RNA–Protein interactions for RNA: ENST00000572686.1

SPOP-221, Transcript of speckle type BTB/POZ protein, humanhuman

Gene SPOP, Length 2,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-221ENST00000572686 HOMER1Q86YM7 354 aa8.41□□□□□ -1.06
SPOP-221ENST00000572686 AOPEPQ8N6M6 819 aa8.41□□□□□ -1.06
SPOP-221ENST00000572686 GPKOWQ92917 476 aaPredicted RBP eCLIP8.41□□□□□ -1.06
SPOP-221ENST00000572686 NECAB3Q96P71 396 aaPredicted RBP8.41□□□□□ -1.06
SPOP-221ENST00000572686 PIGSQ96S52 555 aa8.41□□□□□ -1.06
SPOP-221ENST00000572686 KCNH3Q9ULD8 1083 aa8.41□□□□□ -1.06
SPOP-221ENST00000572686 SIP14410 1827 aa8.4□□□□□ -1.06
SPOP-221ENST00000572686 ABHD14A-ACY1A0A1B0GW23 586 aa8.4□□□□□ -1.06
SPOP-221ENST00000572686 BIN1O00499 593 aa8.4□□□□□ -1.06
SPOP-221ENST00000572686 PLEKHA8P1O95397 391 aa8.4□□□□□ -1.06
SPOP-221ENST00000572686 UBA1P22314 1058 aaKnown RBP8.4□□□□□ -1.06
SPOP-221ENST00000572686 SKIV2LQ15477 1246 aaKnown RBP8.4□□□□□ -1.06
SPOP-221ENST00000572686 LONRF3Q496Y0 759 aa8.4□□□□□ -1.06
SPOP-221ENST00000572686 SPATA33Q96N06 139 aa8.4□□□□□ -1.06
SPOP-221ENST00000572686 C16orf70Q9BSU1 422 aa8.4□□□□□ -1.06
SPOP-221ENST00000572686 PHF20Q9BVI0 1012 aa8.4□□□□□ -1.06
SPOP-221ENST00000572686 BCAS3Q9H6U6 928 aa8.4□□□□□ -1.06
SPOP-221ENST00000572686 WDR70Q9NW82 654 aa8.4□□□□□ -1.06
SPOP-221ENST00000572686 VPS54Q9P1Q0 977 aa8.4□□□□□ -1.06
SPOP-221ENST00000572686 TUBE1Q9UJT0 475 aa8.4□□□□□ -1.06
SPOP-221ENST00000572686 FBXO2Q9UK22 296 aaPredicted RBP8.4□□□□□ -1.06
SPOP-221ENST00000572686 PCDHB6Q9Y5E3 794 aa8.4□□□□□ -1.06
SPOP-221ENST00000572686 hCG_1642624A0A1W2PR95 340 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 GCOM1H8Y6P7 765 aaPredicted RBP8.39□□□□□ -1.07
SPOP-221ENST00000572686 GJB5O95377 273 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 POLR2MP0CAP2 368 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 TGFB3P10600 412 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 COL9A1P20849 921 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 CCND2P30279 289 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 AAK1Q2M2I8 961 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 TMTC3Q6ZXV5 915 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 FCHSD1Q86WN1 690 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 ELOA2Q8IYF1 753 aaPredicted RBP8.39□□□□□ -1.07
SPOP-221ENST00000572686 ZBED2Q9BTP6 218 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 CEP131Q9UPN4 1083 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 FRMPD4Q14CM0 1322 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 PNMA6FA0A0J9YX94 578 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 BRD2P25440 801 aaKnown RBP8.39□□□□□ -1.07
SPOP-221ENST00000572686 HOXC8P31273 242 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 KRT2P35908 639 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 MRPS9P82933 396 aaKnown RBP8.39□□□□□ -1.07
SPOP-221ENST00000572686 TRAF1Q13077 416 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 IKBKEQ14164 716 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 SPECC1Q5M775 1068 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 DNTTIP2Q5QJE6 756 aaKnown RBP8.39□□□□□ -1.07
SPOP-221ENST00000572686 KRBA2Q6ZNG9 492 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 SERINC5Q86VE9 423 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 SRBD1Q8N5C6 995 aaKnown RBP8.39□□□□□ -1.07
SPOP-221ENST00000572686 CNNM3Q8NE01 707 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 CTCFLQ8NI51 663 aaPredicted RBP8.39□□□□□ -1.07
SPOP-221ENST00000572686 RAD9AQ99638 391 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 MLXIPQ9HAP2 919 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 FAM13BQ9NYF5 915 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 COG5Q9UP83 839 aa8.39□□□□□ -1.07
SPOP-221ENST00000572686 SRPRBQ9Y5M8 271 aaKnown RBP8.39□□□□□ -1.07
SPOP-221ENST00000572686 BRWD1Q9NSI6 2320 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 KAT6AQ92794 2004 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 LINC01553A4QN01 128 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 SMTNL1A8MU46 457 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 H3BRB1 525 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 EFCAB14O75071 495 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 LGR5O75473 907 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 ATP2B1P20020 1258 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 ERVK-21P61565 698 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 GRIN1Q05586 938 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 LRMPQ12912 555 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 SEMA3FQ13275 785 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 PNOCQ13519 176 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 ISM2Q6H9L7 571 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.38□□□□□ -1.07
SPOP-221ENST00000572686 DBF4BQ8NFT6 615 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 GDPD5Q8WTR4 605 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 TUT1Q9H6E5 874 aaKnown RBP8.38□□□□□ -1.07
SPOP-221ENST00000572686 SUGCTQ9HAC7 445 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 LMCD1Q9NZU5 365 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 RAPGEFL1Q9UHV5 662 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 MORC2Q9Y6X9 1032 aaPredicted RBP8.38□□□□□ -1.07
SPOP-221ENST00000572686 C17orf102A2RUQ5 167 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 IKBKBO14920 756 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 TREHO43280 583 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 LGALS2P05162 132 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 ICAM3P32942 547 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 THPOP40225 353 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 NCAPHQ15003 741 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 GLIPR1L2Q4G1C9 344 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 EARS2Q5JPH6 523 aaKnown RBP8.38□□□□□ -1.07
SPOP-221ENST00000572686 FAM117BQ6P1L5 589 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 CACTINQ8WUQ7 758 aaKnown RBP8.38□□□□□ -1.07
SPOP-221ENST00000572686 ATP6V0A1Q93050 837 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 HLA-CQ95604 372 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 INPP4AQ96PE3 977 aaPredicted RBP8.38□□□□□ -1.07
SPOP-221ENST00000572686 TGS1Q96RS0 853 aaKnown RBP8.38□□□□□ -1.07
SPOP-221ENST00000572686 OSBPL7Q9BZF2 842 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 RNPEPQ9H4A4 650 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 HOOK1Q9UJC3 728 aaKnown RBP8.38□□□□□ -1.07
SPOP-221ENST00000572686 TELO2Q9Y4R8 837 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 PCDHA5Q9Y5H7 936 aa8.38□□□□□ -1.07
SPOP-221ENST00000572686 CNTNAP5Q8WYK1 1306 aa8.37□□□□□ -1.07
SPOP-221ENST00000572686 RSPH10B2B2RC85 870 aa8.37□□□□□ -1.07
SPOP-221ENST00000572686 SPATA31C2B4DYI2 1134 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms