□□ -0.67
VRK3-215ENST00000599138 RFC5P40937 340 aa10.85□□□□□ -0.67
VRK3-215ENST00000599138 DNM2P50570 870 aa10.85□□□□□ -0.67
VRK3-215ENST00000599138 FAM189BP81408 668 aa10.85□□□□□ -0.67
VRK3-215ENST00000599138 NFX1Q12986 1120 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms