RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 NLRX1Q86UT6 975 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 NSUN6Q8TEA1 469 aaKnown RBP11.47□□□□□ -0.57
USP43-205ENST00000574408 UPF1Q92900 1129 aaKnown RBP eCLIP11.47□□□□□ -0.57
USP43-205ENST00000574408 SLC35C1Q96A29 364 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 GANQ9H2C0 597 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 ACAD9Q9H845 621 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 LARSQ9P2J5 1176 aaKnown RBP11.47□□□□□ -0.57
USP43-205ENST00000574408 DBR1Q9UK59 544 aaKnown RBP11.47□□□□□ -0.57
USP43-205ENST00000574408 COL11A1P12107 1806 aaPredicted RBP11.47□□□□□ -0.57
USP43-205ENST00000574408 PARP14Q460N5 1801 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 PPP1R12BO60237 982 aaPredicted RBP11.47□□□□□ -0.57
USP43-205ENST00000574408 PSMC2P35998 433 aaKnown RBP11.47□□□□□ -0.57
USP43-205ENST00000574408 JAK3P52333 1124 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 CHMP4BP1P59074 171 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.47□□□□□ -0.57
USP43-205ENST00000574408 SRGAP1Q7Z6B7 1085 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 A1CFQ9NQ94 594 aaKnown RBP11.47□□□□□ -0.57
USP43-205ENST00000574408 AGPAT3Q9NRZ7 376 aa11.47□□□□□ -0.57
USP43-205ENST00000574408 MYH11P35749 1972 aa11.46□□□□□ -0.57
USP43-205ENST00000574408 RLFQ13129 1914 aa11.46□□□□□ -0.57
USP43-205ENST00000574408 LYPLA2O95372 231 aa11.46□□□□□ -0.57
USP43-205ENST00000574408 MAGEA1P43355 309 aa11.46□□□□□ -0.57
USP43-205ENST00000574408 PSMC5P62195 406 aa11.46□□□□□ -0.57
USP43-205ENST00000574408 GFPT1Q06210 699 aaPredicted RBP11.46□□□□□ -0.57
USP43-205ENST00000574408 XRRA1Q6P2D8 792 aa11.46□□□□□ -0.57
USP43-205ENST00000574408 PAXIP1Q6ZW49 1069 aaPredicted RBP11.46□□□□□ -0.57
USP43-205ENST00000574408 GOLGA1Q92805 767 aa11.46□□□□□ -0.57
USP43-205ENST00000574408 TSGA10Q9BZW7 698 aa11.46□□□□□ -0.57
USP43-205ENST00000574408 HOXC10Q9NYD6 342 aa11.46□□□□□ -0.57
USP43-205ENST00000574408 SNCAIPQ9Y6H5 919 aa11.46□□□□□ -0.57
USP43-205ENST00000574408 SSU72P8A0A1W2PR75 194 aa11.46□□□□□ -0.58
USP43-205ENST00000574408 ADM5C9JUS6 153 aa11.46□□□□□ -0.58
USP43-205ENST00000574408 BACH1O14867 736 aa11.46□□□□□ -0.58
USP43-205ENST00000574408 SFNP31947 248 aa11.46□□□□□ -0.58
USP43-205ENST00000574408 NPEPPSP55786 919 aa11.46□□□□□ -0.58
USP43-205ENST00000574408 SP4Q02446 784 aa11.46□□□□□ -0.58
USP43-205ENST00000574408 TUBB2AQ13885 445 aa11.46□□□□□ -0.58
USP43-205ENST00000574408 XKR9Q5GH70 373 aa11.46□□□□□ -0.58
USP43-205ENST00000574408 PLA2G4FQ68DD2 849 aa11.46□□□□□ -0.58
USP43-205ENST00000574408 CEP112Q8N8E3 955 aa11.46□□□□□ -0.58
USP43-205ENST00000574408 FAM133AQ8N9E0 248 aa11.46□□□□□ -0.58
USP43-205ENST00000574408 CNKSR2Q8WXI2 1034 aa11.46□□□□□ -0.58
USP43-205ENST00000574408 SYN2Q92777 582 aaPredicted RBP11.46□□□□□ -0.58
USP43-205ENST00000574408 SECISBP2LQ93073 1101 aaKnown RBP11.46□□□□□ -0.58
USP43-205ENST00000574408 GPRASP2Q96D09 838 aa11.46□□□□□ -0.58
USP43-205ENST00000574408 TUBB2BQ9BVA1 445 aa11.46□□□□□ -0.58
USP43-205ENST00000574408 FHDC1Q9C0D6 1143 aaPredicted RBP11.46□□□□□ -0.58
USP43-205ENST00000574408 SPON1Q9HCB6 807 aa11.46□□□□□ -0.58
USP43-205ENST00000574408 CYP39A1Q9NYL5 469 aa11.46□□□□□ -0.58
USP43-205ENST00000574408 RNF181Q9P0P0 153 aa11.46□□□□□ -0.58
USP43-205ENST00000574408 HDAC6Q9UBN7 1215 aa11.46□□□□□ -0.58
USP43-205ENST00000574408 MYO6Q9UM54 1294 aa11.46□□□□□ -0.58
USP43-205ENST00000574408 SERPING1P05155 500 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 H2AFXP16104 143 aaPredicted RBP11.45□□□□□ -0.58
USP43-205ENST00000574408 PON1P27169 355 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 AMPD2Q01433 879 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 GBP6Q6ZN66 633 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 RSRC2Q7L4I2 434 aaKnown RBP11.45□□□□□ -0.58
USP43-205ENST00000574408 SULF1Q8IWU6 871 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 C4orf19Q8IY42 314 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 INPP4AQ96PE3 977 aaPredicted RBP11.45□□□□□ -0.58
USP43-205ENST00000574408 SPAG5Q96R06 1193 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 GPRC5CQ9NQ84 441 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 GCNT4Q9P109 453 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 FHOD1Q9Y613 1164 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 ATP2A1O14983 1001 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 PPP1R37O75864 691 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 ATP1A1P05023 1023 aaKnown RBP11.45□□□□□ -0.58
USP43-205ENST00000574408 UCHL3P15374 230 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 ASIC2Q16515 512 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 NFIL3Q16649 462 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 ASTE1Q2TB18 679 aaPredicted RBP11.45□□□□□ -0.58
USP43-205ENST00000574408 DCPSQ96C86 337 aaKnown RBP11.45□□□□□ -0.58
USP43-205ENST00000574408 MLXIPQ9HAP2 919 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 FRMD4BQ9Y2L6 1034 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 SORBS3O60504 671 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 EXOC3O60645 756 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 PEX10O60683 326 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 LCA5LO95447 670 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 KLHL30Q0D2K2 578 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 WHAMMP3Q1A5X7 153 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 KLHDC7AQ5VTJ3 777 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 ANKRD13CQ8N6S4 541 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 GOLGA5Q8TBA6 731 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 RBM46Q8TBY0 533 aaKnown RBP11.45□□□□□ -0.58
USP43-205ENST00000574408 BORCS6Q96GS4 357 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 MKNK1Q9BUB5 465 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 MOV10L1Q9BXT6 1211 aaKnown RBP11.45□□□□□ -0.58
USP43-205ENST00000574408 PLCB1Q9NQ66 1216 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 ADARB2Q9NS39 739 aaKnown RBP11.45□□□□□ -0.58
USP43-205ENST00000574408 PCDHA10Q9Y5I2 948 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 CSADQ9Y600 493 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 LOXHD1Q8IVV2 1947 aa11.45□□□□□ -0.58
USP43-205ENST00000574408 PLS3P13797 630 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 CLCN6P51797 869 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 TREML2Q5T2D2 321 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 ZNF746Q6NUN9 644 aaPredicted RBP11.44□□□□□ -0.58
USP43-205ENST00000574408 RDH13Q8NBN7 331 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 RABGGTAQ92696 567 aa11.44□□□□□ -0.58
USP43-205ENST00000574408 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms