RNA–Protein interactions for RNA: ENST00000592320.6

GFAP-222, Transcript of glial fibrillary acidic protein, human

TSL 5

Gene GFAP, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFAP-222	ENST00000592320	ZNF202	O95125	648 aa		13.4	□□□□□ -0.26
GFAP-222	ENST00000592320	PLA2G4B	P0C869	781 aa		13.4	□□□□□ -0.26
GFAP-222	ENST00000592320	SMIM10L2A	P0DMW4	78 aa		13.4	□□□□□ -0.26
GFAP-222	ENST00000592320	SMIM10L2B	P0DMW5	78 aa		13.4	□□□□□ -0.26
GFAP-222	ENST00000592320	CHMP4BP1	P59074	171 aa		13.4	□□□□□ -0.26
GFAP-222	ENST00000592320	PPFIA1	Q13136	1202 aa		13.4	□□□□□ -0.26
GFAP-222	ENST00000592320	SNW1	Q13573	536 aa	Known RBP	13.4	□□□□□ -0.26
GFAP-222	ENST00000592320	XKR9	Q5GH70	373 aa		13.4	□□□□□ -0.26
GFAP-222	ENST00000592320	ZNF484	Q5JVG2	852 aa		13.4	□□□□□ -0.26
GFAP-222	ENST00000592320	C1orf53	Q5VUE5	145 aa		13.4	□□□□□ -0.26
GFAP-222	ENST00000592320	PLA2G4F	Q68DD2	849 aa		13.4	□□□□□ -0.26
GFAP-222	ENST00000592320	CEP57L1	Q8IYX8	460 aa		13.4	□□□□□ -0.26
GFAP-222	ENST00000592320	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.4	□□□□□ -0.26
GFAP-222	ENST00000592320	PPM1E	Q8WY54	764 aa		13.4	□□□□□ -0.26
GFAP-222	ENST00000592320	LARP4B	Q92615	738 aa	Known RBP	13.4	□□□□□ -0.26
GFAP-222	ENST00000592320	VTI1A	Q96AJ9	217 aa		13.4	□□□□□ -0.26
GFAP-222	ENST00000592320	CEP170P1	Q96L14	293 aa		13.4	□□□□□ -0.26
GFAP-222	ENST00000592320	BHMT2	Q9H2M3	363 aa		13.4	□□□□□ -0.26
GFAP-222	ENST00000592320	ZNF576	Q9H609	170 aa		13.4	□□□□□ -0.26
GFAP-222	ENST00000592320	MAGEF1	Q9HAY2	307 aa		13.4	□□□□□ -0.26
GFAP-222	ENST00000592320	CYP26B1	Q9NR63	512 aa		13.4	□□□□□ -0.26
GFAP-222	ENST00000592320	ACTN4	O43707	911 aa	Known RBP	13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	KIN	O60870	393 aa	Known RBP	13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	NR1I2	O75469	434 aa		13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	MBD3	O95983	291 aa		13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	SSB	P05455	408 aa	Known RBP eCLIP	13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	CLTB	P09497	229 aa		13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	SLFN14	P0C7P3	912 aa		13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	INSRR	P14616	1297 aa		13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	ITGB8	P26012	769 aa		13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	RARRES1	P49788	294 aa		13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	EPHB4	P54760	987 aa		13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	SLC12A3	P55017	1021 aa		13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	NPEPPS	P55786	919 aa		13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	TLE2	Q04725	743 aa		13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	MCM6	Q14566	821 aa		13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	TARBP2	Q15633	366 aa	Known RBP	13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	GRIK4	Q16099	956 aa		13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	NBPF20	Q3BBV1	942 aa		13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	MTERF2	Q49AM1	385 aa		13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	SV2B	Q7L1I2	683 aa		13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	C7orf31	Q8N865	590 aa		13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	SYT2	Q8N9I0	419 aa	Predicted RBP	13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	ADAMTS19	Q8TE59	1207 aa		13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	GAS2L1	Q99501	681 aa	Predicted RBP	13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	STARD7	Q9NQZ5	370 aa		13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	SERTAD1	Q9UHV2	236 aa		13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	COL1A2	P08123	1366 aa		13.39	□□□□□ -0.27
GFAP-222	ENST00000592320	NRCAM	Q92823	1304 aa		13.39	□□□□□ -0.27
GFAP-222	ENST00000592320		A0A0U1RQG5	324 aa	Predicted RBP	13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	RRN3P2	A6NIE6	340 aa		13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	ZBTB42	B2RXF5	422 aa		13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	GNAT1	P11488	350 aa		13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	RAG1	P15918	1043 aa		13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	FPGS	Q05932	587 aa		13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	ITGA7	Q13683	1181 aa		13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	NFKBIB	Q15653	356 aa		13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	LONRF3	Q496Y0	759 aa		13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	NFRKB	Q6P4R8	1299 aa		13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	PADI6	Q6TGC4	694 aa		13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	KRBA2	Q6ZNG9	492 aa		13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	SESTD1	Q86VW0	696 aa		13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	CNNM3	Q8NE01	707 aa		13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	GPT2	Q8TD30	523 aa		13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	CCDC34	Q96HJ3	373 aa		13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	TIGD1	Q96MW7	591 aa		13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	ASB2	Q96Q27	587 aa		13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	SEZ6L	Q9BYH1	1024 aa		13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	TNMD	Q9H2S6	317 aa		13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	DACT1	Q9NYF0	836 aa		13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	THEG	Q9P2T0	379 aa		13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	HDAC6	Q9UBN7	1215 aa		13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	GRIN2D	O15399	1336 aa		13.38	□□□□□ -0.27
GFAP-222	ENST00000592320	C17orf102	A2RUQ5	167 aa		13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	USO1	O60763	962 aa	Known RBP	13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	DGAT1	O75907	488 aa		13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	HOXC8	P31273	242 aa		13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	RFC5	P40937	340 aa		13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	IGBP1	P78318	339 aa		13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	AMPD3	Q01432	767 aa		13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	PTPN11	Q06124	597 aa	Predicted RBP	13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	TBC1D8B	Q0IIM8	1120 aa		13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	DHX8	Q14562	1220 aa	Known RBP	13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	FAM47C	Q5HY64	1035 aa		13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	KANK3	Q6NY19	840 aa		13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	GPBP1	Q86WP2	473 aa		13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	EXOC8	Q8IYI6	725 aa		13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	LMBR1	Q8WVP7	490 aa		13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	TRAPPC12	Q8WVT3	735 aa		13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	TIFA	Q96CG3	184 aa		13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	PAGE5	Q96GU1	130 aa		13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	CEP89	Q96ST8	783 aa		13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	UHRF1	Q96T88	793 aa	Predicted RBP	13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	JPH2	Q9BR39	696 aa	Predicted RBP	13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	SH2D3A	Q9BRG2	576 aa		13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	RUSC1	Q9BVN2	902 aa		13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	LRRC27	Q9C0I9	530 aa		13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	SETD4	Q9NVD3	440 aa		13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	KBTBD4	Q9NVX7	518 aa		13.37	□□□□□ -0.27
GFAP-222	ENST00000592320	KCND2	Q9NZV8	630 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms