RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 TMEM40Q8WWA1 233 aa16.42■□□□□ 0.22
XRCC1-208ENST00000598422 TNFRSF25Q93038 417 aa16.42■□□□□ 0.22
XRCC1-208ENST00000598422 ERVK-5Q9HDB9 667 aa16.42■□□□□ 0.22
XRCC1-208ENST00000598422 PRDM6Q9NQX0 595 aa16.42■□□□□ 0.22
XRCC1-208ENST00000598422 RNF216Q9NWF9 866 aaPredicted RBP16.42■□□□□ 0.22
XRCC1-208ENST00000598422 NOC2LQ9Y3T9 749 aaKnown RBP16.42■□□□□ 0.22
XRCC1-208ENST00000598422 EML1O00423 815 aa16.41■□□□□ 0.22
XRCC1-208ENST00000598422 ST18O60284 1047 aa16.41■□□□□ 0.22
XRCC1-208ENST00000598422 NEMFO60524 1076 aa16.41■□□□□ 0.22
XRCC1-208ENST00000598422 LPXNO60711 386 aa16.41■□□□□ 0.22
XRCC1-208ENST00000598422 GPR32O75388 356 aa16.41■□□□□ 0.22
XRCC1-208ENST00000598422 P4HBP07237 508 aaKnown RBP16.41■□□□□ 0.22
XRCC1-208ENST00000598422 CTNNB1P35222 781 aa16.41■□□□□ 0.22
XRCC1-208ENST00000598422 QARSP47897 775 aaKnown RBP16.41■□□□□ 0.22
XRCC1-208ENST00000598422 DNM2P50570 870 aa16.41■□□□□ 0.22
XRCC1-208ENST00000598422 BTG3Q14201 252 aaPredicted RBP16.41■□□□□ 0.22
XRCC1-208ENST00000598422 CALCRLQ16602 461 aa16.41■□□□□ 0.22
XRCC1-208ENST00000598422 EPC2Q52LR7 807 aa16.41■□□□□ 0.22
XRCC1-208ENST00000598422 NLRP7Q8WX94 980 aa16.41■□□□□ 0.22
XRCC1-208ENST00000598422 HAS1Q92839 578 aa16.41■□□□□ 0.22
XRCC1-208ENST00000598422 KIF2CQ99661 725 aa16.41■□□□□ 0.22
XRCC1-208ENST00000598422 JPH2Q9BR39 696 aaPredicted RBP16.41■□□□□ 0.22
XRCC1-208ENST00000598422 NIFKQ9BYG3 293 aaKnown RBP16.41■□□□□ 0.22
XRCC1-208ENST00000598422 CDHR5Q9HBB8 845 aa16.41■□□□□ 0.22
XRCC1-208ENST00000598422 C1orf112Q9NSG2 853 aa16.41■□□□□ 0.22
XRCC1-208ENST00000598422 ST3GAL5Q9UNP4 418 aa16.41■□□□□ 0.22
XRCC1-208ENST00000598422 RWDD3Q9Y3V2 267 aa16.41■□□□□ 0.22
XRCC1-208ENST00000598422 GBF1Q92538 1859 aa16.4■□□□□ 0.22
XRCC1-208ENST00000598422 TMEM150BA6NC51 233 aa16.4■□□□□ 0.22
XRCC1-208ENST00000598422 TARBP2Q15633 366 aaKnown RBP16.4■□□□□ 0.22
XRCC1-208ENST00000598422 PTPROQ16827 1216 aa16.4■□□□□ 0.22
XRCC1-208ENST00000598422 TJAP1Q5JTD0 557 aa16.4■□□□□ 0.22
XRCC1-208ENST00000598422 PLA2G4FQ68DD2 849 aa16.4■□□□□ 0.22
XRCC1-208ENST00000598422 FAM228AQ86W67 206 aa16.4■□□□□ 0.22
XRCC1-208ENST00000598422 TMEM192Q8IY95 271 aa16.4■□□□□ 0.22
XRCC1-208ENST00000598422 LINC01465Q8N7H1 131 aa16.4■□□□□ 0.22
XRCC1-208ENST00000598422 ATXN2LQ8WWM7 1075 aaKnown RBP16.4■□□□□ 0.22
XRCC1-208ENST00000598422 ADAM2Q99965 735 aa16.4■□□□□ 0.22
XRCC1-208ENST00000598422 LXNQ9BS40 222 aa16.4■□□□□ 0.22
XRCC1-208ENST00000598422 TMX1Q9H3N1 280 aa16.4■□□□□ 0.22
XRCC1-208ENST00000598422 LMCD1Q9NZU5 365 aa16.4■□□□□ 0.22
XRCC1-208ENST00000598422 PCDHB7Q9Y5E2 793 aa16.4■□□□□ 0.22
XRCC1-208ENST00000598422 CHD9Q3L8U1 2897 aa16.4■□□□□ 0.22
XRCC1-208ENST00000598422 DGKIO75912 1065 aa16.39■□□□□ 0.21
XRCC1-208ENST00000598422 ATP2B1P20020 1258 aa16.39■□□□□ 0.21
XRCC1-208ENST00000598422 SARSP49591 514 aaKnown RBP16.39■□□□□ 0.21
XRCC1-208ENST00000598422 GPM6BQ13491 265 aa16.39■□□□□ 0.21
XRCC1-208ENST00000598422 EPHA7Q15375 998 aa16.39■□□□□ 0.21
XRCC1-208ENST00000598422 ANO5Q75V66 913 aa16.39■□□□□ 0.21
XRCC1-208ENST00000598422 SLC7A3Q8WY07 619 aa16.39■□□□□ 0.21
XRCC1-208ENST00000598422 SYMPKQ92797 1274 aaKnown RBP16.39■□□□□ 0.21
XRCC1-208ENST00000598422 ZNF668Q96K58 619 aaPredicted RBP16.39■□□□□ 0.21
XRCC1-208ENST00000598422 CEP170P1Q96L14 293 aa16.39■□□□□ 0.21
XRCC1-208ENST00000598422 SH2D3AQ9BRG2 576 aa16.39■□□□□ 0.21
XRCC1-208ENST00000598422 C11orf84Q9BUA3 381 aaPredicted RBP16.39■□□□□ 0.21
XRCC1-208ENST00000598422 KIF3AQ9Y496 699 aa16.39■□□□□ 0.21
XRCC1-208ENST00000598422 COL4A6Q14031 1691 aa16.39■□□□□ 0.21
XRCC1-208ENST00000598422 ZSCAN20P17040 1043 aaPredicted RBP16.38■□□□□ 0.21
XRCC1-208ENST00000598422 EIF4BP23588 611 aaKnown RBP16.38■□□□□ 0.21
XRCC1-208ENST00000598422 GPC3P51654 580 aa16.38■□□□□ 0.21
XRCC1-208ENST00000598422 MRPS5P82675 430 aaKnown RBP16.38■□□□□ 0.21
XRCC1-208ENST00000598422 CDC42EP1Q00587 391 aa16.38■□□□□ 0.21
XRCC1-208ENST00000598422 AAK1Q2M2I8 961 aa16.38■□□□□ 0.21
XRCC1-208ENST00000598422 PAN2Q504Q3 1202 aaKnown RBP16.38■□□□□ 0.21
XRCC1-208ENST00000598422 SLC24A5Q71RS6 500 aa16.38■□□□□ 0.21
XRCC1-208ENST00000598422 OTUD6AQ7L8S5 288 aa16.38■□□□□ 0.21
XRCC1-208ENST00000598422 RTN4RL1Q86UN2 441 aaPredicted RBP16.38■□□□□ 0.21
XRCC1-208ENST00000598422 EXOC8Q8IYI6 725 aa16.38■□□□□ 0.21
XRCC1-208ENST00000598422 CMTR2Q8IYT2 770 aaKnown RBP16.38■□□□□ 0.21
XRCC1-208ENST00000598422 COL25A1Q9BXS0 654 aaPredicted RBP16.38■□□□□ 0.21
XRCC1-208ENST00000598422 GCOM2Q9BZD3 368 aaPredicted RBP16.38■□□□□ 0.21
XRCC1-208ENST00000598422 ADAMTS10Q9H324 1103 aa16.38■□□□□ 0.21
XRCC1-208ENST00000598422 ZSWIM4Q9H7M6 989 aa16.38■□□□□ 0.21
XRCC1-208ENST00000598422 RC3H2Q9HBD1 1191 aaKnown RBP16.38■□□□□ 0.21
XRCC1-208ENST00000598422 CYP26B1Q9NR63 512 aa16.38■□□□□ 0.21
XRCC1-208ENST00000598422 SUCLA2Q9P2R7 463 aaPredicted RBP16.38■□□□□ 0.21
XRCC1-208ENST00000598422 PCDHA12Q9UN75 941 aa16.38■□□□□ 0.21
XRCC1-208ENST00000598422 PPME1Q9Y570 386 aa16.38■□□□□ 0.21
XRCC1-208ENST00000598422 MICAL3Q7RTP6 2002 aa16.38■□□□□ 0.21
XRCC1-208ENST00000598422 KAT6AQ92794 2004 aa16.37■□□□□ 0.21
XRCC1-208ENST00000598422 H3BNC9 293 aa16.37■□□□□ 0.21
XRCC1-208ENST00000598422 MGEA5O60502 916 aa16.37■□□□□ 0.21
XRCC1-208ENST00000598422 STBD1O95210 358 aa16.37■□□□□ 0.21
XRCC1-208ENST00000598422 DARSP14868 501 aaKnown RBP16.37■□□□□ 0.21
XRCC1-208ENST00000598422 YWHABP31946 246 aaKnown RBP16.37■□□□□ 0.21
XRCC1-208ENST00000598422 MCM7P33993 719 aa16.37■□□□□ 0.21
XRCC1-208ENST00000598422 POLGP54098 1239 aaPredicted RBP16.37■□□□□ 0.21
XRCC1-208ENST00000598422 CYP4A11Q02928 519 aa16.37■□□□□ 0.21
XRCC1-208ENST00000598422 DRP2Q13474 957 aa16.37■□□□□ 0.21
XRCC1-208ENST00000598422 TIGD5Q53EQ6 642 aa16.37■□□□□ 0.21
XRCC1-208ENST00000598422 C4orf19Q8IY42 314 aa16.37■□□□□ 0.21
XRCC1-208ENST00000598422 ZNF689Q96CS4 500 aaPredicted RBP16.37■□□□□ 0.21
XRCC1-208ENST00000598422 MRPL38Q96DV4 380 aaKnown RBP16.37■□□□□ 0.21
XRCC1-208ENST00000598422 DYDC2Q96IM9 177 aa16.37■□□□□ 0.21
XRCC1-208ENST00000598422 CCDC43Q96MW1 224 aaKnown RBP16.37■□□□□ 0.21
XRCC1-208ENST00000598422 ASB2Q96Q27 587 aa16.37■□□□□ 0.21
XRCC1-208ENST00000598422 FOXP1Q9H334 677 aaPredicted RBP16.37■□□□□ 0.21
XRCC1-208ENST00000598422 TTC12Q9H892 705 aaPredicted RBP16.37■□□□□ 0.21
XRCC1-208ENST00000598422 ATP6V0A4Q9HBG4 840 aa16.37■□□□□ 0.21
XRCC1-208ENST00000598422 RGS18Q9NS28 235 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms