RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 BTN2A2Q8WVV5 523 aa6.35□□□□□ -1.39
CAPN3-217ENST00000567817 LTV1Q96GA3 475 aaPredicted RBP6.35□□□□□ -1.39
CAPN3-217ENST00000567817 MMP19Q99542 508 aa6.35□□□□□ -1.39
CAPN3-217ENST00000567817 LRP2BPQ9P2M1 347 aa6.35□□□□□ -1.39
CAPN3-217ENST00000567817 SMG5Q9UPR3 1016 aaKnown RBP6.35□□□□□ -1.39
CAPN3-217ENST00000567817 SCN4AP35499 1836 aa6.34□□□□□ -1.39
CAPN3-217ENST00000567817 AOX1Q06278 1338 aa6.34□□□□□ -1.39
CAPN3-217ENST00000567817 WDR33Q9C0J8 1336 aaKnown RBP6.34□□□□□ -1.39
CAPN3-217ENST00000567817 NPIPB6E9PJ23 425 aa6.34□□□□□ -1.39
CAPN3-217ENST00000567817 AGRPO00253 132 aa6.34□□□□□ -1.39
CAPN3-217ENST00000567817 CYP27B1O15528 508 aa6.34□□□□□ -1.39
CAPN3-217ENST00000567817 THBDP07204 575 aa6.34□□□□□ -1.39
CAPN3-217ENST00000567817 HSP90AA1P07900 732 aaKnown RBP6.34□□□□□ -1.39
CAPN3-217ENST00000567817 FBLN1P23142 703 aa6.34□□□□□ -1.39
CAPN3-217ENST00000567817 MAPKAPK2P49137 400 aa6.34□□□□□ -1.39
CAPN3-217ENST00000567817 LINC00310P59036 64 aa6.34□□□□□ -1.39
CAPN3-217ENST00000567817 NUCB2P80303 420 aa6.34□□□□□ -1.39
CAPN3-217ENST00000567817 ITPK1Q13572 414 aa6.34□□□□□ -1.39
CAPN3-217ENST00000567817 SLC10A6Q3KNW5 377 aa6.34□□□□□ -1.39
CAPN3-217ENST00000567817 PLEKHN1Q494U1 663 aaPredicted RBP6.34□□□□□ -1.39
CAPN3-217ENST00000567817 BICRALQ6AI39 1079 aa6.34□□□□□ -1.39
CAPN3-217ENST00000567817 TMC6Q7Z403 805 aa6.34□□□□□ -1.39
CAPN3-217ENST00000567817 CABP7Q86V35 215 aa6.34□□□□□ -1.39
CAPN3-217ENST00000567817 PNMA8AQ86V59 439 aaPredicted RBP6.34□□□□□ -1.39
CAPN3-217ENST00000567817 CPNE8Q86YQ8 564 aa6.34□□□□□ -1.39
CAPN3-217ENST00000567817 TTLL6Q8N841 843 aa6.34□□□□□ -1.39
CAPN3-217ENST00000567817 ZSCAN18Q8TBC5 510 aaPredicted RBP6.34□□□□□ -1.39
CAPN3-217ENST00000567817 LGR4Q9BXB1 951 aa6.34□□□□□ -1.39
CAPN3-217ENST00000567817 CLEC1BQ9P126 229 aa6.34□□□□□ -1.39
CAPN3-217ENST00000567817 DLEC1Q9Y238 1755 aa6.34□□□□□ -1.4
CAPN3-217ENST00000567817 USP42Q9H9J4 1324 aaKnown RBP6.33□□□□□ -1.4
CAPN3-217ENST00000567817 BTBD11A6QL63 1104 aa6.33□□□□□ -1.4
CAPN3-217ENST00000567817 ELL2O00472 640 aaPredicted RBP6.33□□□□□ -1.4
CAPN3-217ENST00000567817 N4BP3O15049 544 aa6.33□□□□□ -1.4
CAPN3-217ENST00000567817 NPHS1O60500 1241 aa6.33□□□□□ -1.4
CAPN3-217ENST00000567817 STK10O94804 968 aaKnown RBP6.33□□□□□ -1.4
CAPN3-217ENST00000567817 SCG5P05408 212 aa6.33□□□□□ -1.4
CAPN3-217ENST00000567817 PLS3P13797 630 aa6.33□□□□□ -1.4
CAPN3-217ENST00000567817 MCCP23508 829 aa6.33□□□□□ -1.4
CAPN3-217ENST00000567817 TACR1P25103 407 aa6.33□□□□□ -1.4
CAPN3-217ENST00000567817 HOXC12P31275 282 aa6.33□□□□□ -1.4
CAPN3-217ENST00000567817 DDIT3P35638 169 aa6.33□□□□□ -1.4
CAPN3-217ENST00000567817 MAP2K2P36507 400 aa6.33□□□□□ -1.4
CAPN3-217ENST00000567817 RAB33AQ14088 237 aa6.33□□□□□ -1.4
CAPN3-217ENST00000567817 MTHFSDQ2M296 383 aaKnown RBP6.33□□□□□ -1.4
CAPN3-217ENST00000567817 SOGA3Q5TF21 947 aa6.33□□□□□ -1.4
CAPN3-217ENST00000567817 NBPF6Q5VWK0 638 aa6.33□□□□□ -1.4
CAPN3-217ENST00000567817 E4F1Q66K89 784 aaPredicted RBP6.33□□□□□ -1.4
CAPN3-217ENST00000567817 ZC3H14Q6PJT7 736 aaKnown RBP6.33□□□□□ -1.4
CAPN3-217ENST00000567817 CLEC17AQ6ZS10 378 aa6.33□□□□□ -1.4
CAPN3-217ENST00000567817 C1QL4Q86Z23 238 aa6.33□□□□□ -1.4
CAPN3-217ENST00000567817 LRRC56Q8IYG6 542 aaPredicted RBP6.33□□□□□ -1.4
CAPN3-217ENST00000567817 LZTR1Q8N653 840 aa6.33□□□□□ -1.4
CAPN3-217ENST00000567817 NPLOC4Q8TAT6 608 aa6.33□□□□□ -1.4
CAPN3-217ENST00000567817 NBPF4Q96M43 638 aa6.33□□□□□ -1.4
CAPN3-217ENST00000567817 SGPP1Q9BX95 441 aa6.33□□□□□ -1.4
CAPN3-217ENST00000567817 CNTD2Q9H8S5 307 aa6.33□□□□□ -1.4
CAPN3-217ENST00000567817 COL5A3P25940 1745 aaPredicted RBP6.33□□□□□ -1.4
CAPN3-217ENST00000567817 NCAPD2Q15021 1401 aa6.33□□□□□ -1.4
CAPN3-217ENST00000567817 DICER1Q9UPY3 1922 aaKnown RBP6.33□□□□□ -1.4
CAPN3-217ENST00000567817 IBTKQ9P2D0 1353 aaPredicted RBP6.32□□□□□ -1.4
CAPN3-217ENST00000567817 C7orf72A4D263 438 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 GOLGA6L3A6NEY3 463 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 TBX1O43435 398 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 RAB11FIP3O75154 756 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 CPP00450 1065 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 SNRPB2P08579 225 aaKnown RBP6.32□□□□□ -1.4
CAPN3-217ENST00000567817 GLI4P10075 376 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 CFPP27918 469 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 MRE11P49959 708 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 ANAPC15P60006 121 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 CYP4F3Q08477 520 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 DCTN1Q14203 1278 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 TAF7Q15545 349 aaPredicted RBP6.32□□□□□ -1.4
CAPN3-217ENST00000567817 AMOTQ4VCS5 1084 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 HSP90AB4PQ58FF6 505 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 IQCEQ6IPM2 695 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 SMIM5Q71RC9 77 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 MCM10Q7L590 875 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 CKAP2LQ8IYA6 745 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 NETO2Q8NC67 525 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 FRS2Q8WU20 508 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 SIGLEC10Q96LC7 697 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 CCDC140Q96MF4 163 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 MTA3Q9BTC8 594 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 TRIM55Q9BYV6 548 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 TANGO6Q9C0B7 1094 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 GPRC5CQ9NQ84 441 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 ST7Q9NRC1 585 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.32□□□□□ -1.4
CAPN3-217ENST00000567817 RWDD3Q9Y3V2 267 aa6.32□□□□□ -1.4
CAPN3-217ENST00000567817 H0YIN7 160 aa6.31□□□□□ -1.4
CAPN3-217ENST00000567817 RFXAPO00287 272 aa6.31□□□□□ -1.4
CAPN3-217ENST00000567817 POLRMTO00411 1230 aaKnown RBP6.31□□□□□ -1.4
CAPN3-217ENST00000567817 IRS4O14654 1257 aaPredicted RBP6.31□□□□□ -1.4
CAPN3-217ENST00000567817 ERC2O15083 957 aa6.31□□□□□ -1.4
CAPN3-217ENST00000567817 ATP2B1P20020 1258 aa6.31□□□□□ -1.4
CAPN3-217ENST00000567817 CHRNA5P30532 468 aa6.31□□□□□ -1.4
CAPN3-217ENST00000567817 CDR1P51861 262 aa6.31□□□□□ -1.4
CAPN3-217ENST00000567817 EPHB3P54753 998 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms