RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 C8orf76Q96K31 380 aa22.6■■□□□ 1.21
SMG8-204ENST00000580498 OSMRQ99650 979 aa22.6■■□□□ 1.21
SMG8-204ENST00000580498 NIFKQ9BYG3 293 aaKnown RBP22.6■■□□□ 1.21
SMG8-204ENST00000580498 KCNMB3Q9NPA1 279 aa22.6■■□□□ 1.21
SMG8-204ENST00000580498 GJB4Q9NTQ9 266 aa22.6■■□□□ 1.21
SMG8-204ENST00000580498 COG5Q9UP83 839 aa22.6■■□□□ 1.21
SMG8-204ENST00000580498 PPME1Q9Y570 386 aa22.6■■□□□ 1.21
SMG8-204ENST00000580498 PCDHB7Q9Y5E2 793 aa22.6■■□□□ 1.21
SMG8-204ENST00000580498 TTC3P53804 2025 aa22.59■■□□□ 1.21
SMG8-204ENST00000580498 EPOPA6NHQ4 379 aa22.59■■□□□ 1.21
SMG8-204ENST00000580498 JAK2O60674 1132 aa22.59■■□□□ 1.21
SMG8-204ENST00000580498 RB1P06400 928 aa22.59■■□□□ 1.21
SMG8-204ENST00000580498 ZSCAN20P17040 1043 aaPredicted RBP22.59■■□□□ 1.21
SMG8-204ENST00000580498 CTNNB1P35222 781 aa22.59■■□□□ 1.21
SMG8-204ENST00000580498 NLRP11P59045 1033 aaKnown RBP22.59■■□□□ 1.21
SMG8-204ENST00000580498 NR5A1Q13285 461 aa22.59■■□□□ 1.21
SMG8-204ENST00000580498 RABEP1Q15276 862 aa22.59■■□□□ 1.21
SMG8-204ENST00000580498 TMEM266Q2M3C6 531 aa22.59■■□□□ 1.21
SMG8-204ENST00000580498 EPC2Q52LR7 807 aa22.59■■□□□ 1.21
SMG8-204ENST00000580498 OTUD6AQ7L8S5 288 aa22.59■■□□□ 1.21
SMG8-204ENST00000580498 BANK1Q8NDB2 785 aa22.59■■□□□ 1.21
SMG8-204ENST00000580498 NLRP7Q8WX94 980 aa22.59■■□□□ 1.21
SMG8-204ENST00000580498 PPP1R16BQ96T49 567 aa22.59■■□□□ 1.21
SMG8-204ENST00000580498 C17orf80Q9BSJ5 609 aa22.59■■□□□ 1.21
SMG8-204ENST00000580498 C11orf84Q9BUA3 381 aaPredicted RBP22.59■■□□□ 1.21
SMG8-204ENST00000580498 ERVK-5Q9HDB9 667 aa22.59■■□□□ 1.21
SMG8-204ENST00000580498 COL4A4P53420 1690 aaPredicted RBP22.58■■□□□ 1.21
SMG8-204ENST00000580498 CDH23Q9H251 3354 aa22.58■■□□□ 1.21
SMG8-204ENST00000580498 RALGAPA2Q2PPJ7 1873 aa22.58■■□□□ 1.21
SMG8-204ENST00000580498 IBSPP21815 317 aaPredicted RBP22.58■■□□□ 1.21
SMG8-204ENST00000580498 SARSP49591 514 aaKnown RBP22.58■■□□□ 1.21
SMG8-204ENST00000580498 GPM6BQ13491 265 aa22.58■■□□□ 1.21
SMG8-204ENST00000580498 CALCRLQ16602 461 aa22.58■■□□□ 1.21
SMG8-204ENST00000580498 UGCGQ16739 394 aa22.58■■□□□ 1.21
SMG8-204ENST00000580498 TIGD5Q53EQ6 642 aa22.58■■□□□ 1.21
SMG8-204ENST00000580498 NCAPH2Q6IBW4 605 aa22.58■■□□□ 1.21
SMG8-204ENST00000580498 CMTR2Q8IYT2 770 aaKnown RBP22.58■■□□□ 1.21
SMG8-204ENST00000580498 LRRC71Q8N4P6 559 aa22.58■■□□□ 1.21
SMG8-204ENST00000580498 SLC7A3Q8WY07 619 aa22.58■■□□□ 1.21
SMG8-204ENST00000580498 CCDC43Q96MW1 224 aaKnown RBP22.58■■□□□ 1.21
SMG8-204ENST00000580498 INO80BQ9C086 356 aaPredicted RBP22.58■■□□□ 1.21
SMG8-204ENST00000580498 ST3GAL5Q9UNP4 418 aa22.58■■□□□ 1.21
SMG8-204ENST00000580498 NOC2LQ9Y3T9 749 aaKnown RBP22.58■■□□□ 1.21
SMG8-204ENST00000580498 CHD9Q3L8U1 2897 aa22.57■■□□□ 1.2
SMG8-204ENST00000580498 PRRC2BQ5JSZ5 2229 aaKnown RBP22.57■■□□□ 1.2
SMG8-204ENST00000580498 BTBD18B2RXH4 712 aa22.57■■□□□ 1.2
SMG8-204ENST00000580498 NEMFO60524 1076 aa22.57■■□□□ 1.2
SMG8-204ENST00000580498 EIF4BP23588 611 aaKnown RBP22.57■■□□□ 1.2
SMG8-204ENST00000580498 EPHA7Q15375 998 aa22.57■■□□□ 1.2
SMG8-204ENST00000580498 B3GNT9Q6UX72 402 aa22.57■■□□□ 1.2
SMG8-204ENST00000580498 SLC24A5Q71RS6 500 aa22.57■■□□□ 1.2
SMG8-204ENST00000580498 POTEDQ86YR6 584 aa22.57■■□□□ 1.2
SMG8-204ENST00000580498 ADAM2Q99965 735 aa22.57■■□□□ 1.2
SMG8-204ENST00000580498 GCOM2Q9BZD3 368 aaPredicted RBP22.57■■□□□ 1.2
SMG8-204ENST00000580498 PCDHA12Q9UN75 941 aa22.57■■□□□ 1.2
SMG8-204ENST00000580498 NLRC5Q86WI3 1866 aa22.56■■□□□ 1.2
SMG8-204ENST00000580498 H3BNC9 293 aa22.56■■□□□ 1.2
SMG8-204ENST00000580498 HOXA2O43364 376 aa22.56■■□□□ 1.2
SMG8-204ENST00000580498 GPR32O75388 356 aa22.56■■□□□ 1.2
SMG8-204ENST00000580498 DGKIO75912 1065 aa22.56■■□□□ 1.2
SMG8-204ENST00000580498 NEK9Q8TD19 979 aa22.56■■□□□ 1.2
SMG8-204ENST00000580498 HLA-CQ95604 372 aa22.56■■□□□ 1.2
SMG8-204ENST00000580498 MRPL38Q96DV4 380 aaKnown RBP22.56■■□□□ 1.2
SMG8-204ENST00000580498 PLVAPQ9BX97 442 aa22.56■■□□□ 1.2
SMG8-204ENST00000580498 ZSWIM4Q9H7M6 989 aa22.56■■□□□ 1.2
SMG8-204ENST00000580498 AAASQ9NRG9 546 aa22.56■■□□□ 1.2
SMG8-204ENST00000580498 VAV3Q9UKW4 847 aa22.56■■□□□ 1.2
SMG8-204ENST00000580498 GAS2O43903 313 aaKnown RBP22.55■■□□□ 1.2
SMG8-204ENST00000580498 LPXNO60711 386 aa22.55■■□□□ 1.2
SMG8-204ENST00000580498 RBM25P49756 843 aaKnown RBP22.55■■□□□ 1.2
SMG8-204ENST00000580498 POLGP54098 1239 aaPredicted RBP22.55■■□□□ 1.2
SMG8-204ENST00000580498 SPOUT1Q5T280 376 aaKnown RBP22.55■■□□□ 1.2
SMG8-204ENST00000580498 CEP170P1Q96L14 293 aa22.55■■□□□ 1.2
SMG8-204ENST00000580498 ASB2Q96Q27 587 aa22.55■■□□□ 1.2
SMG8-204ENST00000580498 COL25A1Q9BXS0 654 aaPredicted RBP22.55■■□□□ 1.2
SMG8-204ENST00000580498 LMAN2LQ9H0V9 348 aa22.55■■□□□ 1.2
SMG8-204ENST00000580498 ATP6V0A4Q9HBG4 840 aa22.55■■□□□ 1.2
SMG8-204ENST00000580498 RGS18Q9NS28 235 aa22.55■■□□□ 1.2
SMG8-204ENST00000580498 DTNBO60941 627 aa22.54■■□□□ 1.2
SMG8-204ENST00000580498 SFPQP23246 707 aaKnown RBP eCLIP22.54■■□□□ 1.2
SMG8-204ENST00000580498 BMPR1AP36894 532 aa22.54■■□□□ 1.2
SMG8-204ENST00000580498 RFC5P40937 340 aa22.54■■□□□ 1.2
SMG8-204ENST00000580498 GPC3P51654 580 aa22.54■■□□□ 1.2
SMG8-204ENST00000580498 TARBP2Q15633 366 aaKnown RBP22.54■■□□□ 1.2
SMG8-204ENST00000580498 ZNF410Q86VK4 478 aa22.54■■□□□ 1.2
SMG8-204ENST00000580498 FAM228AQ86W67 206 aa22.54■■□□□ 1.2
SMG8-204ENST00000580498 C4orf19Q8IY42 314 aa22.54■■□□□ 1.2
SMG8-204ENST00000580498 LINC01599Q8WXQ3 324 aa22.54■■□□□ 1.2
SMG8-204ENST00000580498 TNFRSF25Q93038 417 aa22.54■■□□□ 1.2
SMG8-204ENST00000580498 PPP2R3CQ969Q6 453 aa22.54■■□□□ 1.2
SMG8-204ENST00000580498 ZNF689Q96CS4 500 aaPredicted RBP22.54■■□□□ 1.2
SMG8-204ENST00000580498 LXNQ9BS40 222 aa22.54■■□□□ 1.2
SMG8-204ENST00000580498 TMX1Q9H3N1 280 aa22.54■■□□□ 1.2
SMG8-204ENST00000580498 CDHR5Q9HBB8 845 aa22.54■■□□□ 1.2
SMG8-204ENST00000580498 CYP26B1Q9NR63 512 aa22.54■■□□□ 1.2
SMG8-204ENST00000580498 DACT1Q9NYF0 836 aa22.54■■□□□ 1.2
SMG8-204ENST00000580498 NOL7Q9UMY1 257 aaKnown RBP22.54■■□□□ 1.2
SMG8-204ENST00000580498 MAFO75444 373 aaPredicted RBP22.53■■□□□ 1.2
SMG8-204ENST00000580498 ORC2Q13416 577 aaPredicted RBP22.53■■□□□ 1.2
SMG8-204ENST00000580498 NAALADL2Q58DX5 795 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms