RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 C11orf84Q9BUA3 381 aaPredicted RBP12.59□□□□□ -0.39
CDH3-206ENST00000567674 TRAIPQ9BWF2 469 aa12.59□□□□□ -0.39
CDH3-206ENST00000567674 UNC45AQ9H3U1 944 aa12.59□□□□□ -0.39
CDH3-206ENST00000567674 AGO3Q9H9G7 860 aaKnown RBP12.59□□□□□ -0.39
CDH3-206ENST00000567674 C11orf16Q9NQ32 467 aa12.59□□□□□ -0.39
CDH3-206ENST00000567674 CHST12Q9NRB3 414 aa12.59□□□□□ -0.39
CDH3-206ENST00000567674 RGS18Q9NS28 235 aa12.59□□□□□ -0.39
CDH3-206ENST00000567674 PIEZO1Q92508 2521 aa12.59□□□□□ -0.39
CDH3-206ENST00000567674 FSD2A1L4K1 749 aa12.58□□□□□ -0.4
CDH3-206ENST00000567674 ADAMTS3O15072 1205 aa12.58□□□□□ -0.4
CDH3-206ENST00000567674 ASAP2O43150 1006 aa12.58□□□□□ -0.4
CDH3-206ENST00000567674 HOXA2O43364 376 aa12.58□□□□□ -0.4
CDH3-206ENST00000567674 MMP1P03956 469 aa12.58□□□□□ -0.4
CDH3-206ENST00000567674 XRCC6P12956 609 aaKnown RBP eCLIP12.58□□□□□ -0.4
CDH3-206ENST00000567674 FDPSP14324 419 aaKnown RBP12.58□□□□□ -0.4
CDH3-206ENST00000567674 EIF4BP23588 611 aaKnown RBP12.58□□□□□ -0.4
CDH3-206ENST00000567674 BMPR1AP36894 532 aa12.58□□□□□ -0.4
CDH3-206ENST00000567674 SARSP49591 514 aaKnown RBP12.58□□□□□ -0.4
CDH3-206ENST00000567674 TTC3P53804 2025 aa12.58□□□□□ -0.4
CDH3-206ENST00000567674 TBC1D8BQ0IIM8 1120 aa12.58□□□□□ -0.4
CDH3-206ENST00000567674 EPHA7Q15375 998 aa12.58□□□□□ -0.4
CDH3-206ENST00000567674 SAFBQ15424 915 aaKnown RBP eCLIP12.58□□□□□ -0.4
CDH3-206ENST00000567674 INF2Q27J81 1249 aa12.58□□□□□ -0.4
CDH3-206ENST00000567674 LETM2Q2VYF4 491 aa12.58□□□□□ -0.4
CDH3-206ENST00000567674 EPC2Q52LR7 807 aa12.58□□□□□ -0.4
CDH3-206ENST00000567674 EFCAB12Q6NXP0 572 aa12.58□□□□□ -0.4
CDH3-206ENST00000567674 OTUD6AQ7L8S5 288 aa12.58□□□□□ -0.4
CDH3-206ENST00000567674 ZNF410Q86VK4 478 aa12.58□□□□□ -0.4
CDH3-206ENST00000567674 C4orf19Q8IY42 314 aa12.58□□□□□ -0.4
CDH3-206ENST00000567674 TMEM192Q8IY95 271 aa12.58□□□□□ -0.4
CDH3-206ENST00000567674 TNFRSF25Q93038 417 aa12.58□□□□□ -0.4
CDH3-206ENST00000567674 FAM49AQ9H0Q0 323 aaPredicted RBP12.58□□□□□ -0.4
CDH3-206ENST00000567674 ERVK-5Q9HDB9 667 aa12.58□□□□□ -0.4
CDH3-206ENST00000567674 ADGRA3Q8IWK6 1321 aa12.58□□□□□ -0.4
CDH3-206ENST00000567674 MYH9P35579 1960 aaKnown RBP12.58□□□□□ -0.4
CDH3-206ENST00000567674 LCHNA4D1U4 455 aa12.57□□□□□ -0.4
CDH3-206ENST00000567674 ZNF862O60290 1169 aa12.57□□□□□ -0.4
CDH3-206ENST00000567674 CCNT1O60563 726 aaKnown RBP12.57□□□□□ -0.4
CDH3-206ENST00000567674 MAFO75444 373 aaPredicted RBP12.57□□□□□ -0.4
CDH3-206ENST00000567674 LYPLA2O95372 231 aa12.57□□□□□ -0.4
CDH3-206ENST00000567674 SKIP12755 728 aa12.57□□□□□ -0.4
CDH3-206ENST00000567674 MUTP22033 750 aa12.57□□□□□ -0.4
CDH3-206ENST00000567674 CD52P31358 61 aa12.57□□□□□ -0.4
CDH3-206ENST00000567674 PRKCEQ02156 737 aa12.57□□□□□ -0.4
CDH3-206ENST00000567674 PUS10Q3MIT2 529 aaKnown RBP12.57□□□□□ -0.4
CDH3-206ENST00000567674 TIGD5Q53EQ6 642 aa12.57□□□□□ -0.4
CDH3-206ENST00000567674 HLA-CQ95604 372 aa12.57□□□□□ -0.4
CDH3-206ENST00000567674 CEP89Q96ST8 783 aa12.57□□□□□ -0.4
CDH3-206ENST00000567674 FOXP1Q9H334 677 aaPredicted RBP12.57□□□□□ -0.4
CDH3-206ENST00000567674 KCNJ14Q9UNX9 436 aa12.57□□□□□ -0.4
CDH3-206ENST00000567674 KIF3AQ9Y496 699 aa12.57□□□□□ -0.4
CDH3-206ENST00000567674 MYO9BQ13459 2157 aa12.57□□□□□ -0.4
CDH3-206ENST00000567674 PTPRSQ13332 1948 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.56□□□□□ -0.4
CDH3-206ENST00000567674 PRR33A8MZF0 331 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 TDP2O95551 362 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 EOMESO95936 686 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 ZSCAN20P17040 1043 aaPredicted RBP12.56□□□□□ -0.4
CDH3-206ENST00000567674 RFC5P40937 340 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 TRAPPC10P48553 1259 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 MCM2P49736 904 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 UBE3AQ05086 875 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 POU5F1BQ06416 359 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 COL19A1Q14993 1142 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 SKIV2LQ15477 1246 aaKnown RBP12.56□□□□□ -0.4
CDH3-206ENST00000567674 PDE12Q6L8Q7 609 aaKnown RBP12.56□□□□□ -0.4
CDH3-206ENST00000567674 PIK3AP1Q6ZUJ8 805 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 RTN4RL1Q86UN2 441 aaPredicted RBP12.56□□□□□ -0.4
CDH3-206ENST00000567674 METTL13Q8N6R0 699 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 TRAPPC12Q8WVT3 735 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 AIFM3Q96NN9 605 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 LARP6Q9BRS8 491 aaKnown RBP12.56□□□□□ -0.4
CDH3-206ENST00000567674 OSBPL7Q9BZF2 842 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 ADAMTS10Q9H324 1103 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 ZSWIM4Q9H7M6 989 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 UPF2Q9HAU5 1272 aaKnown RBP12.56□□□□□ -0.4
CDH3-206ENST00000567674 AAASQ9NRG9 546 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 TMEM161AQ9NX61 479 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 DACT1Q9NYF0 836 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 VAV3Q9UKW4 847 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 PCDHA12Q9UN75 941 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 ST3GAL5Q9UNP4 418 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 PCDHB7Q9Y5E2 793 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 STK24Q9Y6E0 443 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 REV3LO60673 3130 aa12.56□□□□□ -0.4
CDH3-206ENST00000567674 DENND3A2RUS2 1198 aa12.55□□□□□ -0.4
CDH3-206ENST00000567674 FAM86C2PA6NEL3 165 aa12.55□□□□□ -0.4
CDH3-206ENST00000567674 EPOPA6NHQ4 379 aa12.55□□□□□ -0.4
CDH3-206ENST00000567674 C9IYK1 514 aa12.55□□□□□ -0.4
CDH3-206ENST00000567674 PI4K2BG5E9Z4 385 aa12.55□□□□□ -0.4
CDH3-206ENST00000567674 MARCH6O60337 910 aa12.55□□□□□ -0.4
CDH3-206ENST00000567674 PPFIA3O75145 1194 aa12.55□□□□□ -0.4
CDH3-206ENST00000567674 ARHGEF15O94989 841 aa12.55□□□□□ -0.4
CDH3-206ENST00000567674 UPP2O95045 317 aa12.55□□□□□ -0.4
CDH3-206ENST00000567674 STBD1O95210 358 aa12.55□□□□□ -0.4
CDH3-206ENST00000567674 GPC3P51654 580 aa12.55□□□□□ -0.4
CDH3-206ENST00000567674 NFX1Q12986 1120 aaKnown RBP12.55□□□□□ -0.4
CDH3-206ENST00000567674 BTG3Q14201 252 aaPredicted RBP12.55□□□□□ -0.4
CDH3-206ENST00000567674 MICALL1Q8N3F8 863 aa12.55□□□□□ -0.4
CDH3-206ENST00000567674 TCP11Q8WWU5 503 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms