RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 CTTNQ14247 550 aaKnown RBP23.63■■□□□ 1.37
PNKP-209ENST00000596726 MYOCDQ8IZQ8 938 aa23.63■■□□□ 1.37
PNKP-209ENST00000596726 ZNF710Q8N1W2 664 aa23.63■■□□□ 1.37
PNKP-209ENST00000596726 NEK9Q8TD19 979 aa23.63■■□□□ 1.37
PNKP-209ENST00000596726 TMEM40Q8WWA1 233 aa23.63■■□□□ 1.37
PNKP-209ENST00000596726 RAD9AQ99638 391 aa23.63■■□□□ 1.37
PNKP-209ENST00000596726 SH2D3AQ9BRG2 576 aa23.63■■□□□ 1.37
PNKP-209ENST00000596726 ZSWIM4Q9H7M6 989 aa23.63■■□□□ 1.37
PNKP-209ENST00000596726 ENPP3O14638 875 aa23.62■■□□□ 1.37
PNKP-209ENST00000596726 MAFO75444 373 aaPredicted RBP23.62■■□□□ 1.37
PNKP-209ENST00000596726 OR52Z1P0C646 297 aa23.62■■□□□ 1.37
PNKP-209ENST00000596726 CYP4A11Q02928 519 aa23.62■■□□□ 1.37
PNKP-209ENST00000596726 KIZQ2M2Z5 673 aa23.62■■□□□ 1.37
PNKP-209ENST00000596726 PPP2R2DQ66LE6 453 aa23.62■■□□□ 1.37
PNKP-209ENST00000596726 PLA2G4FQ68DD2 849 aa23.62■■□□□ 1.37
PNKP-209ENST00000596726 FAM43BQ6ZT52 329 aaPredicted RBP23.62■■□□□ 1.37
PNKP-209ENST00000596726 MAP7D2Q96T17 732 aa23.62■■□□□ 1.37
PNKP-209ENST00000596726 ZBED2Q9BTP6 218 aa23.62■■□□□ 1.37
PNKP-209ENST00000596726 ADAMTS10Q9H324 1103 aa23.62■■□□□ 1.37
PNKP-209ENST00000596726 SUGCTQ9HAC7 445 aa23.62■■□□□ 1.37
PNKP-209ENST00000596726 ERVK-5Q9HDB9 667 aa23.62■■□□□ 1.37
PNKP-209ENST00000596726 CYP26B1Q9NR63 512 aa23.62■■□□□ 1.37
PNKP-209ENST00000596726 NOC2LQ9Y3T9 749 aaKnown RBP23.62■■□□□ 1.37
PNKP-209ENST00000596726 PPME1Q9Y570 386 aa23.62■■□□□ 1.37
PNKP-209ENST00000596726 POTEMA6NI47 508 aa23.61■■□□□ 1.37
PNKP-209ENST00000596726 H3BQV1 296 aa23.61■■□□□ 1.37
PNKP-209ENST00000596726 ARHGEF15O94989 841 aa23.61■■□□□ 1.37
PNKP-209ENST00000596726 LYPLA2O95372 231 aa23.61■■□□□ 1.37
PNKP-209ENST00000596726 NPEPPSP55786 919 aa23.61■■□□□ 1.37
PNKP-209ENST00000596726 NLRP11P59045 1033 aaKnown RBP23.61■■□□□ 1.37
PNKP-209ENST00000596726 HTRA4P83105 476 aaPredicted RBP23.61■■□□□ 1.37
PNKP-209ENST00000596726 TAP1Q03518 808 aa23.61■■□□□ 1.37
PNKP-209ENST00000596726 PAK2Q13177 524 aa23.61■■□□□ 1.37
PNKP-209ENST00000596726 DRP2Q13474 957 aa23.61■■□□□ 1.37
PNKP-209ENST00000596726 NBR1Q14596 966 aa23.61■■□□□ 1.37
PNKP-209ENST00000596726 RTN4RL1Q86UN2 441 aaPredicted RBP23.61■■□□□ 1.37
PNKP-209ENST00000596726 ZNF579Q8NAF0 562 aaKnown RBP23.61■■□□□ 1.37
PNKP-209ENST00000596726 LINC01599Q8WXQ3 324 aa23.61■■□□□ 1.37
PNKP-209ENST00000596726 MYLIPQ8WY64 445 aa23.61■■□□□ 1.37
PNKP-209ENST00000596726 OSMRQ99650 979 aa23.61■■□□□ 1.37
PNKP-209ENST00000596726 FTHL17Q9BXU8 183 aa23.61■■□□□ 1.37
PNKP-209ENST00000596726 TMX1Q9H3N1 280 aa23.61■■□□□ 1.37
PNKP-209ENST00000596726 AKT3Q9Y243 479 aa23.61■■□□□ 1.37
PNKP-209ENST00000596726 GINS2Q9Y248 185 aa23.61■■□□□ 1.37
PNKP-209ENST00000596726 PCDHB6Q9Y5E3 794 aa23.61■■□□□ 1.37
PNKP-209ENST00000596726 LCHNA4D1U4 455 aa23.6■■□□□ 1.37
PNKP-209ENST00000596726 YWHABP31946 246 aaKnown RBP23.6■■□□□ 1.37
PNKP-209ENST00000596726 LARP1BQ659C4 914 aaKnown RBP23.6■■□□□ 1.37
PNKP-209ENST00000596726 MCTP1Q6DN14 999 aa23.6■■□□□ 1.37
PNKP-209ENST00000596726 OTUD6AQ7L8S5 288 aa23.6■■□□□ 1.37
PNKP-209ENST00000596726 TPH2Q8IWU9 490 aa23.6■■□□□ 1.37
PNKP-209ENST00000596726 PPP1R16BQ96T49 567 aa23.6■■□□□ 1.37
PNKP-209ENST00000596726 INSL6Q9Y581 213 aa23.6■■□□□ 1.37
PNKP-209ENST00000596726 ZBTB39O15060 712 aa23.59■■□□□ 1.37
PNKP-209ENST00000596726 RPS6KA5O75582 802 aa23.59■■□□□ 1.37
PNKP-209ENST00000596726 TECP42680 631 aa23.59■■□□□ 1.37
PNKP-209ENST00000596726 GPC3P51654 580 aa23.59■■□□□ 1.37
PNKP-209ENST00000596726 TMEM266Q2M3C6 531 aa23.59■■□□□ 1.37
PNKP-209ENST00000596726 FAM117BQ6P1L5 589 aa23.59■■□□□ 1.37
PNKP-209ENST00000596726 CEP170P1Q96L14 293 aa23.59■■□□□ 1.37
PNKP-209ENST00000596726 JPH2Q9BR39 696 aaPredicted RBP23.59■■□□□ 1.37
PNKP-209ENST00000596726 DHX33Q9H6R0 707 aaKnown RBP23.59■■□□□ 1.37
PNKP-209ENST00000596726 TRANK1O15050 2925 aa23.59■■□□□ 1.37
PNKP-209ENST00000596726 DNM2P50570 870 aa23.58■■□□□ 1.37
PNKP-209ENST00000596726 ODR4Q5SWX8 454 aa23.58■■□□□ 1.37
PNKP-209ENST00000596726 FAM228AQ86W67 206 aa23.58■■□□□ 1.37
PNKP-209ENST00000596726 EXOC8Q8IYI6 725 aa23.58■■□□□ 1.37
PNKP-209ENST00000596726 INTS4Q96HW7 963 aaKnown RBP23.58■■□□□ 1.37
PNKP-209ENST00000596726 TSPYL2Q9H2G4 693 aaPredicted RBP23.58■■□□□ 1.37
PNKP-209ENST00000596726 PRDM12Q9H4Q4 367 aa23.58■■□□□ 1.37
PNKP-209ENST00000596726 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.58■■□□□ 1.37
PNKP-209ENST00000596726 ST3GAL5Q9UNP4 418 aa23.58■■□□□ 1.37
PNKP-209ENST00000596726 COL4A6Q14031 1691 aa23.57■■□□□ 1.36
PNKP-209ENST00000596726 K7ELQ4 463 aaPredicted RBP23.57■■□□□ 1.36
PNKP-209ENST00000596726 GPR182O15218 404 aa23.57■■□□□ 1.36
PNKP-209ENST00000596726 UPP2O95045 317 aa23.57■■□□□ 1.36
PNKP-209ENST00000596726 SPATA31C1P0DKV0 1188 aa23.57■■□□□ 1.36
PNKP-209ENST00000596726 EIF4BP23588 611 aaKnown RBP23.57■■□□□ 1.36
PNKP-209ENST00000596726 RFC5P40937 340 aa23.57■■□□□ 1.36
PNKP-209ENST00000596726 FXR2P51116 673 aaKnown RBP eCLIP23.57■■□□□ 1.36
PNKP-209ENST00000596726 CDC42EP1Q00587 391 aa23.57■■□□□ 1.36
PNKP-209ENST00000596726 NFX1Q12986 1120 aaKnown RBP23.57■■□□□ 1.36
PNKP-209ENST00000596726 PTGDRQ13258 359 aa23.57■■□□□ 1.36
PNKP-209ENST00000596726 RILPL1Q5EBL4 403 aa23.57■■□□□ 1.36
PNKP-209ENST00000596726 CRIPAKQ8N1N5 446 aa23.57■■□□□ 1.36
PNKP-209ENST00000596726 SP7Q8TDD2 431 aaPredicted RBP23.57■■□□□ 1.36
PNKP-209ENST00000596726 SNX21Q969T3 373 aa23.57■■□□□ 1.36
PNKP-209ENST00000596726 ANKEF1Q9NU02 776 aa23.57■■□□□ 1.36
PNKP-209ENST00000596726 XKR9Q5GH70 373 aa23.56■■□□□ 1.36
PNKP-209ENST00000596726 SLC7A3Q8WY07 619 aa23.56■■□□□ 1.36
PNKP-209ENST00000596726 POLR3CQ9BUI4 534 aaPredicted RBP23.56■■□□□ 1.36
PNKP-209ENST00000596726 TUFT1Q9NNX1 390 aa23.56■■□□□ 1.36
PNKP-209ENST00000596726 SUCLA2Q9P2R7 463 aaPredicted RBP23.56■■□□□ 1.36
PNKP-209ENST00000596726 LINC01553A4QN01 128 aa23.55■■□□□ 1.36
PNKP-209ENST00000596726 LAD1O00515 517 aa23.55■■□□□ 1.36
PNKP-209ENST00000596726 MGEA5O60502 916 aa23.55■■□□□ 1.36
PNKP-209ENST00000596726 MED24O75448 989 aa23.55■■□□□ 1.36
PNKP-209ENST00000596726 XRCC6P12956 609 aaKnown RBP eCLIP23.55■■□□□ 1.36
PNKP-209ENST00000596726 DARSP14868 501 aaKnown RBP23.55■■□□□ 1.36
PNKP-209ENST00000596726 FOSL2P15408 326 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms