RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 MYO10Q9HD67 2058 aa19.97■□□□□ 0.79
CCDC40-211ENST00000574099 COL1A2P08123 1366 aa19.96■□□□□ 0.79
CCDC40-211ENST00000574099 ATG7O95352 703 aa19.96■□□□□ 0.79
CCDC40-211ENST00000574099 WEE2P0C1S8 567 aa19.96■□□□□ 0.79
CCDC40-211ENST00000574099 HOXB8P17481 243 aaPredicted RBP19.96■□□□□ 0.79
CCDC40-211ENST00000574099 CEP55Q53EZ4 464 aa19.96■□□□□ 0.79
CCDC40-211ENST00000574099 WWC2Q6AWC2 1192 aa19.96■□□□□ 0.79
CCDC40-211ENST00000574099 PDXDC2PQ6P474 469 aa19.96■□□□□ 0.79
CCDC40-211ENST00000574099 TMTC3Q6ZXV5 915 aa19.96■□□□□ 0.79
CCDC40-211ENST00000574099 EXOC6Q8TAG9 804 aa19.96■□□□□ 0.79
CCDC40-211ENST00000574099 CASP10Q92851 521 aa19.96■□□□□ 0.79
CCDC40-211ENST00000574099 ZNF558Q96NG5 402 aa19.96■□□□□ 0.79
CCDC40-211ENST00000574099 CASD1Q96PB1 797 aa19.96■□□□□ 0.79
CCDC40-211ENST00000574099 ANO3Q9BYT9 981 aa19.96■□□□□ 0.79
CCDC40-211ENST00000574099 TMEM117Q9H0C3 514 aa19.96■□□□□ 0.79
CCDC40-211ENST00000574099 NGRNQ9NPE2 291 aaKnown RBP19.96■□□□□ 0.79
CCDC40-211ENST00000574099 ZNF302Q9NR11 478 aa19.96■□□□□ 0.79
CCDC40-211ENST00000574099 RNF19AQ9NV58 838 aa19.96■□□□□ 0.79
CCDC40-211ENST00000574099 HCFC2Q9Y5Z7 792 aa19.96■□□□□ 0.79
CCDC40-211ENST00000574099 IGKV6D-21A0A0A0MT36 114 aa19.95■□□□□ 0.78
CCDC40-211ENST00000574099 PRR23AA6NEV1 266 aa19.95■□□□□ 0.78
CCDC40-211ENST00000574099 ZBTB42B2RXF5 422 aa19.95■□□□□ 0.78
CCDC40-211ENST00000574099 PROB1E7EW31 1015 aa19.95■□□□□ 0.78
CCDC40-211ENST00000574099 SGSM2O43147 1006 aa19.95■□□□□ 0.78
CCDC40-211ENST00000574099 ASGR2P07307 311 aa19.95■□□□□ 0.78
CCDC40-211ENST00000574099 CALM1P0DP23 149 aa19.95■□□□□ 0.78
CCDC40-211ENST00000574099 CALM2P0DP24 149 aa19.95■□□□□ 0.78
CCDC40-211ENST00000574099 CALM3P0DP25 149 aa19.95■□□□□ 0.78
CCDC40-211ENST00000574099 CRYBB1P53674 252 aaPredicted RBP19.95■□□□□ 0.78
CCDC40-211ENST00000574099 NAPAP54920 295 aa19.95■□□□□ 0.78
CCDC40-211ENST00000574099 DSC3Q14574 896 aa19.95■□□□□ 0.78
CCDC40-211ENST00000574099 TPRNQ4KMQ1 711 aa19.95■□□□□ 0.78
CCDC40-211ENST00000574099 CES5AQ6NT32 575 aa19.95■□□□□ 0.78
CCDC40-211ENST00000574099 TYW1BQ6NUM6 668 aa19.95■□□□□ 0.78
CCDC40-211ENST00000574099 ABHD15Q6UXT9 468 aa19.95■□□□□ 0.78
CCDC40-211ENST00000574099 MICU3Q86XE3 530 aa19.95■□□□□ 0.78
CCDC40-211ENST00000574099 UBALD2Q8IYN6 164 aa19.95■□□□□ 0.78
CCDC40-211ENST00000574099 ABI1Q8IZP0 508 aa19.95■□□□□ 0.78
CCDC40-211ENST00000574099 LRRC43Q8N309 656 aa19.95■□□□□ 0.78
CCDC40-211ENST00000574099 METTL13Q8N6R0 699 aa19.95■□□□□ 0.78
CCDC40-211ENST00000574099 RNF169Q8NCN4 708 aa19.95■□□□□ 0.78
CCDC40-211ENST00000574099 LRRC2Q9BYS8 371 aa19.95■□□□□ 0.78
CCDC40-211ENST00000574099 ELAC1Q9H777 363 aaKnown RBP19.95■□□□□ 0.78
CCDC40-211ENST00000574099 SLC12A7Q9Y666 1083 aa19.95■□□□□ 0.78
CCDC40-211ENST00000574099 MYH9P35579 1960 aaKnown RBP19.94■□□□□ 0.78
CCDC40-211ENST00000574099 C22orf31O95567 290 aa19.94■□□□□ 0.78
CCDC40-211ENST00000574099 MCM5P33992 734 aa19.94■□□□□ 0.78
CCDC40-211ENST00000574099 PPM1AP35813 382 aa19.94■□□□□ 0.78
CCDC40-211ENST00000574099 ZNF76P36508 570 aa19.94■□□□□ 0.78
CCDC40-211ENST00000574099 NUBP1P53384 320 aa19.94■□□□□ 0.78
CCDC40-211ENST00000574099 FAM189BP81408 668 aa19.94■□□□□ 0.78
CCDC40-211ENST00000574099 KRT17Q04695 432 aa19.94■□□□□ 0.78
CCDC40-211ENST00000574099 ZNF484Q5JVG2 852 aa19.94■□□□□ 0.78
CCDC40-211ENST00000574099 CKAP2LQ8IYA6 745 aa19.94■□□□□ 0.78
CCDC40-211ENST00000574099 MAP4K1Q92918 833 aa19.94■□□□□ 0.78
CCDC40-211ENST00000574099 TMEM87BQ96K49 555 aa19.94■□□□□ 0.78
CCDC40-211ENST00000574099 SPG21Q9NZD8 308 aa19.94■□□□□ 0.78
CCDC40-211ENST00000574099 GPR32O75388 356 aa19.93■□□□□ 0.78
CCDC40-211ENST00000574099 ATP4AP20648 1035 aa19.93■□□□□ 0.78
CCDC40-211ENST00000574099 CLCN3P51790 818 aa19.93■□□□□ 0.78
CCDC40-211ENST00000574099 SMC1AQ14683 1233 aaKnown RBP19.93■□□□□ 0.78
CCDC40-211ENST00000574099 RARS2Q5T160 578 aaKnown RBP19.93■□□□□ 0.78
CCDC40-211ENST00000574099 SWSAP1Q6NVH7 229 aa19.93■□□□□ 0.78
CCDC40-211ENST00000574099 TMTC2Q8N394 836 aa19.93■□□□□ 0.78
CCDC40-211ENST00000574099 ZNF668Q96K58 619 aaPredicted RBP19.93■□□□□ 0.78
CCDC40-211ENST00000574099 NECTIN4Q96NY8 510 aa19.93■□□□□ 0.78
CCDC40-211ENST00000574099 ADAM7Q9H2U9 754 aa19.93■□□□□ 0.78
CCDC40-211ENST00000574099 MFSD1Q9H3U5 465 aa19.93■□□□□ 0.78
CCDC40-211ENST00000574099 RIC8AQ9NPQ8 531 aa19.93■□□□□ 0.78
CCDC40-211ENST00000574099 CNTNAP5Q8WYK1 1306 aa19.93■□□□□ 0.78
CCDC40-211ENST00000574099 VPS13AQ96RL7 3174 aa19.93■□□□□ 0.78
CCDC40-211ENST00000574099 C2orf71A6NGG8 1288 aa19.92■□□□□ 0.78
CCDC40-211ENST00000574099 MEIS1O00470 390 aa19.92■□□□□ 0.78
CCDC40-211ENST00000574099 HOXA2O43364 376 aa19.92■□□□□ 0.78
CCDC40-211ENST00000574099 CLASP2O75122 1294 aaKnown RBP19.92■□□□□ 0.78
CCDC40-211ENST00000574099 NBL1P41271 181 aa19.92■□□□□ 0.78
CCDC40-211ENST00000574099 ADCY7P51828 1080 aa19.92■□□□□ 0.78
CCDC40-211ENST00000574099 FOXK2Q01167 660 aa19.92■□□□□ 0.78
CCDC40-211ENST00000574099 KANK3Q6NY19 840 aa19.92■□□□□ 0.78
CCDC40-211ENST00000574099 MIS18BP1Q6P0N0 1132 aa19.92■□□□□ 0.78
CCDC40-211ENST00000574099 FAM43BQ6ZT52 329 aaPredicted RBP19.92■□□□□ 0.78
CCDC40-211ENST00000574099 FRMD5Q7Z6J6 570 aa19.92■□□□□ 0.78
CCDC40-211ENST00000574099 C12orf76Q8N812 135 aaPredicted RBP19.92■□□□□ 0.78
CCDC40-211ENST00000574099 TDRD5Q8NAT2 981 aaKnown RBP19.92■□□□□ 0.78
CCDC40-211ENST00000574099 FANCBQ8NB91 859 aa19.92■□□□□ 0.78
CCDC40-211ENST00000574099 MTA3Q9BTC8 594 aa19.92■□□□□ 0.78
CCDC40-211ENST00000574099 SPTBN4Q9H254 2564 aa19.91■□□□□ 0.78
CCDC40-211ENST00000574099 NT5C1B-RDH14C9J2C7 533 aa19.91■□□□□ 0.78
CCDC40-211ENST00000574099 SREBF1P36956 1147 aa19.91■□□□□ 0.78
CCDC40-211ENST00000574099 LIFRP42702 1097 aa19.91■□□□□ 0.78
CCDC40-211ENST00000574099 METAP2P50579 478 aaKnown RBP eCLIP19.91■□□□□ 0.78
CCDC40-211ENST00000574099 ITIH3Q06033 890 aa19.91■□□□□ 0.78
CCDC40-211ENST00000574099 CLLU1OSQ5K130 101 aa19.91■□□□□ 0.78
CCDC40-211ENST00000574099 ASTLQ6HA08 431 aaPredicted RBP19.91■□□□□ 0.78
CCDC40-211ENST00000574099 PLA2G4DQ86XP0 818 aa19.91■□□□□ 0.78
CCDC40-211ENST00000574099 ECHDC2Q86YB7 292 aa19.91■□□□□ 0.78
CCDC40-211ENST00000574099 SLC39A11Q8N1S5 342 aa19.91■□□□□ 0.78
CCDC40-211ENST00000574099 MRPL43Q8N983 215 aaKnown RBP19.91■□□□□ 0.78
CCDC40-211ENST00000574099 AKT3Q9Y243 479 aa19.91■□□□□ 0.78
CCDC40-211ENST00000574099 PTPRZ1P23471 2315 aaPredicted RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms