RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 RELAQ04206 551 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 KRT32Q14532 448 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 RRS1Q15050 365 aaKnown RBP8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 ARL13BQ3SXY8 428 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 HAUS3Q68CZ6 603 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 TMC4Q7Z404 712 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 PPP1R42Q7Z4L9 355 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 DDX42Q86XP3 938 aaKnown RBP eCLIP8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 GRAMD2AQ8IUY3 354 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 CCNJLQ8IV13 435 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 RHOT2Q8IXI1 618 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 SPATA4Q8NEY3 305 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 PLEKHO2Q8TD55 490 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 MORC4Q8TE76 937 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 NUDCD1Q96RS6 583 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 LRRC1Q9BTT6 524 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 LRMDAQ9H2I8 198 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 ZNF304Q9HCX3 659 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 PIH1D3Q9NQM4 214 aaKnown RBP8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 NMRK1Q9NWW6 199 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 CHPF2Q9P2E5 772 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 THEGQ9P2T0 379 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 ZNHIT2Q9UHR6 403 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 STK38LQ9Y2H1 464 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 USP15Q9Y4E8 981 aaPredicted RBP8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 ZNF335Q9H4Z2 1342 aaPredicted RBP8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 NRXN3Q9Y4C0 1643 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 FAM237AA0A1B0GTK4 181 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 SOWAHBA6NEL2 793 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 FAM47E-STBD1D6RA91 191 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 BOLA2-SMG1P6H3BVE0 249 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 CTNND1O60716 968 aaKnown RBP8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 GLRX3O76003 335 aaKnown RBP8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 APOEP02649 317 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 LYNP07948 512 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 CFHP08603 1231 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 PIM1P11309 404 aaPredicted RBP8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 RPS6KB1P23443 525 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 ERCC5P28715 1186 aaPredicted RBP8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 MXI1P50539 228 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 RASSF2P50749 326 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 RBL2Q08999 1139 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 WTAPQ15007 396 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 STK38Q15208 465 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 EAPPQ56P03 285 aaPredicted RBP8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 ZC3H18Q86VM9 953 aaKnown RBP8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 VPS36Q86VN1 386 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 LRRC8CQ8TDW0 803 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 UCMAQ8WVF2 138 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 FERMT2Q96AC1 680 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 DGCR14Q96DF8 476 aaKnown RBP8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 CAPZA3Q96KX2 299 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 NSMCE3Q96MG7 304 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 GPR101Q96P66 508 aaPredicted RBP8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 SRPK1Q96SB4 655 aaKnown RBP8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 UNKQ9C0B0 810 aaKnown RBP8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 KLHL4Q9C0H6 718 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 SLAIN2Q9P270 581 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 PCSK1NQ9UHG2 260 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 DMGDHQ9UI17 866 aaKnown RBP8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 DSEQ9UL01 958 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 GUCA1BQ9UMX6 200 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 SNX12Q9UMY4 172 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 COMMD10Q9Y6G5 202 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 USH1CQ9Y6N9 552 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 SETBP1Q9Y6X0 1596 aa8.59□□□□□ -1.04
TOM1L1-220ENST00000575333 ADAMTS13Q76LX8 1427 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 A0A088AWK7 358 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 EIF4E1BA6NMX2 242 aaKnown RBP8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 APBB1O00213 710 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 FBP2O00757 339 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 KMOO15229 486 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 SLC26A4O43511 780 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 NDUFA10O95299 355 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 OXSR1O95747 527 aaPredicted RBP8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 UBL4AP11441 157 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 PHBP35232 272 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 CCNFP41002 786 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 RPL26P61254 145 aaKnown RBP8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 POU5F1Q01860 360 aaKnown RBP8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 CYP4A11Q02928 519 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 CUL1Q13616 776 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 RASGRF1Q13972 1273 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 NECTIN1Q15223 517 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 NFE2L2Q16236 605 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 TWISTNBQ3B726 338 aaPredicted RBP8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 COBLL1Q53SF7 1204 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 SPDYAQ5MJ70 313 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 CLASRPQ8N2M8 674 aaKnown RBP8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 CRACR2BQ8N4Y2 399 aaPredicted RBP8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 TMCO5AQ8N6Q1 288 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 LINC00301Q8NCQ3 95 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 GAB3Q8WWW8 586 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 MED30Q96HR3 178 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 ASCC2Q9H1I8 757 aaPredicted RBP8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 ABHD10Q9NUJ1 306 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 USP20Q9Y2K6 914 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 NFE2L3Q9Y4A8 694 aa8.58□□□□□ -1.04
TOM1L1-220ENST00000575333 HYOU1Q9Y4L1 999 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms