RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 C2orf71A6NGG8 1288 aa8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 SPATA31C2B4DYI2 1134 aa8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 PPP1R3GB7ZBB8 358 aa8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 DCNP07585 359 aaKnown RBP8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 CFHP08603 1231 aa8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 GLULP15104 373 aa8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 PBX3P40426 434 aa8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 TBC1D8BQ0IIM8 1120 aa8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 PPFIA1Q13136 1202 aa8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 GRIK4Q16099 956 aa8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 TMEM266Q2M3C6 531 aa8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 SPECC1Q5M775 1068 aa8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 RSPH3Q86UC2 560 aa8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 MRPL43Q8N983 215 aaKnown RBP8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 CHAMP1Q96JM3 812 aa8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 RTKNQ9BST9 563 aa8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 LRRCC1Q9C099 1032 aa8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 FAM49AQ9H0Q0 323 aaPredicted RBP8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 TOMM22Q9NS69 142 aa8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 WNT16Q9UBV4 365 aa8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 PCDHB7Q9Y5E2 793 aa8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 TRPV2Q9Y5S1 764 aa8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 MIA3Q5JRA6 1907 aa8.91□□□□□ -0.98
SMARCE1-217ENST00000580654 GCN1Q92616 2671 aaKnown RBP8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 FRYQ5TBA9 3013 aa8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 LAMA4Q16363 1823 aa8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 C9IYK1 514 aa8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 N4BP1O75113 896 aaKnown RBP8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 FGFR1P11362 822 aa8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 EPCAMP16422 314 aa8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 LAG3P18627 525 aa8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 PDE4AP27815 886 aa8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 CCND2P30279 289 aa8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 SP4Q02446 784 aa8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 PAK2Q13177 524 aa8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 COL9A3Q14050 684 aaPredicted RBP8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 NEDD9Q14511 834 aa8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 ATAT1Q5SQI0 421 aa8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 TMC7Q7Z402 723 aa8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 C1orf210Q8IVY1 113 aa8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 RSAD2Q8WXG1 361 aa8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 INPP4AQ96PE3 977 aaPredicted RBP8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 ZKSCAN3Q9BRR0 538 aa8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 TBC1D17Q9HA65 648 aa8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 VAT1LQ9HCJ6 419 aa8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 SH2B1Q9NRF2 756 aaPredicted RBP8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 ZBTB40Q9NUA8 1239 aa8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 RNF19AQ9NV58 838 aa8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 NCDNQ9UBB6 729 aa8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 CDV3Q9UKY7 258 aaKnown RBP8.9□□□□□ -0.98
SMARCE1-217ENST00000580654 ASH1LQ9NR48 2969 aaKnown RBP8.9□□□□□ -0.99
SMARCE1-217ENST00000580654 CEP295Q9C0D2 2601 aa8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 FRMPD4Q14CM0 1322 aa8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 GSTTP1A0A1W2PQM5 241 aa8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 PRR5-ARHGAP8B1AHC4 643 aa8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 KINO60870 393 aaKnown RBP8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 LRRN2O75325 713 aa8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 MARK3P27448 753 aa8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 TCF7P36402 384 aaPredicted RBP8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 ARHGAP8P85298 464 aa8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 SMC1AQ14683 1233 aaKnown RBP8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 ALX1Q15699 326 aa8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 IER5Q5VY09 327 aa8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 ZNF787Q6DD87 383 aa8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 XRRA1Q6P2D8 792 aa8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 KCNT2Q6UVM3 1135 aa8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 TMC5Q6UXY8 1006 aa8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 SLC22A17Q8WUG5 538 aa8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 MTMR8Q96EF0 704 aa8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 AMNQ9BXJ7 453 aa8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 CELF4Q9BZC1 486 aaKnown RBP8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 PARD6AQ9NPB6 346 aa8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 RGS18Q9NS28 235 aa8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 MAP3K20Q9NYL2 800 aaKnown RBP8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 RTEL1Q9NZ71 1219 aa8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 PUF60Q9UHX1 559 aaKnown RBP8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 CA14Q9ULX7 337 aa8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 MAST4O15021 2626 aa8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 DOCK8Q8NF50 2099 aa8.89□□□□□ -0.99
SMARCE1-217ENST00000580654 KDM3AQ9Y4C1 1321 aa8.88□□□□□ -0.99
SMARCE1-217ENST00000580654 FGAP02671 866 aa8.88□□□□□ -0.99
SMARCE1-217ENST00000580654 IGBP1P78318 339 aa8.88□□□□□ -0.99
SMARCE1-217ENST00000580654 FAM189BP81408 668 aa8.88□□□□□ -0.99
SMARCE1-217ENST00000580654 LMNB2Q03252 620 aa8.88□□□□□ -0.99
SMARCE1-217ENST00000580654 NFX1Q12986 1120 aaKnown RBP8.88□□□□□ -0.99
SMARCE1-217ENST00000580654 PPM1JQ5JR12 505 aa8.88□□□□□ -0.99
SMARCE1-217ENST00000580654 PHLDB3Q6NSJ2 640 aa8.88□□□□□ -0.99
SMARCE1-217ENST00000580654 GPR149Q86SP6 731 aa8.88□□□□□ -0.99
SMARCE1-217ENST00000580654 FCHSD1Q86WN1 690 aa8.88□□□□□ -0.99
SMARCE1-217ENST00000580654 TBC1D10CQ8IV04 446 aa8.88□□□□□ -0.99
SMARCE1-217ENST00000580654 SLC39A11Q8N1S5 342 aa8.88□□□□□ -0.99
SMARCE1-217ENST00000580654 GPR161Q8N6U8 529 aaKnown RBP8.88□□□□□ -0.99
SMARCE1-217ENST00000580654 PNMA1Q8ND90 353 aa8.88□□□□□ -0.99
SMARCE1-217ENST00000580654 PI4K2BQ8TCG2 481 aa8.88□□□□□ -0.99
SMARCE1-217ENST00000580654 TMEM40Q8WWA1 233 aa8.88□□□□□ -0.99
SMARCE1-217ENST00000580654 ACSF2Q96CM8 615 aaPredicted RBP8.88□□□□□ -0.99
SMARCE1-217ENST00000580654 CASD1Q96PB1 797 aa8.88□□□□□ -0.99
SMARCE1-217ENST00000580654 ADAM2Q99965 735 aa8.88□□□□□ -0.99
SMARCE1-217ENST00000580654 CDHR5Q9HBB8 845 aa8.88□□□□□ -0.99
SMARCE1-217ENST00000580654 DZANK1Q9NVP4 752 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms