RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 NOSTRINQ8IVI9 506 aa7.03□□□□□ -1.28
CAPN3-218ENST00000568153 FAM20CQ8IXL6 584 aa7.03□□□□□ -1.28
CAPN3-218ENST00000568153 RHOVQ96L33 236 aa7.03□□□□□ -1.28
CAPN3-218ENST00000568153 TMEM74Q96NL1 305 aa7.03□□□□□ -1.28
CAPN3-218ENST00000568153 PHF20Q9BVI0 1012 aa7.03□□□□□ -1.28
CAPN3-218ENST00000568153 VEZTQ9HBM0 779 aa7.03□□□□□ -1.28
CAPN3-218ENST00000568153 VAT1LQ9HCJ6 419 aa7.03□□□□□ -1.28
CAPN3-218ENST00000568153 SH3GLB2Q9NR46 395 aa7.03□□□□□ -1.28
CAPN3-218ENST00000568153 METTL5Q9NRN9 209 aaKnown RBP7.03□□□□□ -1.28
CAPN3-218ENST00000568153 CRIM1Q9NZV1 1036 aa7.03□□□□□ -1.28
CAPN3-218ENST00000568153 NYAP2Q9P242 653 aa7.03□□□□□ -1.28
CAPN3-218ENST00000568153 KCNJ14Q9UNX9 436 aa7.03□□□□□ -1.28
CAPN3-218ENST00000568153 LTBP1Q14766 1721 aa7.03□□□□□ -1.28
CAPN3-218ENST00000568153 MYH7P12883 1935 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 hCG_1642624A0A1W2PR95 340 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 GOLGA6L3A6NEY3 463 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 KIF28PB7ZC32 967 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 UBE2Q2LH0YL09 131 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 WNT10BO00744 389 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 SPTLC2O15270 562 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 GAS2O43903 313 aaKnown RBP7.02□□□□□ -1.29
CAPN3-218ENST00000568153 YEATS4O95619 227 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 GOLGA8HP0CJ92 632 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 BMP3P12645 472 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 EEF2P13639 858 aaKnown RBP7.02□□□□□ -1.29
CAPN3-218ENST00000568153 LMNB1P20700 586 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 CALML3P27482 149 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 KRT2P35908 639 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 ME1P48163 572 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 ID3Q02535 119 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 TNFAIP1Q13829 316 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 SLC39A14Q15043 492 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 STK38Q15208 465 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 NBPF9Q3BBW0 867 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 ZSCAN23Q3MJ62 389 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 ASPRV1Q53RT3 343 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 SGO2Q562F6 1265 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 ZC3H12AQ5D1E8 599 aaKnown RBP7.02□□□□□ -1.29
CAPN3-218ENST00000568153 ANO1Q5XXA6 986 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 GALNT17Q6IS24 598 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 DYMQ7RTS9 669 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 TRIM42Q8IWZ5 723 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 DIS3L2Q8IYB7 885 aaKnown RBP7.02□□□□□ -1.29
CAPN3-218ENST00000568153 FAM177A1Q8N128 213 aaPredicted RBP7.02□□□□□ -1.29
CAPN3-218ENST00000568153 JMYQ8N9B5 988 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 LINC00301Q8NCQ3 95 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 KCNG4Q8TDN1 519 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 PIBF1Q8WXW3 757 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 RRP36Q96EU6 259 aaKnown RBP7.02□□□□□ -1.29
CAPN3-218ENST00000568153 FANCD2OSQ96PS1 177 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 USP28Q96RU2 1077 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 SYT17Q9BSW7 474 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 SPZ1Q9BXG8 430 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 MIR1-1HGQ9H1L0 117 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 GSX1Q9H4S2 264 aaPredicted RBP7.02□□□□□ -1.29
CAPN3-218ENST00000568153 C7orf69Q9H7B7 122 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 FAM105AQ9NUU6 356 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 VPS54Q9P1Q0 977 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 STOML1Q9UBI4 398 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 ISY1Q9ULR0 285 aaKnown RBP7.02□□□□□ -1.29
CAPN3-218ENST00000568153 PCDHA4Q9UN74 947 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 CLIC4Q9Y696 253 aa7.02□□□□□ -1.29
CAPN3-218ENST00000568153 COL11A2P13942 1736 aaPredicted RBP7.01□□□□□ -1.29
CAPN3-218ENST00000568153 CASZ1Q86V15 1759 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 ATRNL1Q5VV63 1379 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 PLIN4Q96Q06 1357 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 PF4P02776 101 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 SNHG28P0DPA3 235 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 PDHBP11177 359 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 NASPP49321 788 aaPredicted RBP7.01□□□□□ -1.29
CAPN3-218ENST00000568153 PRELPP51888 382 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 ZNF445P59923 1031 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 LMNB2Q03252 620 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 FAM160A1Q05DH4 1040 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 CAMK2GQ13555 558 aaPredicted RBP7.01□□□□□ -1.29
CAPN3-218ENST00000568153 PWP1Q13610 501 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 INPP5AQ14642 412 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 RASA3Q14644 834 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 SEPT2Q15019 361 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 RILPL1Q5EBL4 403 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 GPATCH4Q5T3I0 446 aaKnown RBP7.01□□□□□ -1.29
CAPN3-218ENST00000568153 CCDC183Q5T5S1 534 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 XP32Q5T750 250 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 L1TD1Q5T7N2 865 aaKnown RBP7.01□□□□□ -1.29
CAPN3-218ENST00000568153 SLFN13Q68D06 897 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 ADALQ6DHV7 355 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 CDPF1Q6NVV7 123 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 SIAH1Q8IUQ4 282 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 CCAR1Q8IX12 1150 aaKnown RBP7.01□□□□□ -1.29
CAPN3-218ENST00000568153 BICD2Q8TD16 824 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 CCDC12Q8WUD4 166 aaPredicted RBP7.01□□□□□ -1.29
CAPN3-218ENST00000568153 RNF34Q969K3 372 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 PGBD1Q96JS3 809 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 UBA5Q9GZZ9 404 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 RIOX1Q9H6W3 641 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 DNAJC18Q9H819 358 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 DISC1Q9NRI5 854 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 SEC63Q9UGP8 760 aaKnown RBP7.01□□□□□ -1.29
CAPN3-218ENST00000568153 PCDHA7Q9UN72 937 aa7.01□□□□□ -1.29
CAPN3-218ENST00000568153 CEP131Q9UPN4 1083 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms