RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 HOXA13P31271 388 aaPredicted RBP8.85□□□□□ -0.99
SMG1-214ENST00000568038 ADCY7P51828 1080 aa8.85□□□□□ -0.99
SMG1-214ENST00000568038 MAP2K1Q02750 393 aaPredicted RBP8.85□□□□□ -0.99
SMG1-214ENST00000568038 DNM1Q05193 864 aaKnown RBP8.85□□□□□ -0.99
SMG1-214ENST00000568038 UBE2SQ16763 222 aa8.85□□□□□ -0.99
SMG1-214ENST00000568038 FAM110CQ1W6H9 321 aa8.85□□□□□ -0.99
SMG1-214ENST00000568038 FOXD4L6Q3SYB3 417 aaPredicted RBP8.85□□□□□ -0.99
SMG1-214ENST00000568038 MCTP1Q6DN14 999 aa8.85□□□□□ -0.99
SMG1-214ENST00000568038 TXNDC11Q6PKC3 985 aa8.85□□□□□ -0.99
SMG1-214ENST00000568038 FOXD4L3Q6VB84 417 aaPredicted RBP8.85□□□□□ -0.99
SMG1-214ENST00000568038 CHST13Q8NET6 341 aa8.85□□□□□ -0.99
SMG1-214ENST00000568038 FBXO18Q8NFZ0 1043 aa8.85□□□□□ -0.99
SMG1-214ENST00000568038 CLEC4DQ8WXI8 215 aa8.85□□□□□ -0.99
SMG1-214ENST00000568038 FOXD4L4Q8WXT5 416 aaPredicted RBP8.85□□□□□ -0.99
SMG1-214ENST00000568038 EDEM1Q92611 657 aa8.85□□□□□ -0.99
SMG1-214ENST00000568038 PHF20Q9BVI0 1012 aa8.85□□□□□ -0.99
SMG1-214ENST00000568038 SSBP4Q9BWG4 385 aaPredicted RBP8.85□□□□□ -0.99
SMG1-214ENST00000568038 ZMYND12Q9H0C1 365 aa8.85□□□□□ -0.99
SMG1-214ENST00000568038 RASSF4Q9H2L5 321 aa8.85□□□□□ -0.99
SMG1-214ENST00000568038 ACAD9Q9H845 621 aa8.85□□□□□ -0.99
SMG1-214ENST00000568038 PSTPIP2Q9H939 334 aa8.85□□□□□ -0.99
SMG1-214ENST00000568038 C6orf50Q9HD87 102 aa8.85□□□□□ -0.99
SMG1-214ENST00000568038 PPME1Q9Y570 386 aa8.85□□□□□ -0.99
SMG1-214ENST00000568038 A0A0G2JMZ2 1700 aa8.84□□□□□ -0.99
SMG1-214ENST00000568038 ESYT2A0FGR8 921 aa8.84□□□□□ -0.99
SMG1-214ENST00000568038 GCOM1H8Y6P7 765 aaPredicted RBP8.84□□□□□ -0.99
SMG1-214ENST00000568038 STX6O43752 255 aa8.84□□□□□ -0.99
SMG1-214ENST00000568038 SMNDC1O75940 238 aaKnown RBP eCLIP8.84□□□□□ -0.99
SMG1-214ENST00000568038 MMP1P03956 469 aa8.84□□□□□ -0.99
SMG1-214ENST00000568038 POLR2MP0CAP2 368 aa8.84□□□□□ -0.99
SMG1-214ENST00000568038 CALML3P27482 149 aa8.84□□□□□ -0.99
SMG1-214ENST00000568038 GNA11P29992 359 aa8.84□□□□□ -0.99
SMG1-214ENST00000568038 COPB2P35606 906 aa8.84□□□□□ -0.99
SMG1-214ENST00000568038 MRPL12P52815 198 aaKnown RBP8.84□□□□□ -0.99
SMG1-214ENST00000568038 SETDB1Q15047 1291 aa8.84□□□□□ -0.99
SMG1-214ENST00000568038 SAFBQ15424 915 aaKnown RBP eCLIP8.84□□□□□ -0.99
SMG1-214ENST00000568038 USP17L6PQ6QN14 398 aa8.84□□□□□ -0.99
SMG1-214ENST00000568038 ZNF438Q7Z4V0 828 aa8.84□□□□□ -0.99
SMG1-214ENST00000568038 MCF2L2Q86YR7 1114 aa8.84□□□□□ -0.99
SMG1-214ENST00000568038 BLIDQ8IZY5 108 aa8.84□□□□□ -0.99
SMG1-214ENST00000568038 SHCBP1Q8NEM2 672 aa8.84□□□□□ -0.99
SMG1-214ENST00000568038 RASGRP4Q8TDF6 673 aa8.84□□□□□ -0.99
SMG1-214ENST00000568038 CUL5Q93034 780 aa8.84□□□□□ -0.99
SMG1-214ENST00000568038 MEGF10Q96KG7 1140 aa8.84□□□□□ -0.99
SMG1-214ENST00000568038 AKTIPQ9H8T0 292 aa8.84□□□□□ -0.99
SMG1-214ENST00000568038 RIC8AQ9NPQ8 531 aa8.84□□□□□ -0.99
SMG1-214ENST00000568038 TMEM260Q9NX78 707 aa8.84□□□□□ -0.99
SMG1-214ENST00000568038 TMEM63CQ9P1W3 806 aa8.84□□□□□ -0.99
SMG1-214ENST00000568038 BIN2Q9UBW5 565 aaPredicted RBP8.84□□□□□ -0.99
SMG1-214ENST00000568038 FBXO40Q9UH90 709 aa8.84□□□□□ -0.99
SMG1-214ENST00000568038 PCDHA4Q9UN74 947 aa8.84□□□□□ -0.99
SMG1-214ENST00000568038 BTBD18B2RXH4 712 aa8.83□□□□□ -1
SMG1-214ENST00000568038 FCER1AP12319 257 aa8.83□□□□□ -1
SMG1-214ENST00000568038 MAPK4P31152 587 aa8.83□□□□□ -1
SMG1-214ENST00000568038 KRT2P35908 639 aa8.83□□□□□ -1
SMG1-214ENST00000568038 SP3Q02447 781 aa8.83□□□□□ -1
SMG1-214ENST00000568038 GNL2Q13823 731 aaKnown RBP8.83□□□□□ -1
SMG1-214ENST00000568038 PKP1Q13835 747 aa8.83□□□□□ -1
SMG1-214ENST00000568038 BAATQ14032 418 aaPredicted RBP8.83□□□□□ -1
SMG1-214ENST00000568038 KCTD2Q14681 263 aa8.83□□□□□ -1
SMG1-214ENST00000568038 NPY5RQ15761 445 aa8.83□□□□□ -1
SMG1-214ENST00000568038 JAKMIP3Q5VZ66 844 aa8.83□□□□□ -1
SMG1-214ENST00000568038 GALNT17Q6IS24 598 aa8.83□□□□□ -1
SMG1-214ENST00000568038 SLC30A10Q6XR72 485 aa8.83□□□□□ -1
SMG1-214ENST00000568038 RNF207Q6ZRF8 634 aa8.83□□□□□ -1
SMG1-214ENST00000568038 GPR142Q7Z601 462 aa8.83□□□□□ -1
SMG1-214ENST00000568038 FERMT3Q86UX7 667 aa8.83□□□□□ -1
SMG1-214ENST00000568038 DIS3L2Q8IYB7 885 aaKnown RBP8.83□□□□□ -1
SMG1-214ENST00000568038 FAM177A1Q8N128 213 aaPredicted RBP8.83□□□□□ -1
SMG1-214ENST00000568038 ANKRD35Q8N283 1001 aa8.83□□□□□ -1
SMG1-214ENST00000568038 DAGLBQ8NCG7 672 aa8.83□□□□□ -1
SMG1-214ENST00000568038 TTC16Q8NEE8 873 aa8.83□□□□□ -1
SMG1-214ENST00000568038 BICD2Q8TD16 824 aa8.83□□□□□ -1
SMG1-214ENST00000568038 PGBD1Q96JS3 809 aa8.83□□□□□ -1
SMG1-214ENST00000568038 MMP19Q99542 508 aa8.83□□□□□ -1
SMG1-214ENST00000568038 MRPL18Q9H0U6 180 aaKnown RBP8.83□□□□□ -1
SMG1-214ENST00000568038 MROH8Q9H579 483 aa8.83□□□□□ -1
SMG1-214ENST00000568038 BRMS1Q9HCU9 246 aa8.83□□□□□ -1
SMG1-214ENST00000568038 A1CFQ9NQ94 594 aaKnown RBP8.83□□□□□ -1
SMG1-214ENST00000568038 KANSL3Q9P2N6 904 aa8.83□□□□□ -1
SMG1-214ENST00000568038 PCDHA6Q9UN73 950 aa8.83□□□□□ -1
SMG1-214ENST00000568038 MTMR6Q9Y217 621 aa8.83□□□□□ -1
SMG1-214ENST00000568038 PCDHA8Q9Y5H6 950 aa8.83□□□□□ -1
SMG1-214ENST00000568038 IVNS1ABPQ9Y6Y0 642 aa8.83□□□□□ -1
SMG1-214ENST00000568038 THSD7BQ9C0I4 1608 aa8.83□□□□□ -1
SMG1-214ENST00000568038 KIF28PB7ZC32 967 aa8.82□□□□□ -1
SMG1-214ENST00000568038 MEIS2O14770 477 aa8.82□□□□□ -1
SMG1-214ENST00000568038 PGK2P07205 417 aa8.82□□□□□ -1
SMG1-214ENST00000568038 DDIT3P35638 169 aa8.82□□□□□ -1
SMG1-214ENST00000568038 PSMC4P43686 418 aa8.82□□□□□ -1
SMG1-214ENST00000568038 HSD17B4P51659 736 aa8.82□□□□□ -1
SMG1-214ENST00000568038 RPS6P62753 249 aaKnown RBP8.82□□□□□ -1
SMG1-214ENST00000568038 LACTBP83111 547 aaPredicted RBP8.82□□□□□ -1
SMG1-214ENST00000568038 MTMR3Q13615 1198 aa8.82□□□□□ -1
SMG1-214ENST00000568038 NOM1Q5C9Z4 860 aaKnown RBP8.82□□□□□ -1
SMG1-214ENST00000568038 PLEKHH3Q7Z736 793 aa8.82□□□□□ -1
SMG1-214ENST00000568038 REXO1Q8N1G1 1221 aaKnown RBP8.82□□□□□ -1
SMG1-214ENST00000568038 RGS22Q8NE09 1264 aa8.82□□□□□ -1
SMG1-214ENST00000568038 HELQQ8TDG4 1101 aa8.82□□□□□ -1
SMG1-214ENST00000568038 SYTL5Q8TDW5 730 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms