RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 HINFPQ9BQA5 517 aa8.31□□□□□ -1.08
SMG6-205ENST00000570659 ZBP1Q9H171 429 aa8.31□□□□□ -1.08
SMG6-205ENST00000570659 CYP26B1Q9NR63 512 aa8.31□□□□□ -1.08
SMG6-205ENST00000570659 HELLSQ9NRZ9 838 aa8.31□□□□□ -1.08
SMG6-205ENST00000570659 DBR1Q9UK59 544 aaKnown RBP8.31□□□□□ -1.08
SMG6-205ENST00000570659 LZTS1Q9Y250 596 aa8.31□□□□□ -1.08
SMG6-205ENST00000570659 PCDHA2Q9Y5H9 948 aa8.31□□□□□ -1.08
SMG6-205ENST00000570659 FASNP49327 2511 aaKnown RBP8.3□□□□□ -1.08
SMG6-205ENST00000570659 hCG_1642624A0A1W2PR95 340 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 SHISA7A6NL88 538 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 CCER2I3L3R5 266 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 GPR32O75388 356 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 CSDE1O75534 798 aaKnown RBP8.3□□□□□ -1.08
SMG6-205ENST00000570659 CXCL14O95715 111 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 VTNP04004 478 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 LAG3P18627 525 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 MTHFRP42898 656 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 ITIH3Q06033 890 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 ITGB3BPQ13352 177 aaPredicted RBP8.3□□□□□ -1.08
SMG6-205ENST00000570659 GRM4Q14833 912 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 MCMDC2Q4G0Z9 681 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 POTEHQ6S545 545 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 TSSK4Q6SA08 328 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 SLC24A5Q71RS6 500 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 GPR149Q86SP6 731 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 CMTR1Q8N1G2 835 aaKnown RBP8.3□□□□□ -1.08
SMG6-205ENST00000570659 HELQQ8TDG4 1101 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 SEPT1Q8WYJ6 367 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 ESR2Q92731 530 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 GLG1Q92896 1179 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 GPATCH3Q96I76 525 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 PGBD1Q96JS3 809 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 SENP7Q9BQF6 1050 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 FTHL17Q9BXU8 183 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 ERAP1Q9NZ08 941 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 FBXL21Q9UKT6 434 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 UBIAD1Q9Y5Z9 338 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 SQORQ9Y6N5 450 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 MYH15Q9Y2K3 1946 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 ASPMQ8IZT6 3477 aa8.3□□□□□ -1.08
SMG6-205ENST00000570659 MIA3Q5JRA6 1907 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.29□□□□□ -1.08
SMG6-205ENST00000570659 F8W810 466 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 RPS6KA5O75582 802 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 RFPL2O75678 378 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 ADRB1P08588 477 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 KLRC1P26715 233 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 PDE1AP54750 535 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 SMC1AQ14683 1233 aaKnown RBP8.29□□□□□ -1.08
SMG6-205ENST00000570659 TPRNQ4KMQ1 711 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 IER5Q5VY09 327 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 CES5AQ6NT32 575 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 RSPH3Q86UC2 560 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 ZNF598Q86UK7 904 aaKnown RBP8.29□□□□□ -1.08
SMG6-205ENST00000570659 VPS52Q8N1B4 723 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 SLC44A3Q8N4M1 653 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 LPPQ93052 612 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 ZNF558Q96NG5 402 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 NECTIN4Q96NY8 510 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 RTP3Q9BQQ7 232 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 MYL10Q9BUA6 226 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 TMEM117Q9H0C3 514 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 NGRNQ9NPE2 291 aaKnown RBP8.29□□□□□ -1.08
SMG6-205ENST00000570659 TMEM161AQ9NX61 479 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 SPG21Q9NZD8 308 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 DNAJB4Q9UDY4 337 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 USTQ9Y2C2 406 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 WDR81Q562E7 1941 aa8.29□□□□□ -1.08
SMG6-205ENST00000570659 SMIM35A0A1B0GVV1 85 aa8.28□□□□□ -1.08
SMG6-205ENST00000570659 DENND3A2RUS2 1198 aa8.28□□□□□ -1.08
SMG6-205ENST00000570659 NRG2O14511 850 aaPredicted RBP8.28□□□□□ -1.08
SMG6-205ENST00000570659 LILRB3O75022 631 aa8.28□□□□□ -1.08
SMG6-205ENST00000570659 C22orf31O95567 290 aa8.28□□□□□ -1.08
SMG6-205ENST00000570659 CD72P21854 359 aa8.28□□□□□ -1.08
SMG6-205ENST00000570659 CA8P35219 290 aa8.28□□□□□ -1.08
SMG6-205ENST00000570659 BCAR1P56945 870 aa8.28□□□□□ -1.08
SMG6-205ENST00000570659 ANTXR2P58335 489 aa8.28□□□□□ -1.08
SMG6-205ENST00000570659 ACTR2P61160 394 aa8.28□□□□□ -1.08
SMG6-205ENST00000570659 PTPN14Q15678 1187 aa8.28□□□□□ -1.08
SMG6-205ENST00000570659 LPAL2Q16609 132 aa8.28□□□□□ -1.08
SMG6-205ENST00000570659 GNPTABQ3T906 1256 aa8.28□□□□□ -1.08
SMG6-205ENST00000570659 ATAT1Q5SQI0 421 aa8.28□□□□□ -1.08
SMG6-205ENST00000570659 PDE12Q6L8Q7 609 aaKnown RBP8.28□□□□□ -1.08
SMG6-205ENST00000570659 TAS1R1Q7RTX1 841 aa8.28□□□□□ -1.08
SMG6-205ENST00000570659 ECHDC2Q86YB7 292 aa8.28□□□□□ -1.08
SMG6-205ENST00000570659 C1orf210Q8IVY1 113 aa8.28□□□□□ -1.08
SMG6-205ENST00000570659 CCDC60Q8IWA6 550 aaPredicted RBP8.28□□□□□ -1.08
SMG6-205ENST00000570659 RNF169Q8NCN4 708 aa8.28□□□□□ -1.08
SMG6-205ENST00000570659 ZNF707Q96C28 371 aaPredicted RBP8.28□□□□□ -1.08
SMG6-205ENST00000570659 EVI5LQ96CN4 794 aa8.28□□□□□ -1.08
SMG6-205ENST00000570659 SMARCAD1Q9H4L7 1026 aa8.28□□□□□ -1.08
SMG6-205ENST00000570659 ATP6V0A4Q9HBG4 840 aa8.28□□□□□ -1.08
SMG6-205ENST00000570659 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.28□□□□□ -1.08
SMG6-205ENST00000570659 CEP295Q9C0D2 2601 aa8.28□□□□□ -1.08
SMG6-205ENST00000570659 NOTCH4Q99466 2003 aa8.27□□□□□ -1.09
SMG6-205ENST00000570659 AKAP13Q12802 2813 aa8.27□□□□□ -1.09
SMG6-205ENST00000570659 FAM208BQ5VWN6 2430 aa8.27□□□□□ -1.09
SMG6-205ENST00000570659 PNMA6FA0A0J9YX94 578 aa8.27□□□□□ -1.09
SMG6-205ENST00000570659 GDF9O60383 454 aa8.27□□□□□ -1.09
SMG6-205ENST00000570659 PLEKHA8P1O95397 391 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms