RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 PABPC5Q96DU9 382 aaKnown RBP10.06□□□□□ -0.8
NPLOC4-204ENST00000570324 NAP1L4Q99733 375 aaKnown RBP10.06□□□□□ -0.8
NPLOC4-204ENST00000570324 IGFLR1Q9H665 355 aa10.06□□□□□ -0.8
NPLOC4-204ENST00000570324 ATP6V0A4Q9HBG4 840 aa10.06□□□□□ -0.8
NPLOC4-204ENST00000570324 BRMS1Q9HCU9 246 aa10.06□□□□□ -0.8
NPLOC4-204ENST00000570324 ERVK-5Q9HDB9 667 aa10.06□□□□□ -0.8
NPLOC4-204ENST00000570324 ALG13Q9NP73 1137 aaKnown RBP10.06□□□□□ -0.8
NPLOC4-204ENST00000570324 RGS18Q9NS28 235 aa10.06□□□□□ -0.8
NPLOC4-204ENST00000570324 CLDND1Q9NY35 253 aa10.06□□□□□ -0.8
NPLOC4-204ENST00000570324 SEPT9Q9UHD8 586 aaPredicted RBP10.06□□□□□ -0.8
NPLOC4-204ENST00000570324 DDX25Q9UHL0 483 aaKnown RBP10.06□□□□□ -0.8
NPLOC4-204ENST00000570324 PCDHB12Q9Y5F1 795 aa10.06□□□□□ -0.8
NPLOC4-204ENST00000570324 MRPL42Q9Y6G3 142 aaKnown RBP10.06□□□□□ -0.8
NPLOC4-204ENST00000570324 TTC3P53804 2025 aa10.06□□□□□ -0.8
NPLOC4-204ENST00000570324 CYP3A7-CYP3A51PA0A087WV96 503 aa10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 TBKBP1A7MCY6 615 aa10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 DDX11L8A8MPP1 907 aa10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 GRM6O15303 877 aa10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 PFKFB2O60825 505 aa10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 DKC1O60832 514 aaKnown RBP eCLIP10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 PSMD10O75832 226 aa10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 CYP3A7P24462 503 aa10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 SSTR3P32745 418 aaPredicted RBP10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 LEXMQ3ZCV2 418 aa10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 MTERF2Q49AM1 385 aa10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 XKR3Q5GH77 459 aa10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 PTCRAQ6ISU1 281 aaPredicted RBP10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 MOXD1Q6UVY6 613 aa10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 FAM228AQ86W67 206 aa10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 ABI1Q8IZP0 508 aa10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 MICAL1Q8TDZ2 1067 aa10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 TMEM40Q8WWA1 233 aa10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 NLRP7Q8WX94 980 aa10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 P2RX5Q93086 422 aa10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 GJA10Q969M2 543 aa10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 AIFM3Q96NN9 605 aa10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 C1QTNF1Q9BXJ1 281 aa10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 TMX1Q9H3N1 280 aa10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 STK36Q9NRP7 1315 aa10.05□□□□□ -0.8
NPLOC4-204ENST00000570324 H3BQ06 376 aaPredicted RBP10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 HOXA2O43364 376 aa10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 ZNF862O60290 1169 aa10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 CCNT1O60563 726 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 GPR32O75388 356 aa10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 BAG4O95429 457 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 MMP1P03956 469 aa10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 GCFC2P16383 781 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 EIF4BP23588 611 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 GATMP50440 423 aa10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 AK2P54819 239 aa10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 CDC42EP1Q00587 391 aa10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 TRIM29Q14134 588 aa10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 NEK8Q86SG6 692 aa10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 KLHL23Q8NBE8 558 aa10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 RNF169Q8NCN4 708 aa10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 ZNF668Q96K58 619 aaPredicted RBP10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 JPH2Q9BR39 696 aaPredicted RBP10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 PHF20Q9BVI0 1012 aa10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 GCOM2Q9BZD3 368 aaPredicted RBP10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 RC3H2Q9HBD1 1191 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 TMEM161AQ9NX61 479 aa10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 ORC3Q9UBD5 711 aaPredicted RBP10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 TPCN1Q9ULQ1 816 aa10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 PLAGL2Q9UPG8 496 aa10.04□□□□□ -0.8
NPLOC4-204ENST00000570324 C9IYK1 514 aa10.03□□□□□ -0.8
NPLOC4-204ENST00000570324 EDIL3O43854 480 aa10.03□□□□□ -0.8
NPLOC4-204ENST00000570324 MGEA5O60502 916 aa10.03□□□□□ -0.8
NPLOC4-204ENST00000570324 ITGB1P05556 798 aa10.03□□□□□ -0.8
NPLOC4-204ENST00000570324 IL9P15248 144 aa10.03□□□□□ -0.8
NPLOC4-204ENST00000570324 KRT2P35908 639 aa10.03□□□□□ -0.8
NPLOC4-204ENST00000570324 GPC3P51654 580 aa10.03□□□□□ -0.8
NPLOC4-204ENST00000570324 NEK4P51957 841 aa10.03□□□□□ -0.8
NPLOC4-204ENST00000570324 PSMC5P62195 406 aa10.03□□□□□ -0.8
NPLOC4-204ENST00000570324 UGCGQ16739 394 aa10.03□□□□□ -0.8
NPLOC4-204ENST00000570324 CSPP1Q1MSJ5 1256 aa10.03□□□□□ -0.8
NPLOC4-204ENST00000570324 FAM102BQ5T8I3 360 aa10.03□□□□□ -0.8
NPLOC4-204ENST00000570324 PIK3AP1Q6ZUJ8 805 aa10.03□□□□□ -0.8
NPLOC4-204ENST00000570324 THNSL1Q8IYQ7 743 aa10.03□□□□□ -0.8
NPLOC4-204ENST00000570324 POF1BQ8WVV4 589 aa10.03□□□□□ -0.8
NPLOC4-204ENST00000570324 FAM20AQ96MK3 541 aa10.03□□□□□ -0.8
NPLOC4-204ENST00000570324 MBOAT7Q96N66 472 aa10.03□□□□□ -0.8
NPLOC4-204ENST00000570324 NIFKQ9BYG3 293 aaKnown RBP10.03□□□□□ -0.8
NPLOC4-204ENST00000570324 INO80BQ9C086 356 aaPredicted RBP10.03□□□□□ -0.8
NPLOC4-204ENST00000570324 CDH23Q9H251 3354 aa10.03□□□□□ -0.8
NPLOC4-204ENST00000570324 ELAC1Q9H777 363 aaKnown RBP10.03□□□□□ -0.8
NPLOC4-204ENST00000570324 DACT1Q9NYF0 836 aa10.03□□□□□ -0.8
NPLOC4-204ENST00000570324 WDR81Q562E7 1941 aa10.03□□□□□ -0.8
NPLOC4-204ENST00000570324 CHD9Q3L8U1 2897 aa10.02□□□□□ -0.8
NPLOC4-204ENST00000570324 GRXCR2A6NFK2 248 aa10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 M0R2N6 131 aa10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 FGFR1P11362 822 aa10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 DARSP14868 501 aaKnown RBP10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 LAG3P18627 525 aa10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 COL9A1P20849 921 aa10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 SFPQP23246 707 aaKnown RBP eCLIP10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 QARSP47897 775 aaKnown RBP10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 NDUFV1P49821 464 aa10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 UBE3AQ05086 875 aa10.02□□□□□ -0.81
NPLOC4-204ENST00000570324 HYAL1Q12794 435 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms