RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	DVL2	O14641	736 aa		4.97	□□□□□ -1.61
PPP4R1-229	ENST00000584754	LAMTOR5	O43504	91 aa		4.97	□□□□□ -1.61
PPP4R1-229	ENST00000584754	CSF2RB	P32927	897 aa		4.97	□□□□□ -1.61
PPP4R1-229	ENST00000584754	KCNQ1	P51787	676 aa		4.97	□□□□□ -1.61
PPP4R1-229	ENST00000584754	PPP2CB	P62714	309 aa		4.97	□□□□□ -1.61
PPP4R1-229	ENST00000584754	PPP2CA	P67775	309 aa		4.97	□□□□□ -1.61
PPP4R1-229	ENST00000584754	IRF9	Q00978	393 aa		4.97	□□□□□ -1.61
PPP4R1-229	ENST00000584754	CD83	Q01151	205 aa		4.97	□□□□□ -1.61
PPP4R1-229	ENST00000584754	WDR72	Q3MJ13	1102 aa		4.97	□□□□□ -1.61
PPP4R1-229	ENST00000584754	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.97	□□□□□ -1.61
PPP4R1-229	ENST00000584754	CNNM4	Q6P4Q7	775 aa		4.97	□□□□□ -1.61
PPP4R1-229	ENST00000584754	HIPK4	Q8NE63	616 aa		4.97	□□□□□ -1.61
PPP4R1-229	ENST00000584754	GPATCH3	Q96I76	525 aa		4.97	□□□□□ -1.61
PPP4R1-229	ENST00000584754	GNRHR2	Q96P88	292 aa		4.97	□□□□□ -1.61
PPP4R1-229	ENST00000584754	GBP4	Q96PP9	640 aa		4.97	□□□□□ -1.61
PPP4R1-229	ENST00000584754	TARS2	Q9BW92	718 aa	Known RBP	4.97	□□□□□ -1.61
PPP4R1-229	ENST00000584754	SSBP3	Q9BWW4	388 aa	Predicted RBP	4.97	□□□□□ -1.61
PPP4R1-229	ENST00000584754	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
PPP4R1-229	ENST00000584754	KCNH7	Q9NS40	1196 aa		4.97	□□□□□ -1.61
PPP4R1-229	ENST00000584754	GALNT8	Q9NY28	637 aa		4.97	□□□□□ -1.61
PPP4R1-229	ENST00000584754	MAGEL2	Q9UJ55	1249 aa		4.97	□□□□□ -1.61
PPP4R1-229	ENST00000584754	ZKSCAN5	Q9Y2L8	839 aa		4.97	□□□□□ -1.61
PPP4R1-229	ENST00000584754	B3GALT1	Q9Y5Z6	326 aa		4.97	□□□□□ -1.61
PPP4R1-229	ENST00000584754	NPEPPSL1	A6NEC2	478 aa		4.96	□□□□□ -1.62
PPP4R1-229	ENST00000584754	TRAF5	O00463	557 aa		4.96	□□□□□ -1.62
PPP4R1-229	ENST00000584754	FOXP2	O15409	715 aa		4.96	□□□□□ -1.62
PPP4R1-229	ENST00000584754	GAS7	O60861	476 aa		4.96	□□□□□ -1.62
PPP4R1-229	ENST00000584754	JMJD7	P0C870	316 aa		4.96	□□□□□ -1.62
PPP4R1-229	ENST00000584754	AMPD3	Q01432	767 aa		4.96	□□□□□ -1.62
PPP4R1-229	ENST00000584754	ZNF827	Q17R98	1081 aa		4.96	□□□□□ -1.62
PPP4R1-229	ENST00000584754	ZXDC	Q2QGD7	858 aa	Predicted RBP	4.96	□□□□□ -1.62
PPP4R1-229	ENST00000584754	SPATS1	Q496A3	300 aa		4.96	□□□□□ -1.62
PPP4R1-229	ENST00000584754	CATSPERE	Q5SY80	951 aa		4.96	□□□□□ -1.62
PPP4R1-229	ENST00000584754	PIK3R6	Q5UE93	754 aa		4.96	□□□□□ -1.62
PPP4R1-229	ENST00000584754	RNF219	Q5W0B1	726 aa	Predicted RBP	4.96	□□□□□ -1.62
PPP4R1-229	ENST00000584754	CYB5RL	Q6IPT4	315 aa		4.96	□□□□□ -1.62
PPP4R1-229	ENST00000584754	ARHGEF18	Q6ZSZ5	1173 aa		4.96	□□□□□ -1.62
PPP4R1-229	ENST00000584754	NECAB2	Q7Z6G3	386 aa		4.96	□□□□□ -1.62
PPP4R1-229	ENST00000584754	RNF180	Q86T96	592 aa		4.96	□□□□□ -1.62
PPP4R1-229	ENST00000584754	DLG3	Q92796	817 aa		4.96	□□□□□ -1.62
PPP4R1-229	ENST00000584754	USP7	Q93009	1102 aa		4.96	□□□□□ -1.62
PPP4R1-229	ENST00000584754	C8orf49	Q96NF6	230 aa		4.96	□□□□□ -1.62
PPP4R1-229	ENST00000584754	LRRC37B	Q96QE4	947 aa		4.96	□□□□□ -1.62
PPP4R1-229	ENST00000584754	TTC1	Q99614	292 aa		4.96	□□□□□ -1.62
PPP4R1-229	ENST00000584754	HOMER2	Q9NSB8	354 aa		4.96	□□□□□ -1.62
PPP4R1-229	ENST00000584754	WIZ	O95785	1651 aa		4.96	□□□□□ -1.62
PPP4R1-229	ENST00000584754	CFTR	P13569	1480 aa		4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	ARAP1	Q96P48	1450 aa		4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	PTPDC1	A2A3K4	754 aa		4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	GPR42	O15529	346 aa		4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	CUTA	O60888	179 aa		4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	ECE1	P42892	770 aa		4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	MECP2	P51608	486 aa	Known RBP	4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	HERVK_113	P62684	666 aa		4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	EFEMP1	Q12805	493 aa		4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	ICAM4	Q14773	271 aa		4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	CDCA2	Q69YH5	1023 aa	Predicted RBP	4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	LARP4	Q71RC2	724 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	RALYL	Q86SE5	291 aa	Known RBP	4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	C11orf74	Q86VG3	221 aa		4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	REXO1L1P	Q8IX06	675 aa		4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	PRPF38A	Q8NAV1	312 aa	Known RBP	4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	CHST13	Q8NET6	341 aa		4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	ATL2	Q8NHH9	583 aa		4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	AJUBA	Q96IF1	538 aa		4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	KATNBL1	Q9H079	304 aa		4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	KIAA1683	Q9H0B3	1180 aa		4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	SMPD4	Q9NXE4	827 aa		4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	FBXO10	Q9UK96	956 aa		4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	APOBEC2	Q9Y235	224 aa	Known RBP	4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	ZNF608	Q9ULD9	1512 aa	Predicted RBP	4.95	□□□□□ -1.62
PPP4R1-229	ENST00000584754	GOLGA6L22	H0YM25	854 aa		4.94	□□□□□ -1.62
PPP4R1-229	ENST00000584754	CNOT4	O95628	575 aa	Known RBP	4.94	□□□□□ -1.62
PPP4R1-229	ENST00000584754	INSRR	P14616	1297 aa		4.94	□□□□□ -1.62
PPP4R1-229	ENST00000584754	POLD1	P28340	1107 aa		4.94	□□□□□ -1.62
PPP4R1-229	ENST00000584754	KIF11	P52732	1056 aa		4.94	□□□□□ -1.62
PPP4R1-229	ENST00000584754	EXOSC10	Q01780	885 aa	Known RBP	4.94	□□□□□ -1.62
PPP4R1-229	ENST00000584754	TOP3A	Q13472	1001 aa	Predicted RBP	4.94	□□□□□ -1.62
PPP4R1-229	ENST00000584754	PUM1	Q14671	1186 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
PPP4R1-229	ENST00000584754	TBR1	Q16650	682 aa		4.94	□□□□□ -1.62
PPP4R1-229	ENST00000584754	RNF151	Q2KHN1	245 aa		4.94	□□□□□ -1.62
PPP4R1-229	ENST00000584754	CXXC5	Q7LFL8	322 aa	Known RBP	4.94	□□□□□ -1.62
PPP4R1-229	ENST00000584754	OTOP2	Q7RTS6	562 aa		4.94	□□□□□ -1.62
PPP4R1-229	ENST00000584754	NXPE1	Q8N323	547 aa		4.94	□□□□□ -1.62
PPP4R1-229	ENST00000584754	AFAP1L2	Q8N4X5	818 aa		4.94	□□□□□ -1.62
PPP4R1-229	ENST00000584754	CALML6	Q8TD86	181 aa		4.94	□□□□□ -1.62
PPP4R1-229	ENST00000584754	LEO1	Q8WVC0	666 aa	Predicted RBP	4.94	□□□□□ -1.62
PPP4R1-229	ENST00000584754	E2F7	Q96AV8	911 aa		4.94	□□□□□ -1.62
PPP4R1-229	ENST00000584754	CARD11	Q9BXL7	1154 aa		4.94	□□□□□ -1.62
PPP4R1-229	ENST00000584754	MEGF9	Q9H1U4	602 aa		4.94	□□□□□ -1.62
PPP4R1-229	ENST00000584754	IFT22	Q9H7X7	185 aa		4.94	□□□□□ -1.62
PPP4R1-229	ENST00000584754	DDX56	Q9NY93	547 aa	Known RBP	4.94	□□□□□ -1.62
PPP4R1-229	ENST00000584754	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.94	□□□□□ -1.62
PPP4R1-229	ENST00000584754	CHD1	O14646	1710 aa		4.93	□□□□□ -1.62
PPP4R1-229	ENST00000584754	KPNA6	O60684	536 aa		4.93	□□□□□ -1.62
PPP4R1-229	ENST00000584754	ULK1	O75385	1050 aa		4.93	□□□□□ -1.62
PPP4R1-229	ENST00000584754	S100B	P04271	92 aa	Predicted RBP	4.93	□□□□□ -1.62
PPP4R1-229	ENST00000584754	SLC9A1	P19634	815 aa		4.93	□□□□□ -1.62
PPP4R1-229	ENST00000584754	PTX3	P26022	381 aa	Predicted RBP	4.93	□□□□□ -1.62
PPP4R1-229	ENST00000584754	MAGEA10	P43363	369 aa	Predicted RBP	4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms