RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 PUF60Q9UHX1 559 aaKnown RBP10.65□□□□□ -0.7
SMARCD2-208ENST00000580054 DBR1Q9UK59 544 aaKnown RBP10.65□□□□□ -0.7
SMARCD2-208ENST00000580054 ST3GAL5Q9UNP4 418 aa10.65□□□□□ -0.7
SMARCD2-208ENST00000580054 USP24Q9UPU5 2620 aa10.65□□□□□ -0.71
SMARCD2-208ENST00000580054 SMIM35A0A1B0GVV1 85 aa10.64□□□□□ -0.71
SMARCD2-208ENST00000580054 HIP1O00291 1037 aa10.64□□□□□ -0.71
SMARCD2-208ENST00000580054 MEIS2O14770 477 aa10.64□□□□□ -0.71
SMARCD2-208ENST00000580054 NARSO43776 548 aaKnown RBP10.64□□□□□ -0.71
SMARCD2-208ENST00000580054 EOMESO95936 686 aa10.64□□□□□ -0.71
SMARCD2-208ENST00000580054 EPCAMP16422 314 aa10.64□□□□□ -0.71
SMARCD2-208ENST00000580054 SMC1AQ14683 1233 aaKnown RBP10.64□□□□□ -0.71
SMARCD2-208ENST00000580054 MTHFD1LQ6UB35 978 aa10.64□□□□□ -0.71
SMARCD2-208ENST00000580054 FAM228AQ86W67 206 aa10.64□□□□□ -0.71
SMARCD2-208ENST00000580054 CHD1LQ86WJ1 897 aa10.64□□□□□ -0.71
SMARCD2-208ENST00000580054 SMC5Q8IY18 1101 aa10.64□□□□□ -0.71
SMARCD2-208ENST00000580054 MRPL43Q8N983 215 aaKnown RBP10.64□□□□□ -0.71
SMARCD2-208ENST00000580054 AUTS2Q8WXX7 1259 aa10.64□□□□□ -0.71
SMARCD2-208ENST00000580054 ZNF558Q96NG5 402 aa10.64□□□□□ -0.71
SMARCD2-208ENST00000580054 CASD1Q96PB1 797 aa10.64□□□□□ -0.71
SMARCD2-208ENST00000580054 RTP3Q9BQQ7 232 aa10.64□□□□□ -0.71
SMARCD2-208ENST00000580054 OSBPL3Q9H4L5 887 aa10.64□□□□□ -0.71
SMARCD2-208ENST00000580054 CYP26B1Q9NR63 512 aa10.64□□□□□ -0.71
SMARCD2-208ENST00000580054 TMEM161AQ9NX61 479 aa10.64□□□□□ -0.71
SMARCD2-208ENST00000580054 FBXL21Q9UKT6 434 aa10.64□□□□□ -0.71
SMARCD2-208ENST00000580054 DUSP12Q9UNI6 340 aa10.64□□□□□ -0.71
SMARCD2-208ENST00000580054 MIA3Q5JRA6 1907 aa10.64□□□□□ -0.71
SMARCD2-208ENST00000580054 MYH9P35579 1960 aaKnown RBP10.63□□□□□ -0.71
SMARCD2-208ENST00000580054 BAHCC1Q9P281 2608 aa10.63□□□□□ -0.71
SMARCD2-208ENST00000580054 WDR81Q562E7 1941 aa10.63□□□□□ -0.71
SMARCD2-208ENST00000580054 CHD6Q8TD26 2715 aa10.63□□□□□ -0.71
SMARCD2-208ENST00000580054 TRAF1Q13077 416 aa10.63□□□□□ -0.71
SMARCD2-208ENST00000580054 MTMR1Q13613 665 aa10.63□□□□□ -0.71
SMARCD2-208ENST00000580054 RSPO4Q2I0M5 234 aaPredicted RBP10.63□□□□□ -0.71
SMARCD2-208ENST00000580054 XRRA1Q6P2D8 792 aa10.63□□□□□ -0.71
SMARCD2-208ENST00000580054 TMC5Q6UXY8 1006 aa10.63□□□□□ -0.71
SMARCD2-208ENST00000580054 SLC39A11Q8N1S5 342 aa10.63□□□□□ -0.71
SMARCD2-208ENST00000580054 LRRC43Q8N309 656 aa10.63□□□□□ -0.71
SMARCD2-208ENST00000580054 OSMRQ99650 979 aa10.63□□□□□ -0.71
SMARCD2-208ENST00000580054 TMEM117Q9H0C3 514 aa10.63□□□□□ -0.71
SMARCD2-208ENST00000580054 JPH1Q9HDC5 661 aaPredicted RBP10.63□□□□□ -0.71
SMARCD2-208ENST00000580054 USTQ9Y2C2 406 aa10.63□□□□□ -0.71
SMARCD2-208ENST00000580054 UBIAD1Q9Y5Z9 338 aa10.63□□□□□ -0.71
SMARCD2-208ENST00000580054 COL4A3Q01955 1670 aa10.63□□□□□ -0.71
SMARCD2-208ENST00000580054 KRBA1A5PL33 1030 aa10.62□□□□□ -0.71
SMARCD2-208ENST00000580054 NT5C1B-RDH14C9J2C7 533 aa10.62□□□□□ -0.71
SMARCD2-208ENST00000580054 CFHP08603 1231 aa10.62□□□□□ -0.71
SMARCD2-208ENST00000580054 PPM1AP35813 382 aa10.62□□□□□ -0.71
SMARCD2-208ENST00000580054 METAP2P50579 478 aaKnown RBP eCLIP10.62□□□□□ -0.71
SMARCD2-208ENST00000580054 FAM189BP81408 668 aa10.62□□□□□ -0.71
SMARCD2-208ENST00000580054 NUCB1Q02818 461 aa10.62□□□□□ -0.71
SMARCD2-208ENST00000580054 KRT17Q04695 432 aa10.62□□□□□ -0.71
SMARCD2-208ENST00000580054 TDGQ13569 410 aa10.62□□□□□ -0.71
SMARCD2-208ENST00000580054 DSC3Q14574 896 aa10.62□□□□□ -0.71
SMARCD2-208ENST00000580054 UBE2SQ16763 222 aa10.62□□□□□ -0.71
SMARCD2-208ENST00000580054 CLLU1OSQ5K130 101 aa10.62□□□□□ -0.71
SMARCD2-208ENST00000580054 ATAT1Q5SQI0 421 aa10.62□□□□□ -0.71
SMARCD2-208ENST00000580054 TMEM173Q86WV6 379 aaPredicted RBP10.62□□□□□ -0.71
SMARCD2-208ENST00000580054 KIAA0319LQ8IZA0 1049 aa10.62□□□□□ -0.71
SMARCD2-208ENST00000580054 PLCD3Q8N3E9 789 aa10.62□□□□□ -0.71
SMARCD2-208ENST00000580054 CUL5Q93034 780 aa10.62□□□□□ -0.71
SMARCD2-208ENST00000580054 SEMA4AQ9H3S1 761 aa10.62□□□□□ -0.71
SMARCD2-208ENST00000580054 AZI2Q9H6S1 392 aa10.62□□□□□ -0.71
SMARCD2-208ENST00000580054 KCNK12Q9HB15 430 aa10.62□□□□□ -0.71
SMARCD2-208ENST00000580054 SPG21Q9NZD8 308 aa10.62□□□□□ -0.71
SMARCD2-208ENST00000580054 PATJQ8NI35 1801 aa10.62□□□□□ -0.71
SMARCD2-208ENST00000580054 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.61□□□□□ -0.71
SMARCD2-208ENST00000580054 PIK3CDO00329 1044 aa10.61□□□□□ -0.71
SMARCD2-208ENST00000580054 IGHDP01880 384 aa10.61□□□□□ -0.71
SMARCD2-208ENST00000580054 KLRC1P26715 233 aa10.61□□□□□ -0.71
SMARCD2-208ENST00000580054 ACTR2P61160 394 aa10.61□□□□□ -0.71
SMARCD2-208ENST00000580054 KIZQ2M2Z5 673 aa10.61□□□□□ -0.71
SMARCD2-208ENST00000580054 SPECC1Q5M775 1068 aa10.61□□□□□ -0.71
SMARCD2-208ENST00000580054 CCDC149Q6ZUS6 474 aa10.61□□□□□ -0.71
SMARCD2-208ENST00000580054 NME8Q8N427 588 aa10.61□□□□□ -0.71
SMARCD2-208ENST00000580054 SLC22A17Q8WUG5 538 aa10.61□□□□□ -0.71
SMARCD2-208ENST00000580054 RSAD2Q8WXG1 361 aa10.61□□□□□ -0.71
SMARCD2-208ENST00000580054 RUBCNQ92622 972 aa10.61□□□□□ -0.71
SMARCD2-208ENST00000580054 CDHR1Q96JP9 859 aa10.61□□□□□ -0.71
SMARCD2-208ENST00000580054 ZBP1Q9H171 429 aa10.61□□□□□ -0.71
SMARCD2-208ENST00000580054 IL25Q9H293 177 aa10.61□□□□□ -0.71
SMARCD2-208ENST00000580054 ELAC1Q9H777 363 aaKnown RBP10.61□□□□□ -0.71
SMARCD2-208ENST00000580054 JADE2Q9NQC1 790 aa10.61□□□□□ -0.71
SMARCD2-208ENST00000580054 DZANK1Q9NVP4 752 aa10.61□□□□□ -0.71
SMARCD2-208ENST00000580054 SLC9A2Q9UBY0 812 aa10.61□□□□□ -0.71
SMARCD2-208ENST00000580054 CA14Q9ULX7 337 aa10.61□□□□□ -0.71
SMARCD2-208ENST00000580054 DOCK6Q96HP0 2047 aa10.6□□□□□ -0.71
SMARCD2-208ENST00000580054 POTEMA6NI47 508 aa10.6□□□□□ -0.71
SMARCD2-208ENST00000580054 STK25O00506 426 aa10.6□□□□□ -0.71
SMARCD2-208ENST00000580054 IFIT3O14879 490 aaKnown RBP10.6□□□□□ -0.71
SMARCD2-208ENST00000580054 GPR182O15218 404 aa10.6□□□□□ -0.71
SMARCD2-208ENST00000580054 N4BP1O75113 896 aaKnown RBP10.6□□□□□ -0.71
SMARCD2-208ENST00000580054 CXCL14O95715 111 aa10.6□□□□□ -0.71
SMARCD2-208ENST00000580054 VTNP04004 478 aa10.6□□□□□ -0.71
SMARCD2-208ENST00000580054 DCNP07585 359 aaKnown RBP10.6□□□□□ -0.71
SMARCD2-208ENST00000580054 SP9P0CG40 484 aa10.6□□□□□ -0.71
SMARCD2-208ENST00000580054 STAT5BP51692 787 aa10.6□□□□□ -0.71
SMARCD2-208ENST00000580054 TROAPQ12815 778 aa10.6□□□□□ -0.71
SMARCD2-208ENST00000580054 TRDNQ13061 729 aa10.6□□□□□ -0.71
SMARCD2-208ENST00000580054 POTEGQ6S5H5 508 aa10.6□□□□□ -0.71
SMARCD2-208ENST00000580054 ABI1Q8IZP0 508 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms