RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 ST13P50502 369 aaKnown RBP7.27□□□□□ -1.25
SMG1-217ENST00000569764 CDR1P51861 262 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 HMGCS2P54868 508 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 MLC1Q15049 377 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 PRAMEF18Q5VWM3 479 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 FAM160B1Q5W0V3 765 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 SLFN13Q68D06 897 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 RNF214Q8ND24 703 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 DEFB118Q96PH6 123 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 SAP30BPQ9UHR5 308 aaKnown RBP7.27□□□□□ -1.25
SMG1-217ENST00000569764 PTPN22Q9Y2R2 807 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 MYH7P12883 1935 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 AKR1B15C9JRZ8 316 aaPredicted RBP7.27□□□□□ -1.25
SMG1-217ENST00000569764 PARP1P09874 1014 aaKnown RBP7.27□□□□□ -1.25
SMG1-217ENST00000569764 MYBP10242 640 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 BMP3P12645 472 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 AP2B1P63010 937 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 MCL1Q07820 350 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 CUL4AQ13619 759 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 UBE3CQ15386 1083 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 SMAD1Q15797 465 aaKnown RBP7.27□□□□□ -1.25
SMG1-217ENST00000569764 STOX1Q6ZVD7 989 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 RRP36Q96EU6 259 aaKnown RBP7.27□□□□□ -1.25
SMG1-217ENST00000569764 FAM84BQ96KN1 310 aaPredicted RBP7.27□□□□□ -1.25
SMG1-217ENST00000569764 FAM193BQ96PV7 902 aaPredicted RBP7.27□□□□□ -1.25
SMG1-217ENST00000569764 PFKMP08237 780 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 CCNCP24863 283 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 NOP2P46087 812 aaKnown RBP7.27□□□□□ -1.25
SMG1-217ENST00000569764 TPD52P55327 224 aaPredicted RBP7.27□□□□□ -1.25
SMG1-217ENST00000569764 ITKQ08881 620 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 AP1B1Q10567 949 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 SHROOM1Q2M3G4 852 aaPredicted RBP7.27□□□□□ -1.25
SMG1-217ENST00000569764 CREB3L3Q68CJ9 461 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 TRIM7Q9C029 511 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.27□□□□□ -1.25
SMG1-217ENST00000569764 DMTF1Q9Y222 760 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 ARIH2O95376 493 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 TTLL1O95922 423 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 TOP1P11387 765 aaKnown RBP7.26□□□□□ -1.25
SMG1-217ENST00000569764 ALAS1P13196 640 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 CYP11B2P19099 503 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 CLCN2P51788 898 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 BACE1P56817 501 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 RASA2Q15283 850 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 QPCTQ16769 361 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 FILIP1LQ4L180 1135 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 RELTQ969Z4 430 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 DNAJC7Q99615 494 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 WDR18Q9BV38 432 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 KRT82Q9NSB4 513 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 CCPG1Q9ULG6 757 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 C4BP0C0L5 1744 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 ENPP3O14638 875 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 PCNAP12004 261 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 GRK2P25098 689 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 POLR2BP30876 1174 aaKnown RBP7.26□□□□□ -1.25
SMG1-217ENST00000569764 ITIH3Q06033 890 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 PLEKHG4Q58EX7 1191 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 XRRA1Q6P2D8 792 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 CYP26C1Q6V0L0 522 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 PACS1Q6VY07 963 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 ANKRD13CQ8N6S4 541 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 DEPDC7Q96QD5 511 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 SDF4Q9BRK5 362 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 IDI2Q9BXS1 227 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 ST7Q9NRC1 585 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 BMP2KQ9NSY1 1161 aaPredicted RBP7.26□□□□□ -1.25
SMG1-217ENST00000569764 DAGLAQ9Y4D2 1042 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 BRWD3Q6RI45 1802 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 FRMD3A2A2Y4 597 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 M0R2C6 588 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 E2F6O75461 281 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 EPN2O95208 641 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 ITGBL1O95965 494 aaPredicted RBP7.26□□□□□ -1.25
SMG1-217ENST00000569764 SLC45A4Q5BKX6 768 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 NOL9Q5SY16 702 aaKnown RBP7.26□□□□□ -1.25
SMG1-217ENST00000569764 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.26□□□□□ -1.25
SMG1-217ENST00000569764 GAS2L3Q86XJ1 694 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 FAM114A1Q8IWE2 563 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 ANKRD20A12PQ8NF67 263 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 FERMT2Q96AC1 680 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 ASB16Q96NS5 453 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 MAK16Q9BXY0 300 aaKnown RBP7.26□□□□□ -1.25
SMG1-217ENST00000569764 HOOK1Q9UJC3 728 aaKnown RBP7.26□□□□□ -1.25
SMG1-217ENST00000569764 SSX2IPQ9Y2D8 614 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 SALL1Q9NSC2 1324 aa7.26□□□□□ -1.25
SMG1-217ENST00000569764 NEBLO76041 1014 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 CCL5P13501 91 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 MCAMP43121 646 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 STAT2P52630 851 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 NLRP12P59046 1061 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 NFKB2Q00653 900 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 TAF12Q16514 161 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 NAIF1Q69YI7 327 aaPredicted RBP7.25□□□□□ -1.25
SMG1-217ENST00000569764 OTOP1Q7RTM1 612 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 TPH2Q8IWU9 490 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 NECAB1Q8N987 351 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 ERMNQ8TAM6 284 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 TRIM63Q969Q1 353 aa7.25□□□□□ -1.25
SMG1-217ENST00000569764 OSBP2Q969R2 916 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms