RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 CHD4Q14839 1912 aa13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 DENND3A2RUS2 1198 aa13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 PDXKO00764 312 aa13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 OAS2P29728 719 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 PBX1P40424 430 aa13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 MIIPQ5JXC2 388 aa13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 PALMO75781 387 aa13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 GYS2P54840 703 aa13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 TRPM4Q8TD43 1214 aa13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 MMS19Q96T76 1030 aa13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 SELENOOQ9BVL4 669 aa13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 ABCB6Q9NP58 842 aa13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 ZCCHC17Q9NP64 241 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 TBC1D22BQ9NU19 505 aa13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 PPP1R9AQ9ULJ8 1098 aa13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 CASZ1Q86V15 1759 aa13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 BCRP11274 1271 aa13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 BACE1P56817 501 aa13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 DPY19L2Q6NUT2 758 aa13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 WDR59Q6PJI9 974 aa13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 APOBEC3FQ8IUX4 373 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 DNAJC7Q99615 494 aa13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 POLR3CQ9BUI4 534 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 RABEP2Q9H5N1 569 aa13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 C4AP0C0L4 1744 aa13.57□□□□□ -0.24
SMARCA4-208ENST00000585799 PITPNM2Q9BZ72 1349 aa13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 ITGB5P18084 799 aa13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 MXI1P50539 228 aa13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 SMC1AQ14683 1233 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 MOXD1Q6UVY6 613 aa13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 LRRC55Q6ZSA7 311 aa13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 HDXQ7Z353 690 aa13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 MAATS1Q7Z4T9 603 aa13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 USP37Q86T82 979 aa13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 SCYL3Q8IZE3 742 aa13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 NLGN2Q8NFZ4 835 aa13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 UCHL3P15374 230 aa13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 OSTNP61366 133 aa13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 DRAP1Q14919 205 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 GLYCTKQ8IVS8 523 aa13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 PROCA1Q8NCQ7 364 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 CHORDC1Q9UHD1 332 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 PLAGL2Q9UPG8 496 aa13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 TRPC6Q9Y210 931 aa13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 MORC2Q9Y6X9 1032 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 EMSYQ7Z589 1322 aa13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 MCM3P25205 808 aa13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 GUCY2FP51841 1108 aa13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 TUBB2AQ13885 445 aa13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 GOLGA5Q8TBA6 731 aa13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 TUBB2BQ9BVA1 445 aa13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 RANBP17Q9H2T7 1088 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 ACAD9Q9H845 621 aa13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 CAPN6Q9Y6Q1 641 aa13.56□□□□□ -0.24
SMARCA4-208ENST00000585799 RCCD1A6NED2 376 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 NFKBIEO00221 500 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 SPOPO43791 374 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 SRGAP2CP0DJJ0 459 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 PSMC5P62195 406 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 SEMA3FQ13275 785 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 CFAP221Q4G0U5 840 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 MTMR8Q96EF0 704 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 MS4A14Q96JA4 679 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 TEX13BQ9BXU2 312 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 PDE11AQ9HCR9 933 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 HOXC10Q9NYD6 342 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 JRKLQ9Y4A0 524 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 A0A087X0T9 212 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 DKC1O60832 514 aaKnown RBP eCLIP13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 FAM228BP0C875 321 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 BTNL9Q6UXG8 535 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 PAXIP1Q6ZW49 1069 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 ZBTB33Q86T24 672 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 LMBR1Q8WVP7 490 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 TMEM143Q96AN5 459 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 PDCD2LQ9BRP1 358 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 PACSIN1Q9BY11 444 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 COL20A1Q9P218 1284 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 PCDHA10Q9Y5I2 948 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 ATP9AO75110 1047 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 NPM3O75607 178 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 KCTD19Q17RG1 926 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 WDR44Q5JSH3 913 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 XXYLT1Q8NBI6 393 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 KRT12Q99456 494 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 RIPK3Q9Y572 518 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 TIAM2Q8IVF5 1701 aa13.55□□□□□ -0.24
SMARCA4-208ENST00000585799 PSAPP07602 524 aa13.54□□□□□ -0.24
SMARCA4-208ENST00000585799 TCP1P17987 556 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-208ENST00000585799 RPS12P25398 132 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-208ENST00000585799 SSTR3P32745 418 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-208ENST00000585799 KRT76Q01546 638 aa13.54□□□□□ -0.24
SMARCA4-208ENST00000585799 EDRF1Q3B7T1 1238 aa13.54□□□□□ -0.24
SMARCA4-208ENST00000585799 TRIM59Q8IWR1 403 aa13.54□□□□□ -0.24
SMARCA4-208ENST00000585799 SLC7A3Q8WY07 619 aa13.54□□□□□ -0.24
SMARCA4-208ENST00000585799 RIT2Q99578 217 aa13.54□□□□□ -0.24
SMARCA4-208ENST00000585799 CBWD1Q9BRT8 395 aa13.54□□□□□ -0.24
SMARCA4-208ENST00000585799 MOB2Q70IA6 237 aa13.54□□□□□ -0.24
SMARCA4-208ENST00000585799 FRMD5Q7Z6J6 570 aa13.54□□□□□ -0.24
SMARCA4-208ENST00000585799 FAM213AQ9BRX8 229 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms