RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 RNF181Q9P0P0 153 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 VPS54Q9P1Q0 977 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 GMEB1Q9Y692 573 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 SLC4A4Q9Y6R1 1079 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 SCN9AQ15858 1988 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 A0A1W2PQC6 194 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 PALM3A6NDB9 673 aaPredicted RBP9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 TMEM221A6NGB7 291 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 E7ENQ6 273 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 USO1O60763 962 aaKnown RBP9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 VIL1P09327 827 aaKnown RBP9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 FAM200BP0CF97 657 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 TPBGLP0DKB5 382 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 PAX3P23760 479 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 GBP1P32455 592 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 CACNB3P54284 484 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 ERVK-9P63128 1117 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 CIAPIN1Q6FI81 312 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 RSBN1LQ6PCB5 846 aaPredicted RBP9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 RALYLQ86SE5 291 aaKnown RBP9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 SESTD1Q86VW0 696 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 IRF2BP1Q8IU81 584 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 ZNF579Q8NAF0 562 aaKnown RBP9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 ZNF507Q8TCN5 953 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 SH3RF3Q8TEJ3 882 aaPredicted RBP9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 UBLCP1Q8WVY7 318 aaPredicted RBP9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 TLCD1Q96CP7 247 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 TTYH3Q9C0H2 523 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 CSRNP2Q9H175 543 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 ISCUQ9H1K1 167 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 ATP8A2Q9NTI2 1148 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 RHBDL2Q9NX52 303 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 SUN2Q9UH99 717 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 SALL4Q9UJQ4 1053 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 PNMA3Q9UL41 463 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 PNMA2Q9UL42 364 aa9.93□□□□□ -0.82
AC138869.3-201ENST00000563960 ZNF541Q9H0D2 1346 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 PLEKP08567 350 aaPredicted RBP9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 GSTA2P09210 222 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 MYBP10242 640 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 FLT3P36888 993 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 BTDP43251 543 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 EVX2Q03828 476 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 KRT71Q3SY84 523 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 RBM26Q5T8P6 1007 aaKnown RBP9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 C9orf131Q5VYM1 1079 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 IRGCQ6NXR0 463 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 CCNJLQ8IV13 435 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 ARL10Q8N8L6 244 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 DNAJC9Q8WXX5 260 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 PHKBQ93100 1093 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 LRRC45Q96CN5 670 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 IFT74Q96LB3 600 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 IFIH1Q9BYX4 1025 aaKnown RBP9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 KRT23Q9C075 422 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 VPS33BQ9H267 617 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 NEUROG2Q9H2A3 272 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 RWDD2AQ9UIY3 292 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 FBXL5Q9UKA1 691 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 SCAF8Q9UPN6 1271 aaKnown RBP9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 DAGLAQ9Y4D2 1042 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 LTBP3Q9NS15 1303 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 LGALS16A8MUM7 142 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 GSG1L2A8MUP6 293 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 UBE2Q2LH0YL09 131 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 SNX3O60493 162 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 PEX11AO75192 247 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 CRKP46108 304 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 USP46P62068 366 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 SPA17Q15506 151 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 KLHDC7AQ5VTJ3 777 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 CYB5R4Q7L1T6 521 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 DDX42Q86XP3 938 aaKnown RBP eCLIP9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 TBC1D10CQ8IV04 446 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 PTPRN2Q92932 1015 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 UTP4Q969X6 686 aaKnown RBP9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 THAP9Q9H5L6 903 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 ZNHIT6Q9NWK9 470 aaKnown RBP9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 SCOCQ9UIL1 159 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 LNPEPQ9UIQ6 1025 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 PCDHA13Q9Y5I0 950 aa9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 SRPRBQ9Y5M8 271 aaKnown RBP9.92□□□□□ -0.82
AC138869.3-201ENST00000563960 MYH2Q9UKX2 1941 aa9.91□□□□□ -0.82
AC138869.3-201ENST00000563960 CYP2D7A0A087X1C5 515 aa9.91□□□□□ -0.82
AC138869.3-201ENST00000563960 FZD9O00144 591 aa9.91□□□□□ -0.82
AC138869.3-201ENST00000563960 EGFRP00533 1210 aa9.91□□□□□ -0.82
AC138869.3-201ENST00000563960 OAS1P00973 400 aaKnown RBP9.91□□□□□ -0.82
AC138869.3-201ENST00000563960 EIF6P56537 245 aaKnown RBP9.91□□□□□ -0.82
AC138869.3-201ENST00000563960 GSTO1P78417 241 aa9.91□□□□□ -0.82
AC138869.3-201ENST00000563960 MCL1Q07820 350 aa9.91□□□□□ -0.82
AC138869.3-201ENST00000563960 RRAGBQ5VZM2 374 aa9.91□□□□□ -0.82
AC138869.3-201ENST00000563960 NOSTRINQ8IVI9 506 aa9.91□□□□□ -0.82
AC138869.3-201ENST00000563960 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.91□□□□□ -0.82
AC138869.3-201ENST00000563960 RETREG2Q8NC44 543 aa9.91□□□□□ -0.82
AC138869.3-201ENST00000563960 ASAP3Q8TDY4 903 aa9.91□□□□□ -0.82
AC138869.3-201ENST00000563960 STK32AQ8WU08 396 aa9.91□□□□□ -0.82
AC138869.3-201ENST00000563960 TGFBRAP1Q8WUH2 860 aa9.91□□□□□ -0.82
AC138869.3-201ENST00000563960 TEKT1Q969V4 418 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms