RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 DDX25Q9UHL0 483 aaKnown RBP25.19■■□□□ 1.62
CASC3-207ENST00000581849 ST3GAL5Q9UNP4 418 aa25.19■■□□□ 1.62
CASC3-207ENST00000581849 KCNJ14Q9UNX9 436 aa25.19■■□□□ 1.62
CASC3-207ENST00000581849 MUC3AQ02505 3323 aa25.19■■□□□ 1.62
CASC3-207ENST00000581849 TCF20Q9UGU0 1960 aaKnown RBP25.18■■□□□ 1.62
CASC3-207ENST00000581849 CCDC194A0A1B0GVG4 234 aa25.18■■□□□ 1.62
CASC3-207ENST00000581849 CHMP2AO43633 222 aa25.18■■□□□ 1.62
CASC3-207ENST00000581849 KIZQ2M2Z5 673 aa25.18■■□□□ 1.62
CASC3-207ENST00000581849 NAALADL2Q58DX5 795 aa25.18■■□□□ 1.62
CASC3-207ENST00000581849 PPP4R3AQ6IN85 833 aa25.18■■□□□ 1.62
CASC3-207ENST00000581849 P2RX5Q93086 422 aa25.18■■□□□ 1.62
CASC3-207ENST00000581849 NSUN3Q9H649 340 aaKnown RBP25.18■■□□□ 1.62
CASC3-207ENST00000581849 RGS18Q9NS28 235 aa25.18■■□□□ 1.62
CASC3-207ENST00000581849 TARBP2Q15633 366 aaKnown RBP25.17■■□□□ 1.62
CASC3-207ENST00000581849 UGCGQ16739 394 aa25.17■■□□□ 1.62
CASC3-207ENST00000581849 INF2Q27J81 1249 aa25.17■■□□□ 1.62
CASC3-207ENST00000581849 EFCAB12Q6NXP0 572 aa25.17■■□□□ 1.62
CASC3-207ENST00000581849 SLC24A5Q71RS6 500 aa25.17■■□□□ 1.62
CASC3-207ENST00000581849 NEK8Q86SG6 692 aa25.17■■□□□ 1.62
CASC3-207ENST00000581849 FAM20AQ96MK3 541 aa25.17■■□□□ 1.62
CASC3-207ENST00000581849 OSMRQ99650 979 aa25.17■■□□□ 1.62
CASC3-207ENST00000581849 NIFKQ9BYG3 293 aaKnown RBP25.17■■□□□ 1.62
CASC3-207ENST00000581849 LRFN2Q9ULH4 789 aa25.17■■□□□ 1.62
CASC3-207ENST00000581849 CTDNEP1O95476 244 aa25.16■■□□□ 1.62
CASC3-207ENST00000581849 VTNP04004 478 aa25.16■■□□□ 1.62
CASC3-207ENST00000581849 CLCN3P51790 818 aa25.16■■□□□ 1.62
CASC3-207ENST00000581849 COL19A1Q14993 1142 aa25.16■■□□□ 1.62
CASC3-207ENST00000581849 LEXMQ3ZCV2 418 aa25.16■■□□□ 1.62
CASC3-207ENST00000581849 XKR3Q5GH77 459 aa25.16■■□□□ 1.62
CASC3-207ENST00000581849 TRMT1LQ7Z2T5 733 aaKnown RBP25.16■■□□□ 1.62
CASC3-207ENST00000581849 FAM228AQ86W67 206 aa25.16■■□□□ 1.62
CASC3-207ENST00000581849 ADAM2Q99965 735 aa25.16■■□□□ 1.62
CASC3-207ENST00000581849 KCNMB3Q9NPA1 279 aa25.16■■□□□ 1.62
CASC3-207ENST00000581849 ORC3Q9UBD5 711 aaPredicted RBP25.16■■□□□ 1.62
CASC3-207ENST00000581849 PCDHB7Q9Y5E2 793 aa25.16■■□□□ 1.62
CASC3-207ENST00000581849 BDP1A6H8Y1 2624 aa25.15■■□□□ 1.62
CASC3-207ENST00000581849 DENND3A2RUS2 1198 aa25.15■■□□□ 1.62
CASC3-207ENST00000581849 C9IYK1 514 aa25.15■■□□□ 1.62
CASC3-207ENST00000581849 TBX3O15119 743 aa25.15■■□□□ 1.62
CASC3-207ENST00000581849 NCK2O43639 380 aa25.15■■□□□ 1.62
CASC3-207ENST00000581849 MGEA5O60502 916 aa25.15■■□□□ 1.62
CASC3-207ENST00000581849 CDC42EP1Q00587 391 aa25.15■■□□□ 1.62
CASC3-207ENST00000581849 TBC1D8BQ0IIM8 1120 aa25.15■■□□□ 1.62
CASC3-207ENST00000581849 LETM2Q2VYF4 491 aa25.15■■□□□ 1.62
CASC3-207ENST00000581849 GTF3C6Q969F1 213 aa25.15■■□□□ 1.62
CASC3-207ENST00000581849 GJA10Q969M2 543 aa25.15■■□□□ 1.62
CASC3-207ENST00000581849 ADAMTS10Q9H324 1103 aa25.15■■□□□ 1.62
CASC3-207ENST00000581849 ELAC1Q9H777 363 aaKnown RBP25.15■■□□□ 1.62
CASC3-207ENST00000581849 AKT3Q9Y243 479 aa25.15■■□□□ 1.62
CASC3-207ENST00000581849 MRPL42Q9Y6G3 142 aaKnown RBP25.15■■□□□ 1.62
CASC3-207ENST00000581849 MMP1P03956 469 aa25.14■■□□□ 1.62
CASC3-207ENST00000581849 EIF4BP23588 611 aaKnown RBP25.14■■□□□ 1.62
CASC3-207ENST00000581849 NLRP11P59045 1033 aaKnown RBP25.14■■□□□ 1.62
CASC3-207ENST00000581849 FAM189BP81408 668 aa25.14■■□□□ 1.62
CASC3-207ENST00000581849 PPP2R5CQ13362 524 aa25.14■■□□□ 1.62
CASC3-207ENST00000581849 KIAA1671Q9BY89 1806 aa25.14■■□□□ 1.61
CASC3-207ENST00000581849 GRM6O15303 877 aa25.13■■□□□ 1.61
CASC3-207ENST00000581849 SLC37A4O43826 429 aa25.13■■□□□ 1.61
CASC3-207ENST00000581849 DKC1O60832 514 aaKnown RBP eCLIP25.13■■□□□ 1.61
CASC3-207ENST00000581849 STBD1O95210 358 aa25.13■■□□□ 1.61
CASC3-207ENST00000581849 CENPBP07199 599 aaPredicted RBP25.13■■□□□ 1.61
CASC3-207ENST00000581849 DSC3Q14574 896 aa25.13■■□□□ 1.61
CASC3-207ENST00000581849 ME3Q16798 604 aa25.13■■□□□ 1.61
CASC3-207ENST00000581849 PUS10Q3MIT2 529 aaKnown RBP25.13■■□□□ 1.61
CASC3-207ENST00000581849 TCEAL5Q5H9L2 206 aa25.13■■□□□ 1.61
CASC3-207ENST00000581849 LRRC71Q8N4P6 559 aa25.13■■□□□ 1.61
CASC3-207ENST00000581849 PABPC5Q96DU9 382 aaKnown RBP25.13■■□□□ 1.61
CASC3-207ENST00000581849 BRMS1Q9HCU9 246 aa25.13■■□□□ 1.61
CASC3-207ENST00000581849 TMEM161AQ9NX61 479 aa25.13■■□□□ 1.61
CASC3-207ENST00000581849 SEPT9Q9UHD8 586 aaPredicted RBP25.13■■□□□ 1.61
CASC3-207ENST00000581849 FNDC1Q4ZHG4 1894 aaPredicted RBP25.13■■□□□ 1.61
CASC3-207ENST00000581849 ATG2AQ2TAZ0 1938 aa25.12■■□□□ 1.61
CASC3-207ENST00000581849 IGKV6-21A0A0C4DH24 114 aa25.12■■□□□ 1.61
CASC3-207ENST00000581849 FDPSP14324 419 aaKnown RBP25.12■■□□□ 1.61
CASC3-207ENST00000581849 GPC3P51654 580 aa25.12■■□□□ 1.61
CASC3-207ENST00000581849 PSMC5P62195 406 aa25.12■■□□□ 1.61
CASC3-207ENST00000581849 NEK9Q8TD19 979 aa25.12■■□□□ 1.61
CASC3-207ENST00000581849 CEP89Q96ST8 783 aa25.12■■□□□ 1.61
CASC3-207ENST00000581849 PPP1R16BQ96T49 567 aa25.12■■□□□ 1.61
CASC3-207ENST00000581849 VAV3Q9UKW4 847 aa25.12■■□□□ 1.61
CASC3-207ENST00000581849 PLAGL2Q9UPG8 496 aa25.12■■□□□ 1.61
CASC3-207ENST00000581849 MYO7AQ13402 2215 aa25.11■■□□□ 1.61
CASC3-207ENST00000581849 KCNA5P22460 613 aa25.11■■□□□ 1.61
CASC3-207ENST00000581849 PIK3AP1Q6ZUJ8 805 aa25.11■■□□□ 1.61
CASC3-207ENST00000581849 OXER1Q8TDS5 423 aa25.11■■□□□ 1.61
CASC3-207ENST00000581849 NECAB3Q96P71 396 aaPredicted RBP25.11■■□□□ 1.61
CASC3-207ENST00000581849 JPH2Q9BR39 696 aaPredicted RBP25.11■■□□□ 1.61
CASC3-207ENST00000581849 PPME1Q9Y570 386 aa25.11■■□□□ 1.61
CASC3-207ENST00000581849 HOXA2O43364 376 aa25.1■■□□□ 1.61
CASC3-207ENST00000581849 DARSP14868 501 aaKnown RBP25.1■■□□□ 1.61
CASC3-207ENST00000581849 KRT2P35908 639 aa25.1■■□□□ 1.61
CASC3-207ENST00000581849 DNM2P50570 870 aa25.1■■□□□ 1.61
CASC3-207ENST00000581849 NEK4P51957 841 aa25.1■■□□□ 1.61
CASC3-207ENST00000581849 MTERF2Q49AM1 385 aa25.1■■□□□ 1.61
CASC3-207ENST00000581849 PAN2Q504Q3 1202 aaKnown RBP25.1■■□□□ 1.61
CASC3-207ENST00000581849 ATP6V0A4Q9HBG4 840 aa25.1■■□□□ 1.61
CASC3-207ENST00000581849 GJB4Q9NTQ9 266 aa25.1■■□□□ 1.61
CASC3-207ENST00000581849 CCNT1O60563 726 aaKnown RBP25.09■■□□□ 1.61
CASC3-207ENST00000581849 ZSCAN20P17040 1043 aaPredicted RBP25.09■■□□□ 1.61
CASC3-207ENST00000581849 QARSP47897 775 aaKnown RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms