RNA–Protein interactions for RNA: ENST00000583903.5

PPP4R1-226, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-226ENST00000583903 LHX6Q9UPM6 363 aa8.09□□□□□ -1.11
PPP4R1-226ENST00000583903 CDY2AQ9Y6F7 541 aa8.09□□□□□ -1.11
PPP4R1-226ENST00000583903 SQORQ9Y6N5 450 aa8.09□□□□□ -1.11
PPP4R1-226ENST00000583903 NRCAMQ92823 1304 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 SRRM3A6NNA2 597 aaPredicted RBP8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 ZNF213O14771 459 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 EPB41L2O43491 1005 aaKnown RBP8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 LRP3O75074 770 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 FGRP09769 529 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 TGFB3P10600 412 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 LAG3P18627 525 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 EIF2AK2P19525 551 aaKnown RBP8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 SARSP49591 514 aaKnown RBP8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 ANTXR2P58335 489 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 SMC1AQ14683 1233 aaKnown RBP8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 TSGA10IPQ3SY00 556 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 USH1GQ495M9 461 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 FAM102BQ5T8I3 360 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 ARHGEF16Q5VV41 709 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 TMC5Q6UXY8 1006 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 CYB5R4Q7L1T6 521 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 TMC7Q7Z402 723 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 GPR149Q86SP6 731 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 RSPH3Q86UC2 560 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 TCEANC2Q96MN5 208 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 NACAP1Q9BZK3 213 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 BCAS3Q9H6U6 928 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 MLXIPQ9HAP2 919 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 PXMP2Q9NR77 195 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 SPATA6Q9NWH7 488 aaPredicted RBP8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 PADI3Q9ULW8 664 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 PCDHB7Q9Y5E2 793 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 DMXL2Q8TDJ6 3036 aa8.08□□□□□ -1.12
PPP4R1-226ENST00000583903 FRMPD2Q68DX3 1309 aaPredicted RBP8.07□□□□□ -1.12
PPP4R1-226ENST00000583903 FNDC1Q4ZHG4 1894 aaPredicted RBP8.07□□□□□ -1.12
PPP4R1-226ENST00000583903 TM4SF5O14894 197 aa8.07□□□□□ -1.12
PPP4R1-226ENST00000583903 GDF9O60383 454 aa8.07□□□□□ -1.12
PPP4R1-226ENST00000583903 N4BP1O75113 896 aaKnown RBP8.07□□□□□ -1.12
PPP4R1-226ENST00000583903 CD2BP2O95400 341 aaKnown RBP8.07□□□□□ -1.12
PPP4R1-226ENST00000583903 EPCAMP16422 314 aa8.07□□□□□ -1.12
PPP4R1-226ENST00000583903 STARD6P59095 220 aa8.07□□□□□ -1.12
PPP4R1-226ENST00000583903 MRPS6P82932 125 aaKnown RBP8.07□□□□□ -1.12
PPP4R1-226ENST00000583903 NONOQ15233 471 aaKnown RBP eCLIP8.07□□□□□ -1.12
PPP4R1-226ENST00000583903 IMMTQ16891 758 aaKnown RBP8.07□□□□□ -1.12
PPP4R1-226ENST00000583903 DCLRE1AQ6PJP8 1040 aa8.07□□□□□ -1.12
PPP4R1-226ENST00000583903 KCNT2Q6UVM3 1135 aa8.07□□□□□ -1.12
PPP4R1-226ENST00000583903 TRIM50Q86XT4 487 aa8.07□□□□□ -1.12
PPP4R1-226ENST00000583903 MB21D2Q8IYB1 491 aaPredicted RBP8.07□□□□□ -1.12
PPP4R1-226ENST00000583903 SLC22A17Q8WUG5 538 aa8.07□□□□□ -1.12
PPP4R1-226ENST00000583903 DNAJB3Q8WWF6 145 aa8.07□□□□□ -1.12
PPP4R1-226ENST00000583903 TMEM121BQ9BXQ6 578 aaPredicted RBP8.07□□□□□ -1.12
PPP4R1-226ENST00000583903 TMX1Q9H3N1 280 aa8.07□□□□□ -1.12
PPP4R1-226ENST00000583903 SENP2Q9HC62 589 aa8.07□□□□□ -1.12
PPP4R1-226ENST00000583903 LAMA4Q16363 1823 aa8.07□□□□□ -1.12
PPP4R1-226ENST00000583903 LOC400499M0QZD8 3231 aa8.07□□□□□ -1.12
PPP4R1-226ENST00000583903 ITPR1Q14643 2758 aa8.07□□□□□ -1.12
PPP4R1-226ENST00000583903 MBLAC1A4D2B0 266 aaPredicted RBP8.06□□□□□ -1.12
PPP4R1-226ENST00000583903 TMEM8BA6NDV4 472 aa8.06□□□□□ -1.12
PPP4R1-226ENST00000583903 B4E1Z4 1266 aa8.06□□□□□ -1.12
PPP4R1-226ENST00000583903 NOP56O00567 594 aaKnown RBP8.06□□□□□ -1.12
PPP4R1-226ENST00000583903 RETP07949 1114 aa8.06□□□□□ -1.12
PPP4R1-226ENST00000583903 PPM1AP35813 382 aa8.06□□□□□ -1.12
PPP4R1-226ENST00000583903 EXOSC10Q01780 885 aaKnown RBP8.06□□□□□ -1.12
PPP4R1-226ENST00000583903 KRT17Q04695 432 aa8.06□□□□□ -1.12
PPP4R1-226ENST00000583903 CSRP2Q16527 193 aa8.06□□□□□ -1.12
PPP4R1-226ENST00000583903 LETM2Q2VYF4 491 aa8.06□□□□□ -1.12
PPP4R1-226ENST00000583903 LAIR1Q6GTX8 287 aa8.06□□□□□ -1.12
PPP4R1-226ENST00000583903 PRR23CQ6ZRP0 262 aa8.06□□□□□ -1.12
PPP4R1-226ENST00000583903 VSIG10LQ86VR7 867 aa8.06□□□□□ -1.12
PPP4R1-226ENST00000583903 MCF2L2Q86YR7 1114 aa8.06□□□□□ -1.12
PPP4R1-226ENST00000583903 GPKOWQ92917 476 aaPredicted RBP eCLIP8.06□□□□□ -1.126e-7■□□□□ 8.9
PPP4R1-226ENST00000583903 NXPE3Q969Y0 559 aa8.06□□□□□ -1.12
PPP4R1-226ENST00000583903 JAKMIP1Q96N16 626 aaKnown RBP8.06□□□□□ -1.12
PPP4R1-226ENST00000583903 PDCD2LQ9BRP1 358 aa8.06□□□□□ -1.12
PPP4R1-226ENST00000583903 BCO2Q9BYV7 579 aa8.06□□□□□ -1.12
PPP4R1-226ENST00000583903 ZSWIM6Q9HCJ5 1215 aa8.06□□□□□ -1.12
PPP4R1-226ENST00000583903 SLC2A4RGQ9NR83 387 aa8.06□□□□□ -1.12
PPP4R1-226ENST00000583903 SEMA4GQ9NTN9 838 aa8.06□□□□□ -1.12
PPP4R1-226ENST00000583903 ZNF215Q9UL58 517 aaPredicted RBP8.06□□□□□ -1.12
PPP4R1-226ENST00000583903 IGSF10Q6WRI0 2623 aa8.06□□□□□ -1.12
PPP4R1-226ENST00000583903 ABCB11O95342 1321 aa8.05□□□□□ -1.12
PPP4R1-226ENST00000583903 IGSF9BQ9UPX0 1349 aa8.05□□□□□ -1.12
PPP4R1-226ENST00000583903 TSPY2A6NKD2 308 aa8.05□□□□□ -1.12
PPP4R1-226ENST00000583903 CYSRT1A8MQ03 144 aa8.05□□□□□ -1.12
PPP4R1-226ENST00000583903 ORC4O43929 436 aa8.05□□□□□ -1.12
PPP4R1-226ENST00000583903 MGEA5O60502 916 aa8.05□□□□□ -1.12
PPP4R1-226ENST00000583903 CXCL14O95715 111 aa8.05□□□□□ -1.12
PPP4R1-226ENST00000583903 SLC3A2P08195 630 aaKnown RBP8.05□□□□□ -1.12
PPP4R1-226ENST00000583903 PDHBP11177 359 aa8.05□□□□□ -1.12
PPP4R1-226ENST00000583903 MYCLP12524 364 aaPredicted RBP8.05□□□□□ -1.12
PPP4R1-226ENST00000583903 IBSPP21815 317 aaPredicted RBP8.05□□□□□ -1.12
PPP4R1-226ENST00000583903 PBX3P40426 434 aa8.05□□□□□ -1.12
PPP4R1-226ENST00000583903 LIMK1P53667 647 aa8.05□□□□□ -1.12
PPP4R1-226ENST00000583903 ANAPC15P60006 121 aa8.05□□□□□ -1.12
PPP4R1-226ENST00000583903 ZNF543Q08ER8 600 aa8.05□□□□□ -1.12
PPP4R1-226ENST00000583903 PAK2Q13177 524 aa8.05□□□□□ -1.12
PPP4R1-226ENST00000583903 PTPN14Q15678 1187 aa8.05□□□□□ -1.12
PPP4R1-226ENST00000583903 SOWAHCQ53LP3 525 aaPredicted RBP8.05□□□□□ -1.12
PPP4R1-226ENST00000583903 RRP12Q5JTH9 1297 aaKnown RBP8.05□□□□□ -1.12
PPP4R1-226ENST00000583903 MARCH8Q5T0T0 291 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms