RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 RNASE9P60153 205 aaKnown RBP11.95□□□□□ -0.5
TCF4-232ENST00000566286 ZNF844Q08AG5 666 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 TRADDQ15628 312 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 ODF2Q5BJF6 829 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 NBPF5PQ86XG9 351 aaPredicted RBP11.95□□□□□ -0.5
TCF4-232ENST00000566286 CCDC65Q8IXS2 484 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 SH3RF3Q8TEJ3 882 aaPredicted RBP11.95□□□□□ -0.5
TCF4-232ENST00000566286 LMBR1Q8WVP7 490 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 CCDC114Q96M63 670 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 FAM161BQ96MY7 647 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.95□□□□□ -0.5
TCF4-232ENST00000566286 PACSIN1Q9BY11 444 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 SLITRK6Q9H5Y7 841 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 POLD4Q9HCU8 107 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 KDM3AQ9Y4C1 1321 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 TNRC6CQ9HCJ0 1690 aaKnown RBP11.95□□□□□ -0.5
TCF4-232ENST00000566286 C5orf60A6NFR6 353 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 USP17L5A8MUK1 530 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 PITPNM1O00562 1244 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 SART1O43290 800 aaKnown RBP11.95□□□□□ -0.5
TCF4-232ENST00000566286 SLC37A4O43826 429 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 CEP104O60308 925 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 ADCY7P51828 1080 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 PPP4CP60510 307 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 ARID5AQ03989 594 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 NEDD9Q14511 834 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 UAP1Q16222 522 aaPredicted RBP11.95□□□□□ -0.5
TCF4-232ENST00000566286 GLIS3Q8NEA6 775 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 NEDD1Q8NHV4 660 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 CCDC26Q8TAB7 109 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 WDR66Q8TBY9 1149 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 ZKSCAN4Q969J2 545 aaPredicted RBP11.95□□□□□ -0.5
TCF4-232ENST00000566286 PIGSQ96S52 555 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 EYA3Q99504 573 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 NT5C3AQ9H0P0 336 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 GANQ9H2C0 597 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 CPVLQ9H3G5 476 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 CCSER2Q9H7U1 834 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 SLC40A1Q9NP59 571 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 SWAP70Q9UH65 585 aa11.95□□□□□ -0.5
TCF4-232ENST00000566286 DDX20Q9UHI6 824 aaKnown RBP11.95□□□□□ -0.5
TCF4-232ENST00000566286 BRWD3Q6RI45 1802 aa11.94□□□□□ -0.5
TCF4-232ENST00000566286 UBR3Q6ZT12 1888 aa11.94□□□□□ -0.5
TCF4-232ENST00000566286 TMCO5BA8MYB1 307 aa11.94□□□□□ -0.5
TCF4-232ENST00000566286 ICMTO60725 284 aa11.94□□□□□ -0.5
TCF4-232ENST00000566286 TDP2O95551 362 aa11.94□□□□□ -0.5
TCF4-232ENST00000566286 EDRF1Q3B7T1 1238 aa11.94□□□□□ -0.5
TCF4-232ENST00000566286 SPDYCQ5MJ68 293 aa11.94□□□□□ -0.5
TCF4-232ENST00000566286 KCNK18Q7Z418 384 aa11.94□□□□□ -0.5
TCF4-232ENST00000566286 ZC3H3Q8IXZ2 948 aaKnown RBP11.94□□□□□ -0.5
TCF4-232ENST00000566286 CACNA2D3Q8IZS8 1091 aa11.94□□□□□ -0.5
TCF4-232ENST00000566286 LRRC57Q8N9N7 239 aa11.94□□□□□ -0.5
TCF4-232ENST00000566286 SLC44A5Q8NCS7 719 aa11.94□□□□□ -0.5
TCF4-232ENST00000566286 RIOX1Q9H6W3 641 aa11.94□□□□□ -0.5
TCF4-232ENST00000566286 CNOT10Q9H9A5 744 aaKnown RBP11.94□□□□□ -0.5
TCF4-232ENST00000566286 TMEM260Q9NX78 707 aa11.94□□□□□ -0.5
TCF4-232ENST00000566286 MYH7BA7E2Y1 1941 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 CETN3O15182 167 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 FLOT1O75955 427 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 LDHCP07864 332 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 SKIP12755 728 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 IFFO1Q0D2I5 559 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 PREPLQ4J6C6 727 aaPredicted RBP11.93□□□□□ -0.5
TCF4-232ENST00000566286 GKAP1Q5VSY0 366 aaPredicted RBP11.93□□□□□ -0.5
TCF4-232ENST00000566286 PPP1R18Q6NYC8 613 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 FAM196AQ6ZSG2 479 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 VPS36Q86VN1 386 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 SYCE1Q8N0S2 351 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 GIMAP7Q8NHV1 300 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 SNED1Q8TER0 1413 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 TGFBRAP1Q8WUH2 860 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 UBLCP1Q8WVY7 318 aaPredicted RBP11.93□□□□□ -0.5
TCF4-232ENST00000566286 SPAG5Q96R06 1193 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 NUDT12Q9BQG2 462 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 TGIF2Q9GZN2 237 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 VAT1LQ9HCJ6 419 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 FAM114A2Q9NRY5 505 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 LRRC4BQ9NT99 713 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 FBXL5Q9UKA1 691 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 NOC2LQ9Y3T9 749 aaKnown RBP11.93□□□□□ -0.5
TCF4-232ENST00000566286 A0A0A6YYK5 440 aaPredicted RBP11.93□□□□□ -0.5
TCF4-232ENST00000566286 KRIT1O00522 736 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 SLC26A4O43511 780 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 C21orf2O43822 256 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 EIF3BP55884 814 aaKnown RBP11.93□□□□□ -0.5
TCF4-232ENST00000566286 PTK2Q05397 1052 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 KCNH2Q12809 1159 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 SNCBQ16143 134 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 LACTB2Q53H82 288 aaPredicted RBP11.93□□□□□ -0.5
TCF4-232ENST00000566286 ANKRD20A8PQ5CZ79 823 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 HYIQ5T013 277 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 ZNF746Q6NUN9 644 aaPredicted RBP11.93□□□□□ -0.5
TCF4-232ENST00000566286 TPTE2Q6XPS3 522 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 C16orf86Q6ZW13 317 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 RASGEF1CQ8N431 466 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 MAGEC3Q8TD91 643 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 SEC14L1Q92503 715 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 ARMC5Q96C12 935 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 SEC16BQ96JE7 1060 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 NLRP3Q96P20 1036 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms