RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 PLPPR4Q7Z2D5 763 aa13.29□□□□□ -0.28
NDE1-206ENST00000572967 CKAP2LQ8IYA6 745 aa13.29□□□□□ -0.28
NDE1-206ENST00000572967 LINC01599Q8WXQ3 324 aa13.29□□□□□ -0.28
NDE1-206ENST00000572967 TOP1MTQ969P6 601 aa13.29□□□□□ -0.28
NDE1-206ENST00000572967 LENG9Q96B70 501 aa13.29□□□□□ -0.28
NDE1-206ENST00000572967 SPATA32Q96LK8 384 aa13.29□□□□□ -0.28
NDE1-206ENST00000572967 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.29□□□□□ -0.28
NDE1-206ENST00000572967 GINS2Q9Y248 185 aa13.29□□□□□ -0.28
NDE1-206ENST00000572967 ADGRA3Q8IWK6 1321 aa13.29□□□□□ -0.28
NDE1-206ENST00000572967 ARID2Q68CP9 1835 aa13.29□□□□□ -0.28
NDE1-206ENST00000572967 TTC3P53804 2025 aa13.29□□□□□ -0.28
NDE1-206ENST00000572967 FNDC1Q4ZHG4 1894 aaPredicted RBP13.28□□□□□ -0.28
NDE1-206ENST00000572967 PLXNA4Q9HCM2 1894 aa13.28□□□□□ -0.28
NDE1-206ENST00000572967 IGKV6D-21A0A0A0MT36 114 aa13.28□□□□□ -0.28
NDE1-206ENST00000572967 DHX15O43143 795 aaKnown RBP13.28□□□□□ -0.28
NDE1-206ENST00000572967 CHMP2AO43633 222 aa13.28□□□□□ -0.28
NDE1-206ENST00000572967 ATG7O95352 703 aa13.28□□□□□ -0.28
NDE1-206ENST00000572967 OR52Z1P0C646 297 aa13.28□□□□□ -0.28
NDE1-206ENST00000572967 POU3F3P20264 500 aaPredicted RBP13.28□□□□□ -0.28
NDE1-206ENST00000572967 MCM7P33993 719 aa13.28□□□□□ -0.28
NDE1-206ENST00000572967 PRPHP41219 470 aa13.28□□□□□ -0.28
NDE1-206ENST00000572967 DNM1Q05193 864 aaKnown RBP13.28□□□□□ -0.28
NDE1-206ENST00000572967 CALCRLQ16602 461 aa13.28□□□□□ -0.28
NDE1-206ENST00000572967 EARS2Q5JPH6 523 aaKnown RBP13.28□□□□□ -0.28
NDE1-206ENST00000572967 MTHFD1LQ6UB35 978 aa13.28□□□□□ -0.28
NDE1-206ENST00000572967 ABHD15Q6UXT9 468 aa13.28□□□□□ -0.28
NDE1-206ENST00000572967 CLEC17AQ6ZS10 378 aa13.28□□□□□ -0.28
NDE1-206ENST00000572967 ATP8B4Q8TF62 1192 aa13.28□□□□□ -0.28
NDE1-206ENST00000572967 FAM20AQ96MK3 541 aa13.28□□□□□ -0.28
NDE1-206ENST00000572967 MBOAT7Q96N66 472 aa13.28□□□□□ -0.28
NDE1-206ENST00000572967 NECAB3Q96P71 396 aaPredicted RBP13.28□□□□□ -0.28
NDE1-206ENST00000572967 AGO3Q9H9G7 860 aaKnown RBP13.28□□□□□ -0.28
NDE1-206ENST00000572967 SAMM50Q9Y512 469 aa13.28□□□□□ -0.28
NDE1-206ENST00000572967 STK24Q9Y6E0 443 aa13.28□□□□□ -0.28
NDE1-206ENST00000572967 IGSF9BQ9UPX0 1349 aa13.28□□□□□ -0.28
NDE1-206ENST00000572967 COL1A2P08123 1366 aa13.28□□□□□ -0.28
NDE1-206ENST00000572967 GOLGA6L4A6NEF3 574 aa13.27□□□□□ -0.29
NDE1-206ENST00000572967 FAM205CA6NFA0 338 aa13.27□□□□□ -0.29
NDE1-206ENST00000572967 HBP1O60381 514 aa13.27□□□□□ -0.29
NDE1-206ENST00000572967 PPP6R2O75170 966 aa13.27□□□□□ -0.29
NDE1-206ENST00000572967 CTNNB1P35222 781 aa13.27□□□□□ -0.29
NDE1-206ENST00000572967 SLC26A2P50443 739 aa13.27□□□□□ -0.29
NDE1-206ENST00000572967 KRT76Q01546 638 aa13.27□□□□□ -0.29
NDE1-206ENST00000572967 PAK2Q13177 524 aa13.27□□□□□ -0.29
NDE1-206ENST00000572967 SLC39A14Q15043 492 aa13.27□□□□□ -0.29
NDE1-206ENST00000572967 ZNF174Q15697 407 aa13.27□□□□□ -0.29
NDE1-206ENST00000572967 FOXD4L6Q3SYB3 417 aaPredicted RBP13.27□□□□□ -0.29
NDE1-206ENST00000572967 EPC2Q52LR7 807 aa13.27□□□□□ -0.29
NDE1-206ENST00000572967 IER5Q5VY09 327 aa13.27□□□□□ -0.29
NDE1-206ENST00000572967 ZNF746Q6NUN9 644 aaPredicted RBP13.27□□□□□ -0.29
NDE1-206ENST00000572967 SWSAP1Q6NVH7 229 aa13.27□□□□□ -0.29
NDE1-206ENST00000572967 FOXD4L3Q6VB84 417 aaPredicted RBP13.27□□□□□ -0.29
NDE1-206ENST00000572967 GJA10Q969M2 543 aa13.27□□□□□ -0.29
NDE1-206ENST00000572967 USP28Q96RU2 1077 aa13.27□□□□□ -0.29
NDE1-206ENST00000572967 UHRF1Q96T88 793 aaPredicted RBP13.27□□□□□ -0.29
NDE1-206ENST00000572967 PCDHB6Q9Y5E3 794 aa13.27□□□□□ -0.29
NDE1-206ENST00000572967 PCDHA2Q9Y5H9 948 aa13.27□□□□□ -0.29
NDE1-206ENST00000572967 SMIM35A0A1B0GVV1 85 aa13.26□□□□□ -0.29
NDE1-206ENST00000572967 DDX11L8A8MPP1 907 aa13.26□□□□□ -0.29
NDE1-206ENST00000572967 ZBTB42B2RXF5 422 aa13.26□□□□□ -0.29
NDE1-206ENST00000572967 SPTLC2O15270 562 aa13.26□□□□□ -0.29
NDE1-206ENST00000572967 REV3LO60673 3130 aa13.26□□□□□ -0.29
NDE1-206ENST00000572967 TDP2O95551 362 aa13.26□□□□□ -0.29
NDE1-206ENST00000572967 RPLP2P05387 115 aaKnown RBP13.26□□□□□ -0.29
NDE1-206ENST00000572967 PSAPP07602 524 aa13.26□□□□□ -0.29
NDE1-206ENST00000572967 ATP4AP20648 1035 aa13.26□□□□□ -0.29
NDE1-206ENST00000572967 KLRC1P26715 233 aa13.26□□□□□ -0.29
NDE1-206ENST00000572967 ME1P48163 572 aa13.26□□□□□ -0.29
NDE1-206ENST00000572967 TOB1P50616 345 aaPredicted RBP13.26□□□□□ -0.29
NDE1-206ENST00000572967 ATP2C1P98194 919 aaPredicted RBP13.26□□□□□ -0.29
NDE1-206ENST00000572967 PRKCEQ02156 737 aa13.26□□□□□ -0.29
NDE1-206ENST00000572967 PTGDRQ13258 359 aa13.26□□□□□ -0.29
NDE1-206ENST00000572967 FAM173BQ6P4H8 233 aa13.26□□□□□ -0.29
NDE1-206ENST00000572967 TMEM192Q8IY95 271 aa13.26□□□□□ -0.29
NDE1-206ENST00000572967 SMAP1Q8IYB5 467 aaPredicted RBP13.26□□□□□ -0.29
NDE1-206ENST00000572967 KRI1Q8N9T8 703 aaKnown RBP13.26□□□□□ -0.29
NDE1-206ENST00000572967 LINC00301Q8NCQ3 95 aa13.26□□□□□ -0.29
NDE1-206ENST00000572967 RIT2Q99578 217 aa13.26□□□□□ -0.29
NDE1-206ENST00000572967 CELF4Q9BZC1 486 aaKnown RBP13.26□□□□□ -0.29
NDE1-206ENST00000572967 TBC1D22BQ9NU19 505 aa13.26□□□□□ -0.29
NDE1-206ENST00000572967 GABBR1Q9UBS5 961 aa13.26□□□□□ -0.29
NDE1-206ENST00000572967 WDR64B1ANS9 1081 aa13.25□□□□□ -0.29
NDE1-206ENST00000572967 TNFRSF10AO00220 468 aa13.25□□□□□ -0.29
NDE1-206ENST00000572967 MSH4O15457 936 aa13.25□□□□□ -0.29
NDE1-206ENST00000572967 EDIL3O43854 480 aa13.25□□□□□ -0.29
NDE1-206ENST00000572967 GAS7O60861 476 aa13.25□□□□□ -0.29
NDE1-206ENST00000572967 C22orf31O95567 290 aa13.25□□□□□ -0.29
NDE1-206ENST00000572967 VTNP04004 478 aa13.25□□□□□ -0.29
NDE1-206ENST00000572967 TXLNAP40222 546 aa13.25□□□□□ -0.29
NDE1-206ENST00000572967 CLCN3P51790 818 aa13.25□□□□□ -0.29
NDE1-206ENST00000572967 CEBPZQ03701 1054 aaKnown RBP13.25□□□□□ -0.29
NDE1-206ENST00000572967 GPM6BQ13491 265 aa13.25□□□□□ -0.29
NDE1-206ENST00000572967 UGCGQ16739 394 aa13.25□□□□□ -0.29
NDE1-206ENST00000572967 PAN2Q504Q3 1202 aaKnown RBP13.25□□□□□ -0.29
NDE1-206ENST00000572967 LRCH2Q5VUJ6 765 aa13.25□□□□□ -0.29
NDE1-206ENST00000572967 DTHD1Q6ZMT9 781 aa13.25□□□□□ -0.29
NDE1-206ENST00000572967 FIBCD1Q8N539 461 aa13.25□□□□□ -0.29
NDE1-206ENST00000572967 ERMNQ8TAM6 284 aa13.25□□□□□ -0.29
NDE1-206ENST00000572967 TMEM40Q8WWA1 233 aa13.25□□□□□ -0.29
NDE1-206ENST00000572967 HLA-CQ95604 372 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms