RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 PAPD7Q5XG87 772 aaKnown RBP5.92□□□□□ -1.46
SF3B3-213ENST00000569687 PDXDC1Q6P996 788 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 STXBP4Q6ZWJ1 553 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 SND1Q7KZF4 910 aaKnown RBP eCLIP5.92□□□□□ -1.46
SF3B3-213ENST00000569687 SRGAP1Q7Z6B7 1085 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 VSIG10LQ86VR7 867 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 SFR1Q86XK3 245 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 SLC9A9Q8IVB4 645 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 TPH2Q8IWU9 490 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 SLC35F6Q8N357 371 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 TXLNBQ8N3L3 684 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 RNF10Q8N5U6 811 aaKnown RBP5.92□□□□□ -1.46
SF3B3-213ENST00000569687 GPR161Q8N6U8 529 aaKnown RBP5.92□□□□□ -1.46
SF3B3-213ENST00000569687 CEP112Q8N8E3 955 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 ZNF280CQ8ND82 737 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 MNS1Q8NEH6 495 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 REPS2Q8NFH8 660 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 NEK11Q8NG66 645 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 GOLGA5Q8TBA6 731 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 LRRN4Q8WUT4 740 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 EEF2KMTQ96G04 330 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 CCDC42Q96M95 316 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 TAAR1Q96RJ0 339 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 UIMC1Q96RL1 719 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 UCN2Q96RP3 112 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 FIZ1Q96SL8 496 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 NAPGQ99747 312 aaPredicted RBP5.92□□□□□ -1.46
SF3B3-213ENST00000569687 CARD6Q9BX69 1037 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 TSGA10Q9BZW7 698 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 ST6GALNAC4Q9H4F1 302 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 ZSWIM4Q9H7M6 989 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 MMRN2Q9H8L6 949 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 PARVGQ9HBI0 331 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 LZTFL1Q9NQ48 299 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 HOXC10Q9NYD6 342 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 GPRC5DQ9NZD1 345 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 TBC1D7Q9P0N9 293 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 RNF181Q9P0P0 153 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 CEP72Q9P209 647 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 COL20A1Q9P218 1284 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 ARHGAP20Q9P2F6 1191 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.92□□□□□ -1.46
SF3B3-213ENST00000569687 ARMCX3Q9UH62 379 aaPredicted RBP5.92□□□□□ -1.46
SF3B3-213ENST00000569687 PCDHGC3Q9UN70 934 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 DAAM1Q9Y4D1 1078 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.92□□□□□ -1.46
SF3B3-213ENST00000569687 BZW2Q9Y6E2 419 aaKnown RBP5.92□□□□□ -1.46
SF3B3-213ENST00000569687 MYPNQ86TC9 1320 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 SBF1O95248 1867 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 A0A0U1RQJ8 604 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 NFIBO00712 420 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 EPHB6O15197 1021 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 HOXA2O43364 376 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 USO1O60763 962 aaKnown RBP5.91□□□□□ -1.46
SF3B3-213ENST00000569687 TBCAO75347 108 aaKnown RBP5.91□□□□□ -1.46
SF3B3-213ENST00000569687 STAM2O75886 525 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 FLOT1O75955 427 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 PRPF6O94906 941 aaKnown RBP5.91□□□□□ -1.46
SF3B3-213ENST00000569687 FAM13AO94988 1023 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 ATG7O95352 703 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 IPO7O95373 1038 aaKnown RBP5.91□□□□□ -1.46
SF3B3-213ENST00000569687 ABL1P00519 1130 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 AFPP02771 609 aaKnown RBP5.91□□□□□ -1.46
SF3B3-213ENST00000569687 NR3C1P04150 777 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 SERPING1P05155 500 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 MYBP10242 640 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 C7P10643 843 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 ALAS1P13196 640 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 VCAM1P19320 739 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 NR2F2P24468 414 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 SFNP31947 248 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 EIF4A3P38919 411 aaKnown RBP5.91□□□□□ -1.46
SF3B3-213ENST00000569687 MAGEA1P43355 309 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 QARSP47897 775 aaKnown RBP5.91□□□□□ -1.46
SF3B3-213ENST00000569687 VAV2P52735 878 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 RPS6P62753 249 aaKnown RBP5.91□□□□□ -1.46
SF3B3-213ENST00000569687 CYP4A11Q02928 519 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 KCNH2Q12809 1159 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 KIF5AQ12840 1032 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 MAPK7Q13164 816 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 ITGB3BPQ13352 177 aaPredicted RBP5.91□□□□□ -1.46
SF3B3-213ENST00000569687 ZYXQ15942 572 aaKnown RBP5.91□□□□□ -1.46
SF3B3-213ENST00000569687 TBC1D10BQ4KMP7 808 aaPredicted RBP5.91□□□□□ -1.46
SF3B3-213ENST00000569687 CCDC122Q5T0U0 273 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 C10orf76Q5T2E6 689 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 KLHDC7AQ5VTJ3 777 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 C9orf131Q5VYM1 1079 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 HGSNATQ68CP4 663 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 CATSPERGQ6ZRH7 1159 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 RRAGAQ7L523 313 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 TRAPPC11Q7Z392 1133 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 MIER3Q7Z3K6 550 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 NELFCDQ8IXH7 590 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 C12orf56Q8IXR9 622 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 C4orf19Q8IY42 314 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 MYCT1Q8N699 235 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 LRRN4CLQ8ND94 238 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 SLC17A8Q8NDX2 589 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 PRR7Q8TB68 274 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 EPS8L1Q8TE68 723 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms