RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 LINC01565O15544 149 aa12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 DHX15O43143 795 aaKnown RBP12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 GLP2RO95838 553 aa12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 EOMESO95936 686 aa12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 ANKRD54Q6NXT1 300 aa12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 ADGRD2Q7Z7M1 963 aa12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 FBXL6Q8N531 539 aa12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 LINC01465Q8N7H1 131 aa12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 MAP7D2Q96T17 732 aa12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 ADAM2Q99965 735 aa12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 TRAIPQ9BWF2 469 aa12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 CWH43Q9H720 699 aa12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 PKD2L1Q9P0L9 805 aa12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 PCDHA10Q9Y5I2 948 aa12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 GOLGA8AA7E2F4 631 aa12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 TBKBP1A7MCY6 615 aa12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 GOLGA8BA8MQT2 603 aa12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 IPO5O00410 1097 aaKnown RBP12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 CCNE2O96020 404 aa12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 SKIP12755 728 aa12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 SFNP31947 248 aa12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 KRT17Q04695 432 aa12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 CCDC148Q8NFR7 591 aa12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 CHST12Q9NRB3 414 aa12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 PPME1Q9Y570 386 aa12.74□□□□□ -0.37
SMARCE1-214ENST00000578112 CHD7Q9P2D1 2997 aa12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 PRUNE2Q8WUY3 3088 aa12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 CDH23Q9H251 3354 aa12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 ZBTB42B2RXF5 422 aa12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 GPR32O75388 356 aa12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 ITIH3Q06033 890 aa12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 FAM228AQ86W67 206 aa12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 CCDC60Q8IWA6 550 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 UBALD2Q8IYN6 164 aa12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 THNSL1Q8IYQ7 743 aa12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 ZNF558Q96NG5 402 aa12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 NRBP2Q9NSY0 501 aa12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 DZANK1Q9NVP4 752 aa12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 ZSCAN20P17040 1043 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 JAK3P52333 1124 aa12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 NFX1Q12986 1120 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 PTPN21Q16825 1174 aa12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 PAN2Q504Q3 1202 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 SPOUT1Q5T280 376 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 KCNB2Q92953 911 aa12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 RIT2Q99578 217 aa12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 ZNF577Q9BSK1 485 aa12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 S1PR5Q9H228 398 aa12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 ANO2Q9NQ90 1003 aa12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 DACT1Q9NYF0 836 aa12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 GTF3C3Q9Y5Q9 886 aa12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 BDP1A6H8Y1 2624 aa12.73□□□□□ -0.37
SMARCE1-214ENST00000578112 WDR64B1ANS9 1081 aa12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 PRPF3O43395 683 aaKnown RBP12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 MGEA5O60502 916 aa12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 RXRAP19793 462 aa12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 POLGP54098 1239 aaPredicted RBP12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 SMC1AQ14683 1233 aaKnown RBP12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 TYW1BQ6NUM6 668 aa12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 CMTR1Q8N1G2 835 aaKnown RBP12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 TRAPPC12Q8WVT3 735 aa12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 SH3GLB2Q9NR46 395 aa12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 V9GY48 417 aaPredicted RBP12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 MYH9P35579 1960 aaKnown RBP12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 EPB41L2O43491 1005 aaKnown RBP12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 GTF2F1P35269 517 aaKnown RBP eCLIP12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 MTHFRP42898 656 aa12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 USP11P51784 963 aa12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 CLUL1Q15846 466 aa12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 SWSAP1Q6NVH7 229 aa12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 REXO1Q8N1G1 1221 aaKnown RBP12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 CYP2W1Q8TAV3 490 aa12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 PBXIP1Q96AQ6 731 aa12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 CASD1Q96PB1 797 aa12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 SPG21Q9NZD8 308 aa12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 BRWD1Q9NSI6 2320 aa12.72□□□□□ -0.37
SMARCE1-214ENST00000578112 TMEM62Q0P6H9 643 aa12.71□□□□□ -0.37
SMARCE1-214ENST00000578112 EXOC8Q8IYI6 725 aa12.71□□□□□ -0.37
SMARCE1-214ENST00000578112 MICAL1Q8TDZ2 1067 aa12.71□□□□□ -0.37
SMARCE1-214ENST00000578112 JPH2Q9BR39 696 aaPredicted RBP12.71□□□□□ -0.37
SMARCE1-214ENST00000578112 INO80BQ9C086 356 aaPredicted RBP12.71□□□□□ -0.37
SMARCE1-214ENST00000578112 ADAMTS10Q9H324 1103 aa12.71□□□□□ -0.37
SMARCE1-214ENST00000578112 TYW1Q9NV66 732 aaKnown RBP12.71□□□□□ -0.37
SMARCE1-214ENST00000578112 FAM86B1E9PN63 330 aa12.71□□□□□ -0.38
SMARCE1-214ENST00000578112 ST18O60284 1047 aa12.71□□□□□ -0.38
SMARCE1-214ENST00000578112 FAM86B2P0C5J1 330 aa12.71□□□□□ -0.38
SMARCE1-214ENST00000578112 ATP4AP20648 1035 aa12.71□□□□□ -0.38
SMARCE1-214ENST00000578112 ECHDC2Q86YB7 292 aa12.71□□□□□ -0.38
SMARCE1-214ENST00000578112 ABI1Q8IZP0 508 aa12.71□□□□□ -0.38
SMARCE1-214ENST00000578112 RNF26Q9BY78 433 aaPredicted RBP12.71□□□□□ -0.38
SMARCE1-214ENST00000578112 FAM217BQ9NTX9 383 aaPredicted RBP12.71□□□□□ -0.38
SMARCE1-214ENST00000578112 RNF19AQ9NV58 838 aa12.71□□□□□ -0.38
SMARCE1-214ENST00000578112 TMEM260Q9NX78 707 aa12.71□□□□□ -0.38
SMARCE1-214ENST00000578112 BRPF3Q9ULD4 1205 aa12.71□□□□□ -0.38
SMARCE1-214ENST00000578112 BARX2Q9UMQ3 279 aaPredicted RBP12.71□□□□□ -0.38
SMARCE1-214ENST00000578112 KLF18A0A0U1RQI7 1052 aa12.7□□□□□ -0.38
SMARCE1-214ENST00000578112 C1RP00736 705 aa12.7□□□□□ -0.38
SMARCE1-214ENST00000578112 OATP04181 439 aa12.7□□□□□ -0.38
SMARCE1-214ENST00000578112 EIF4BP23588 611 aaKnown RBP12.7□□□□□ -0.38
SMARCE1-214ENST00000578112 METAP2P50579 478 aaKnown RBP eCLIP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms