RNA–Protein interactions for RNA: ENST00000588454.5

CALR-206, Transcript of calreticulin, humanhuman

TSL 3

Gene CALR, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-206ENST00000588454 MTMR3Q13615 1198 aa12.64□□□□□ -0.39
CALR-206ENST00000588454 DSC3Q14574 896 aa12.64□□□□□ -0.39
CALR-206ENST00000588454 ZNF484Q5JVG2 852 aa12.64□□□□□ -0.39
CALR-206ENST00000588454 LLGL2Q6P1M3 1020 aa12.64□□□□□ -0.39
CALR-206ENST00000588454 KCNT2Q6UVM3 1135 aa12.64□□□□□ -0.39
CALR-206ENST00000588454 ABHD15Q6UXT9 468 aa12.64□□□□□ -0.39
CALR-206ENST00000588454 LRRC55Q6ZSA7 311 aa12.64□□□□□ -0.39
CALR-206ENST00000588454 CMTR1Q8N1G2 835 aaKnown RBP12.64□□□□□ -0.39
CALR-206ENST00000588454 TMTC2Q8N394 836 aa12.64□□□□□ -0.39
CALR-206ENST00000588454 TMEM105Q8N8V8 129 aa12.64□□□□□ -0.39
CALR-206ENST00000588454 RUFY2Q8WXA3 655 aa12.64□□□□□ -0.39
CALR-206ENST00000588454 CASP10Q92851 521 aa12.64□□□□□ -0.39
CALR-206ENST00000588454 NECTIN4Q96NY8 510 aa12.64□□□□□ -0.39
CALR-206ENST00000588454 TCF25Q9BQ70 676 aa12.64□□□□□ -0.39
CALR-206ENST00000588454 TMEM117Q9H0C3 514 aa12.64□□□□□ -0.39
CALR-206ENST00000588454 ADAM7Q9H2U9 754 aa12.64□□□□□ -0.39
CALR-206ENST00000588454 ENTPD7Q9NQZ7 604 aa12.64□□□□□ -0.39
CALR-206ENST00000588454 DNAH14Q0VDD8 3507 aa12.64□□□□□ -0.39
CALR-206ENST00000588454 ZBTB42B2RXF5 422 aa12.63□□□□□ -0.39
CALR-206ENST00000588454 C2CD4DB7Z1M9 353 aa12.63□□□□□ -0.39
CALR-206ENST00000588454 MEIS1O00470 390 aa12.63□□□□□ -0.39
CALR-206ENST00000588454 FGFR1P11362 822 aa12.63□□□□□ -0.39
CALR-206ENST00000588454 SP100P23497 879 aaPredicted RBP12.63□□□□□ -0.39
CALR-206ENST00000588454 CHMLP26374 656 aa12.63□□□□□ -0.39
CALR-206ENST00000588454 KRT17Q04695 432 aa12.63□□□□□ -0.39
CALR-206ENST00000588454 ITIH3Q06033 890 aa12.63□□□□□ -0.39
CALR-206ENST00000588454 TPRNQ4KMQ1 711 aa12.63□□□□□ -0.39
CALR-206ENST00000588454 CEP55Q53EZ4 464 aa12.63□□□□□ -0.39
CALR-206ENST00000588454 CES5AQ6NT32 575 aa12.63□□□□□ -0.39
CALR-206ENST00000588454 TMC7Q7Z402 723 aa12.63□□□□□ -0.39
CALR-206ENST00000588454 FAM228AQ86W67 206 aa12.63□□□□□ -0.39
CALR-206ENST00000588454 MRPL43Q8N983 215 aaKnown RBP12.63□□□□□ -0.39
CALR-206ENST00000588454 MAP4K1Q92918 833 aa12.63□□□□□ -0.39
CALR-206ENST00000588454 CASD1Q96PB1 797 aa12.63□□□□□ -0.39
CALR-206ENST00000588454 POMKQ9H5K3 350 aa12.63□□□□□ -0.39
CALR-206ENST00000588454 AGO4Q9HCK5 861 aaKnown RBP12.63□□□□□ -0.39
CALR-206ENST00000588454 TSHZ2Q9NRE2 1034 aa12.63□□□□□ -0.39
CALR-206ENST00000588454 RNF19AQ9NV58 838 aa12.63□□□□□ -0.39
CALR-206ENST00000588454 COL1A2P08123 1366 aa12.63□□□□□ -0.39
CALR-206ENST00000588454 MYH9P35579 1960 aaKnown RBP12.62□□□□□ -0.39
CALR-206ENST00000588454 hCG_1642624A0A1W2PR95 340 aa12.62□□□□□ -0.39
CALR-206ENST00000588454 HOXA2O43364 376 aa12.62□□□□□ -0.39
CALR-206ENST00000588454 GPR32O75388 356 aa12.62□□□□□ -0.39
CALR-206ENST00000588454 CCNE2O96020 404 aa12.62□□□□□ -0.39
CALR-206ENST00000588454 CALM1P0DP23 149 aa12.62□□□□□ -0.39
CALR-206ENST00000588454 CALM2P0DP24 149 aa12.62□□□□□ -0.39
CALR-206ENST00000588454 CALM3P0DP25 149 aa12.62□□□□□ -0.39
CALR-206ENST00000588454 PPM1AP35813 382 aa12.62□□□□□ -0.39
CALR-206ENST00000588454 LIFRP42702 1097 aa12.62□□□□□ -0.39
CALR-206ENST00000588454 KIZQ2M2Z5 673 aa12.62□□□□□ -0.39
CALR-206ENST00000588454 TTC22Q5TAA0 569 aa12.62□□□□□ -0.39
CALR-206ENST00000588454 FAM160B1Q5W0V3 765 aa12.62□□□□□ -0.39
CALR-206ENST00000588454 ASTLQ6HA08 431 aaPredicted RBP12.62□□□□□ -0.39
CALR-206ENST00000588454 CASC1Q6TDU7 716 aa12.62□□□□□ -0.39
CALR-206ENST00000588454 TEX2Q8IWB9 1127 aa12.62□□□□□ -0.39
CALR-206ENST00000588454 ZNF558Q96NG5 402 aa12.62□□□□□ -0.39
CALR-206ENST00000588454 OSMRQ99650 979 aa12.62□□□□□ -0.39
CALR-206ENST00000588454 SPG21Q9NZD8 308 aa12.62□□□□□ -0.39
CALR-206ENST00000588454 CDH22Q9UJ99 828 aa12.62□□□□□ -0.39
CALR-206ENST00000588454 HCFC2Q9Y5Z7 792 aa12.62□□□□□ -0.39
CALR-206ENST00000588454 C2orf71A6NGG8 1288 aa12.61□□□□□ -0.39
CALR-206ENST00000588454 CCDC69A6NI79 296 aa12.61□□□□□ -0.39
CALR-206ENST00000588454 SH2B2O14492 632 aaPredicted RBP12.61□□□□□ -0.39
CALR-206ENST00000588454 BACH1O14867 736 aa12.61□□□□□ -0.39
CALR-206ENST00000588454 PRC1O43663 620 aa12.61□□□□□ -0.39
CALR-206ENST00000588454 C22orf31O95567 290 aa12.61□□□□□ -0.39
CALR-206ENST00000588454 FOSP01100 380 aaPredicted RBP12.61□□□□□ -0.39
CALR-206ENST00000588454 RXRAP19793 462 aa12.61□□□□□ -0.39
CALR-206ENST00000588454 ATP4AP20648 1035 aa12.61□□□□□ -0.39
CALR-206ENST00000588454 MTHFRP42898 656 aa12.61□□□□□ -0.39
CALR-206ENST00000588454 CLCN5P51795 746 aa12.61□□□□□ -0.39
CALR-206ENST00000588454 SMC1AQ14683 1233 aaKnown RBP12.61□□□□□ -0.39
CALR-206ENST00000588454 NFXL1Q6ZNB6 911 aa12.61□□□□□ -0.39
CALR-206ENST00000588454 ERMP1Q7Z2K6 904 aa12.61□□□□□ -0.39
CALR-206ENST00000588454 CCDC60Q8IWA6 550 aaPredicted RBP12.61□□□□□ -0.39
CALR-206ENST00000588454 ZDHHC14Q8IZN3 488 aa12.61□□□□□ -0.39
CALR-206ENST00000588454 CCDC82Q8N4S0 544 aa12.61□□□□□ -0.39
CALR-206ENST00000588454 TMEM87BQ96K49 555 aa12.61□□□□□ -0.39
CALR-206ENST00000588454 RIC8AQ9NPQ8 531 aa12.61□□□□□ -0.39
CALR-206ENST00000588454 DHX15O43143 795 aaKnown RBP12.6□□□□□ -0.39
CALR-206ENST00000588454 SGSM2O43147 1006 aa12.6□□□□□ -0.39
CALR-206ENST00000588454 CLASP2O75122 1294 aaKnown RBP12.6□□□□□ -0.39
CALR-206ENST00000588454 MCM5P33992 734 aa12.6□□□□□ -0.39
CALR-206ENST00000588454 PBX3P40426 434 aa12.6□□□□□ -0.39
CALR-206ENST00000588454 SWSAP1Q6NVH7 229 aa12.6□□□□□ -0.39
CALR-206ENST00000588454 PDXDC2PQ6P474 469 aa12.6□□□□□ -0.39
CALR-206ENST00000588454 TMTC3Q6ZXV5 915 aa12.6□□□□□ -0.39
CALR-206ENST00000588454 NIPA1Q7RTP0 329 aa12.6□□□□□ -0.39
CALR-206ENST00000588454 HEATR3Q7Z4Q2 680 aa12.6□□□□□ -0.39
CALR-206ENST00000588454 FRMD5Q7Z6J6 570 aa12.6□□□□□ -0.39
CALR-206ENST00000588454 SLC39A11Q8N1S5 342 aa12.6□□□□□ -0.39
CALR-206ENST00000588454 LRRC43Q8N309 656 aa12.6□□□□□ -0.39
CALR-206ENST00000588454 FANCBQ8NB91 859 aa12.6□□□□□ -0.39
CALR-206ENST00000588454 NKD2Q969F2 451 aaPredicted RBP12.6□□□□□ -0.39
CALR-206ENST00000588454 SMOC2Q9H3U7 446 aa12.6□□□□□ -0.39
CALR-206ENST00000588454 ZNF302Q9NR11 478 aa12.6□□□□□ -0.39
CALR-206ENST00000588454 LIMD1Q9UGP4 676 aa12.6□□□□□ -0.39
CALR-206ENST00000588454 VTNP04004 478 aa12.59□□□□□ -0.39
CALR-206ENST00000588454 ASGR2P07307 311 aa12.59□□□□□ -0.39
CALR-206ENST00000588454 ZSCAN20P17040 1043 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms