RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 CRYBB1P53674 252 aaPredicted RBP20.76■□□□□ 0.91
SHKBP1-202ENST00000593764 TBC1D8BQ0IIM8 1120 aa20.76■□□□□ 0.91
SHKBP1-202ENST00000593764 PAK2Q13177 524 aa20.76■□□□□ 0.91
SHKBP1-202ENST00000593764 CALCRLQ16602 461 aa20.76■□□□□ 0.91
SHKBP1-202ENST00000593764 MTERF2Q49AM1 385 aa20.76■□□□□ 0.91
SHKBP1-202ENST00000593764 CRIPAKQ8N1N5 446 aa20.76■□□□□ 0.91
SHKBP1-202ENST00000593764 SLC17A8Q8NDX2 589 aa20.76■□□□□ 0.91
SHKBP1-202ENST00000593764 ARNTL2Q8WYA1 636 aa20.76■□□□□ 0.91
SHKBP1-202ENST00000593764 TMEM60Q9H2L4 133 aa20.76■□□□□ 0.91
SHKBP1-202ENST00000593764 ADAMTS10Q9H324 1103 aa20.76■□□□□ 0.91
SHKBP1-202ENST00000593764 ERVK-5Q9HDB9 667 aa20.76■□□□□ 0.91
SHKBP1-202ENST00000593764 RGL1Q9NZL6 768 aa20.76■□□□□ 0.91
SHKBP1-202ENST00000593764 PCDHA12Q9UN75 941 aa20.76■□□□□ 0.91
SHKBP1-202ENST00000593764 IGKV6-21A0A0C4DH24 114 aa20.75■□□□□ 0.91
SHKBP1-202ENST00000593764 TMOD1P28289 359 aa20.75■□□□□ 0.91
SHKBP1-202ENST00000593764 ERVK-21P61565 698 aa20.75■□□□□ 0.91
SHKBP1-202ENST00000593764 DRP2Q13474 957 aa20.75■□□□□ 0.91
SHKBP1-202ENST00000593764 NCAPH2Q6IBW4 605 aa20.75■□□□□ 0.91
SHKBP1-202ENST00000593764 OSMRQ99650 979 aa20.75■□□□□ 0.91
SHKBP1-202ENST00000593764 FTHL17Q9BXU8 183 aa20.75■□□□□ 0.91
SHKBP1-202ENST00000593764 BACH2Q9BYV9 841 aa20.75■□□□□ 0.91
SHKBP1-202ENST00000593764 TSPYL2Q9H2G4 693 aaPredicted RBP20.75■□□□□ 0.91
SHKBP1-202ENST00000593764 SUGCTQ9HAC7 445 aa20.75■□□□□ 0.91
SHKBP1-202ENST00000593764 RPS6KA5O75582 802 aa20.74■□□□□ 0.91
SHKBP1-202ENST00000593764 ATP2B1P20020 1258 aa20.74■□□□□ 0.91
SHKBP1-202ENST00000593764 POU3F3P20264 500 aaPredicted RBP20.74■□□□□ 0.91
SHKBP1-202ENST00000593764 IGFBP4P22692 258 aa20.74■□□□□ 0.91
SHKBP1-202ENST00000593764 NLRP11P59045 1033 aaKnown RBP20.74■□□□□ 0.91
SHKBP1-202ENST00000593764 C4orf19Q8IY42 314 aa20.74■□□□□ 0.91
SHKBP1-202ENST00000593764 ZNF579Q8NAF0 562 aaKnown RBP20.74■□□□□ 0.91
SHKBP1-202ENST00000593764 DYDC2Q96IM9 177 aa20.74■□□□□ 0.91
SHKBP1-202ENST00000593764 TGS1Q96RS0 853 aaKnown RBP20.74■□□□□ 0.91
SHKBP1-202ENST00000593764 MAP7D2Q96T17 732 aa20.74■□□□□ 0.91
SHKBP1-202ENST00000593764 YME1L1Q96TA2 773 aa20.74■□□□□ 0.91
SHKBP1-202ENST00000593764 TTC12Q9H892 705 aaPredicted RBP20.74■□□□□ 0.91
SHKBP1-202ENST00000593764 ST3GAL5Q9UNP4 418 aa20.74■□□□□ 0.91
SHKBP1-202ENST00000593764 AKT3Q9Y243 479 aa20.74■□□□□ 0.91
SHKBP1-202ENST00000593764 PRRC2BQ5JSZ5 2229 aaKnown RBP20.73■□□□□ 0.91
SHKBP1-202ENST00000593764 MGEA5O60502 916 aa20.73■□□□□ 0.91
SHKBP1-202ENST00000593764 LPXNO60711 386 aa20.73■□□□□ 0.91
SHKBP1-202ENST00000593764 SLITRK3O94933 977 aa20.73■□□□□ 0.91
SHKBP1-202ENST00000593764 U2AF2P26368 475 aaKnown RBP eCLIP20.73■□□□□ 0.91
SHKBP1-202ENST00000593764 MCM7P33993 719 aa20.73■□□□□ 0.91
SHKBP1-202ENST00000593764 TXKP42681 527 aa20.73■□□□□ 0.91
SHKBP1-202ENST00000593764 MCM2P49736 904 aa20.73■□□□□ 0.91
SHKBP1-202ENST00000593764 NPEPPSP55786 919 aa20.73■□□□□ 0.91
SHKBP1-202ENST00000593764 NFX1Q12986 1120 aaKnown RBP20.73■□□□□ 0.91
SHKBP1-202ENST00000593764 PLA2G4FQ68DD2 849 aa20.73■□□□□ 0.91
SHKBP1-202ENST00000593764 FAM228AQ86W67 206 aa20.73■□□□□ 0.91
SHKBP1-202ENST00000593764 NOSTRINQ8IVI9 506 aa20.73■□□□□ 0.91
SHKBP1-202ENST00000593764 HSD17B14Q9BPX1 270 aa20.73■□□□□ 0.91
SHKBP1-202ENST00000593764 LXNQ9BS40 222 aa20.73■□□□□ 0.91
SHKBP1-202ENST00000593764 RC3H2Q9HBD1 1191 aaKnown RBP20.73■□□□□ 0.91
SHKBP1-202ENST00000593764 CYP26B1Q9NR63 512 aa20.73■□□□□ 0.91
SHKBP1-202ENST00000593764 ZBTB39O15060 712 aa20.72■□□□□ 0.91
SHKBP1-202ENST00000593764 GPR182O15218 404 aa20.72■□□□□ 0.91
SHKBP1-202ENST00000593764 DKC1O60832 514 aaKnown RBP eCLIP20.72■□□□□ 0.91
SHKBP1-202ENST00000593764 MAFO75444 373 aaPredicted RBP20.72■□□□□ 0.91
SHKBP1-202ENST00000593764 GPC3P51654 580 aa20.72■□□□□ 0.91
SHKBP1-202ENST00000593764 CTTNQ14247 550 aaKnown RBP20.72■□□□□ 0.91
SHKBP1-202ENST00000593764 ZNF710Q8N1W2 664 aa20.72■□□□□ 0.91
SHKBP1-202ENST00000593764 ZNF668Q96K58 619 aaPredicted RBP20.72■□□□□ 0.91
SHKBP1-202ENST00000593764 EIF2AK1Q9BQI3 630 aaKnown RBP20.72■□□□□ 0.91
SHKBP1-202ENST00000593764 MTCH2Q9Y6C9 303 aa20.72■□□□□ 0.91
SHKBP1-202ENST00000593764 CYP4A11Q02928 519 aa20.71■□□□□ 0.91
SHKBP1-202ENST00000593764 GRB10Q13322 594 aa20.71■□□□□ 0.91
SHKBP1-202ENST00000593764 ZNF174Q15697 407 aa20.71■□□□□ 0.91
SHKBP1-202ENST00000593764 FAM43BQ6ZT52 329 aaPredicted RBP20.71■□□□□ 0.91
SHKBP1-202ENST00000593764 ZNF689Q96CS4 500 aaPredicted RBP20.71■□□□□ 0.91
SHKBP1-202ENST00000593764 C17orf80Q9BSJ5 609 aa20.71■□□□□ 0.91
SHKBP1-202ENST00000593764 ZSWIM4Q9H7M6 989 aa20.71■□□□□ 0.91
SHKBP1-202ENST00000593764 MTUS1Q9ULD2 1270 aa20.71■□□□□ 0.91
SHKBP1-202ENST00000593764 SPTBN5Q9NRC6 3674 aaKnown RBP20.71■□□□□ 0.91
SHKBP1-202ENST00000593764 VCANP13611 3396 aa20.71■□□□□ 0.91
SHKBP1-202ENST00000593764 DGKIO75912 1065 aa20.7■□□□□ 0.9
SHKBP1-202ENST00000593764 EIF4BP23588 611 aaKnown RBP20.7■□□□□ 0.9
SHKBP1-202ENST00000593764 YWHABP31946 246 aaKnown RBP20.7■□□□□ 0.9
SHKBP1-202ENST00000593764 DSC3Q14574 896 aa20.7■□□□□ 0.9
SHKBP1-202ENST00000593764 ODR4Q5SWX8 454 aa20.7■□□□□ 0.9
SHKBP1-202ENST00000593764 TPH2Q8IWU9 490 aa20.7■□□□□ 0.9
SHKBP1-202ENST00000593764 C4orf32Q8N8J7 132 aa20.7■□□□□ 0.9
SHKBP1-202ENST00000593764 CEP170P1Q96L14 293 aa20.7■□□□□ 0.9
SHKBP1-202ENST00000593764 ADAM2Q99965 735 aa20.7■□□□□ 0.9
SHKBP1-202ENST00000593764 DHX33Q9H6R0 707 aaKnown RBP20.7■□□□□ 0.9
SHKBP1-202ENST00000593764 RGS18Q9NS28 235 aa20.7■□□□□ 0.9
SHKBP1-202ENST00000593764 COL4A6Q14031 1691 aa20.7■□□□□ 0.9
SHKBP1-202ENST00000593764 POTEMA6NI47 508 aa20.69■□□□□ 0.9
SHKBP1-202ENST00000593764 LYPLA2O95372 231 aa20.69■□□□□ 0.9
SHKBP1-202ENST00000593764 LINC00271P0C7V0 271 aa20.69■□□□□ 0.9
SHKBP1-202ENST00000593764 DARSP14868 501 aaKnown RBP20.69■□□□□ 0.9
SHKBP1-202ENST00000593764 GJB2P29033 226 aa20.69■□□□□ 0.9
SHKBP1-202ENST00000593764 TRAPPC10P48553 1259 aa20.69■□□□□ 0.9
SHKBP1-202ENST00000593764 TOB1P50616 345 aaPredicted RBP20.69■□□□□ 0.9
SHKBP1-202ENST00000593764 ORC2Q13416 577 aaPredicted RBP20.69■□□□□ 0.9
SHKBP1-202ENST00000593764 GNL2Q13823 731 aaKnown RBP20.69■□□□□ 0.9
SHKBP1-202ENST00000593764 CCDC85BQ15834 202 aaPredicted RBP20.69■□□□□ 0.9
SHKBP1-202ENST00000593764 TTC38Q5R3I4 469 aa20.69■□□□□ 0.9
SHKBP1-202ENST00000593764 NPAS4Q8IUM7 802 aa20.69■□□□□ 0.9
SHKBP1-202ENST00000593764 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.69■□□□□ 0.9
SHKBP1-202ENST00000593764 GDPD5Q8WTR4 605 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 329.3 ms