RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 CCDC43Q96MW1 224 aaKnown RBP12.49□□□□□ -0.41
TRAPPC8-204ENST00000578252 PNMA5Q96PV4 448 aa12.49□□□□□ -0.41
TRAPPC8-204ENST00000578252 GOLPH3LQ9H4A5 285 aa12.49□□□□□ -0.41
TRAPPC8-204ENST00000578252 DBR1Q9UK59 544 aaKnown RBP12.49□□□□□ -0.41
TRAPPC8-204ENST00000578252 SCN10AQ9Y5Y9 1956 aa12.49□□□□□ -0.41
TRAPPC8-204ENST00000578252 COL1A2P08123 1366 aa12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 HBP1O60381 514 aa12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 KINO60870 393 aaKnown RBP12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 EYA4O95677 639 aa12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 ASGR1P07306 291 aa12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 YWHABP31946 246 aaKnown RBP12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 GJA8P48165 433 aa12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 PLCB4Q15147 1175 aa12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 ECM1Q16610 540 aa12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 KANK3Q6NY19 840 aa12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 TRIM50Q86XT4 487 aa12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 EXOC8Q8IYI6 725 aa12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 CEP57L1Q8IYX8 460 aa12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 FMR1NBQ8N0W7 255 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 PDILTQ8N807 584 aa12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 ENGASEQ8NFI3 743 aa12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 U2AF1L4Q8WU68 220 aaKnown RBP12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 LARP4BQ92615 738 aaKnown RBP12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 DHX58Q96C10 678 aa12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 TIGD1Q96MW7 591 aa12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 SEZ6LQ9BYH1 1024 aa12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 LRRC27Q9C0I9 530 aa12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 WRAP73Q9P2S5 460 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 PHF24Q9UPV7 400 aa12.48□□□□□ -0.41
TRAPPC8-204ENST00000578252 ARHGEF35A5YM69 484 aa12.47□□□□□ -0.41
TRAPPC8-204ENST00000578252 RRN3P2A6NIE6 340 aa12.47□□□□□ -0.41
TRAPPC8-204ENST00000578252 SMAPO00193 183 aa12.47□□□□□ -0.41
TRAPPC8-204ENST00000578252 HAS3O00219 553 aa12.47□□□□□ -0.41
TRAPPC8-204ENST00000578252 ZNF202O95125 648 aa12.47□□□□□ -0.41
TRAPPC8-204ENST00000578252 MYCP01106 439 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC8-204ENST00000578252 TFRCP02786 760 aaKnown RBP12.47□□□□□ -0.41
TRAPPC8-204ENST00000578252 SLFN14P0C7P3 912 aa12.47□□□□□ -0.41
TRAPPC8-204ENST00000578252 ACLYP53396 1101 aa12.47□□□□□ -0.41
TRAPPC8-204ENST00000578252 AMPD3Q01432 767 aa12.47□□□□□ -0.41
TRAPPC8-204ENST00000578252 SKOR2Q2VWA4 1001 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC8-204ENST00000578252 TPRNQ4KMQ1 711 aa12.47□□□□□ -0.41
TRAPPC8-204ENST00000578252 ZNF484Q5JVG2 852 aa12.47□□□□□ -0.41
TRAPPC8-204ENST00000578252 RAD54LQ92698 747 aa12.47□□□□□ -0.41
TRAPPC8-204ENST00000578252 GLT1D1Q96MS3 346 aa12.47□□□□□ -0.41
TRAPPC8-204ENST00000578252 JPH2Q9BR39 696 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC8-204ENST00000578252 NIFKQ9BYG3 293 aaKnown RBP12.47□□□□□ -0.41
TRAPPC8-204ENST00000578252 TNMDQ9H2S6 317 aa12.47□□□□□ -0.41
TRAPPC8-204ENST00000578252 KCND2Q9NZV8 630 aa12.47□□□□□ -0.41
TRAPPC8-204ENST00000578252 HOOK1Q9UJC3 728 aaKnown RBP12.47□□□□□ -0.41
TRAPPC8-204ENST00000578252 KAT6AQ92794 2004 aa12.47□□□□□ -0.41
TRAPPC8-204ENST00000578252 A0A087X0B3 334 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 E9PMD0 336 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 NR1I2O75469 434 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 STBD1O95210 358 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 MYL1P05976 194 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 PLA2G4BP0C869 781 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 GNAT1P11488 350 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 LIG1P18858 919 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 ATP4AP20648 1035 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 MARK3P27448 753 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 RFC5P40937 340 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 RARRES1P49788 294 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 PTPN11Q06124 597 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 SNW1Q13573 536 aaKnown RBP12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 KIAA0753Q2KHM9 967 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 NAALADL2Q58DX5 795 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 XKR9Q5GH70 373 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 CXCL17Q6UXB2 119 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 KRBA2Q6ZNG9 492 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 ANO5Q75V66 913 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 SV2BQ7L1I2 683 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 KCNK18Q7Z418 384 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 ELOA2Q8IYF1 753 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 SYT2Q8N9I0 419 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 CNNM3Q8NE01 707 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 PIGOQ8TEQ8 1089 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 KAT2BQ92831 832 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 CEP170P1Q96L14 293 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 PLIN2Q99541 437 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 TIPINQ9BVW5 301 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 PANK2Q9BZ23 570 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 BHMT2Q9H2M3 363 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 BLOC1S4Q9NUP1 217 aa12.46□□□□□ -0.41
TRAPPC8-204ENST00000578252 NRCAMQ92823 1304 aa12.45□□□□□ -0.42
TRAPPC8-204ENST00000578252 C3orf80F5H4A9 247 aa12.45□□□□□ -0.42
TRAPPC8-204ENST00000578252 ACTN4O43707 911 aaKnown RBP12.45□□□□□ -0.42
TRAPPC8-204ENST00000578252 GAS2O43903 313 aaKnown RBP12.45□□□□□ -0.42
TRAPPC8-204ENST00000578252 SSBP05455 408 aaKnown RBP eCLIP12.45□□□□□ -0.42
TRAPPC8-204ENST00000578252 PSMC6P62333 389 aa12.45□□□□□ -0.42
TRAPPC8-204ENST00000578252 PPFIA1Q13136 1202 aa12.45□□□□□ -0.42
TRAPPC8-204ENST00000578252 TARBP2Q15633 366 aaKnown RBP12.45□□□□□ -0.42
TRAPPC8-204ENST00000578252 NFKBIBQ15653 356 aa12.45□□□□□ -0.42
TRAPPC8-204ENST00000578252 LONRF3Q496Y0 759 aa12.45□□□□□ -0.42
TRAPPC8-204ENST00000578252 NFRKBQ6P4R8 1299 aa12.45□□□□□ -0.42
TRAPPC8-204ENST00000578252 SESTD1Q86VW0 696 aa12.45□□□□□ -0.42
TRAPPC8-204ENST00000578252 C7orf31Q8N865 590 aa12.45□□□□□ -0.42
TRAPPC8-204ENST00000578252 RNPEPQ9H4A4 650 aa12.45□□□□□ -0.42
TRAPPC8-204ENST00000578252 NPDC1Q9NQX5 325 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC8-204ENST00000578252 CYP26B1Q9NR63 512 aa12.45□□□□□ -0.42
TRAPPC8-204ENST00000578252 KBTBD4Q9NVX7 518 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms