RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 FBXO47Q5MNV8 452 aa12.71□□□□□ -0.37
HDGFL3-204ENST00000563790 TSHZ1Q6ZSZ6 1077 aa12.71□□□□□ -0.37
HDGFL3-204ENST00000563790 TPRG1Q6ZUI0 275 aa12.71□□□□□ -0.37
HDGFL3-204ENST00000563790 RPP25Q9BUL9 199 aaKnown RBP12.71□□□□□ -0.37
HDGFL3-204ENST00000563790 RHOBTB2Q9BYZ6 727 aa12.71□□□□□ -0.37
HDGFL3-204ENST00000563790 USP44Q9H0E7 712 aa12.71□□□□□ -0.37
HDGFL3-204ENST00000563790 RNPEPQ9H4A4 650 aa12.71□□□□□ -0.37
HDGFL3-204ENST00000563790 LRFN2Q9ULH4 789 aa12.71□□□□□ -0.37
HDGFL3-204ENST00000563790 PA2G4Q9UQ80 394 aaKnown RBP12.71□□□□□ -0.37
HDGFL3-204ENST00000563790 IRAK3Q9Y616 596 aa12.71□□□□□ -0.37
HDGFL3-204ENST00000563790 B8ZZF3 427 aa12.7□□□□□ -0.38
HDGFL3-204ENST00000563790 PPFIA4O75335 1185 aa12.7□□□□□ -0.38
HDGFL3-204ENST00000563790 SMIM10L2AP0DMW4 78 aa12.7□□□□□ -0.38
HDGFL3-204ENST00000563790 SMIM10L2BP0DMW5 78 aa12.7□□□□□ -0.38
HDGFL3-204ENST00000563790 ABCG1P45844 678 aa12.7□□□□□ -0.38
HDGFL3-204ENST00000563790 CXCL12P48061 93 aa12.7□□□□□ -0.38
HDGFL3-204ENST00000563790 CDK8P49336 464 aa12.7□□□□□ -0.38
HDGFL3-204ENST00000563790 SATB1Q01826 763 aa12.7□□□□□ -0.38
HDGFL3-204ENST00000563790 MGAT3Q09327 533 aa12.7□□□□□ -0.38
HDGFL3-204ENST00000563790 WTAPQ15007 396 aa12.7□□□□□ -0.38
HDGFL3-204ENST00000563790 PCSK4Q6UW60 755 aa12.7□□□□□ -0.38
HDGFL3-204ENST00000563790 ZNF852Q6ZMS4 543 aa12.7□□□□□ -0.38
HDGFL3-204ENST00000563790 CMASQ8NFW8 434 aaPredicted RBP12.7□□□□□ -0.38
HDGFL3-204ENST00000563790 RIOK1Q9BRS2 568 aaKnown RBP12.7□□□□□ -0.38
HDGFL3-204ENST00000563790 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.7□□□□□ -0.384e-6■■■■■ 36.3
HDGFL3-204ENST00000563790 TMEM9BQ9NQ34 198 aa12.7□□□□□ -0.38
HDGFL3-204ENST00000563790 COPRSQ9NQ92 184 aa12.7□□□□□ -0.38
HDGFL3-204ENST00000563790 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.7□□□□□ -0.38
HDGFL3-204ENST00000563790 NYAP2Q9P242 653 aa12.7□□□□□ -0.38
HDGFL3-204ENST00000563790 ADGRG4Q8IZF6 3080 aa12.7□□□□□ -0.38
HDGFL3-204ENST00000563790 DNHD1Q96M86 4753 aa12.69□□□□□ -0.38
HDGFL3-204ENST00000563790 COL4A2P08572 1712 aa12.69□□□□□ -0.38
HDGFL3-204ENST00000563790 ADAMTS9Q9P2N4 1935 aa12.69□□□□□ -0.38
HDGFL3-204ENST00000563790 SPAARA0A1B0GVQ0 90 aa12.69□□□□□ -0.38
HDGFL3-204ENST00000563790 SPDYE4A6NLX3 237 aa12.69□□□□□ -0.38
HDGFL3-204ENST00000563790 VAMP4O75379 141 aa12.69□□□□□ -0.38
HDGFL3-204ENST00000563790 PAPSS2O95340 614 aaPredicted RBP12.69□□□□□ -0.38
HDGFL3-204ENST00000563790 CXCL14O95715 111 aa12.69□□□□□ -0.38
HDGFL3-204ENST00000563790 TFCP2Q12800 502 aa12.69□□□□□ -0.38
HDGFL3-204ENST00000563790 KCNT2Q6UVM3 1135 aa12.69□□□□□ -0.38
HDGFL3-204ENST00000563790 CYP26C1Q6V0L0 522 aa12.69□□□□□ -0.38
HDGFL3-204ENST00000563790 CCNI2Q6ZMN8 369 aaPredicted RBP12.69□□□□□ -0.38
HDGFL3-204ENST00000563790 SLC32A1Q9H598 525 aa12.69□□□□□ -0.38
HDGFL3-204ENST00000563790 AGO3Q9H9G7 860 aaKnown RBP12.69□□□□□ -0.38
HDGFL3-204ENST00000563790 DDX41Q9UJV9 622 aaKnown RBP12.69□□□□□ -0.38
HDGFL3-204ENST00000563790 SPENQ96T58 3664 aaKnown RBP12.69□□□□□ -0.38
HDGFL3-204ENST00000563790 ABCA2Q9BZC7 2435 aa12.69□□□□□ -0.38
HDGFL3-204ENST00000563790 NOTCH4Q99466 2003 aa12.68□□□□□ -0.38
HDGFL3-204ENST00000563790 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.68□□□□□ -0.38
HDGFL3-204ENST00000563790 K7ESF4 209 aa12.68□□□□□ -0.38
HDGFL3-204ENST00000563790 CDX4O14627 284 aaPredicted RBP12.68□□□□□ -0.38
HDGFL3-204ENST00000563790 STAT2P52630 851 aa12.68□□□□□ -0.38
HDGFL3-204ENST00000563790 BMS1Q14692 1282 aaKnown RBP12.68□□□□□ -0.38
HDGFL3-204ENST00000563790 ZNF423Q2M1K9 1284 aa12.68□□□□□ -0.38
HDGFL3-204ENST00000563790 CACNA2D4Q7Z3S7 1137 aa12.68□□□□□ -0.38
HDGFL3-204ENST00000563790 PPFIBP1Q86W92 1011 aa12.68□□□□□ -0.38
HDGFL3-204ENST00000563790 DNERQ8NFT8 737 aa12.68□□□□□ -0.38
HDGFL3-204ENST00000563790 FGF14Q92915 247 aa12.68□□□□□ -0.38
HDGFL3-204ENST00000563790 C16orf70Q9BSU1 422 aa12.68□□□□□ -0.38
HDGFL3-204ENST00000563790 PIH1D3Q9NQM4 214 aaKnown RBP12.68□□□□□ -0.38
HDGFL3-204ENST00000563790 SPG21Q9NZD8 308 aa12.68□□□□□ -0.38
HDGFL3-204ENST00000563790 NXF1Q9UBU9 619 aaKnown RBP12.68□□□□□ -0.38
HDGFL3-204ENST00000563790 B4DLN1 442 aa12.67□□□□□ -0.38
HDGFL3-204ENST00000563790 GNAT1P11488 350 aa12.67□□□□□ -0.38
HDGFL3-204ENST00000563790 POU3F2P20265 443 aaPredicted RBP12.67□□□□□ -0.38
HDGFL3-204ENST00000563790 CD52P31358 61 aa12.67□□□□□ -0.38
HDGFL3-204ENST00000563790 CA8P35219 290 aa12.67□□□□□ -0.38
HDGFL3-204ENST00000563790 SARSP49591 514 aaKnown RBP12.67□□□□□ -0.38
HDGFL3-204ENST00000563790 MRPL12P52815 198 aaKnown RBP12.67□□□□□ -0.38
HDGFL3-204ENST00000563790 ADAM17P78536 824 aa12.67□□□□□ -0.38
HDGFL3-204ENST00000563790 SERINC3Q13530 473 aa12.67□□□□□ -0.38
HDGFL3-204ENST00000563790 LAMC2Q13753 1193 aa12.67□□□□□ -0.38
HDGFL3-204ENST00000563790 C4orf17Q53FE4 359 aa12.67□□□□□ -0.38
HDGFL3-204ENST00000563790 HEATR6Q6AI08 1181 aaKnown RBP12.67□□□□□ -0.38
HDGFL3-204ENST00000563790 TMEM87AQ8NBN3 555 aa12.67□□□□□ -0.38
HDGFL3-204ENST00000563790 PIP4K2CQ8TBX8 421 aa12.67□□□□□ -0.38
HDGFL3-204ENST00000563790 ZNF558Q96NG5 402 aa12.67□□□□□ -0.38
HDGFL3-204ENST00000563790 DCP1AQ9NPI6 582 aaPredicted RBP12.67□□□□□ -0.38
HDGFL3-204ENST00000563790 PAXBP1Q9Y5B6 917 aa12.67□□□□□ -0.38
HDGFL3-204ENST00000563790 PCDHB7Q9Y5E2 793 aa12.67□□□□□ -0.38
HDGFL3-204ENST00000563790 NIPBLQ6KC79 2804 aaeCLIP12.66□□□□□ -0.38
HDGFL3-204ENST00000563790 PTPDC1A2A3K4 754 aa12.66□□□□□ -0.38
HDGFL3-204ENST00000563790 NFIBO00712 420 aa12.66□□□□□ -0.38
HDGFL3-204ENST00000563790 GIT2Q14161 759 aa12.66□□□□□ -0.38
HDGFL3-204ENST00000563790 FAM102BQ5T8I3 360 aa12.66□□□□□ -0.38
HDGFL3-204ENST00000563790 TMED8Q6PL24 325 aaPredicted RBP12.66□□□□□ -0.38
HDGFL3-204ENST00000563790 SLC30A10Q6XR72 485 aa12.66□□□□□ -0.38
HDGFL3-204ENST00000563790 C16orf86Q6ZW13 317 aa12.66□□□□□ -0.38
HDGFL3-204ENST00000563790 KBTBD6Q86V97 674 aa12.66□□□□□ -0.38
HDGFL3-204ENST00000563790 WDR5BQ86VZ2 330 aa12.66□□□□□ -0.38
HDGFL3-204ENST00000563790 ST13P5Q8NFI4 369 aaPredicted RBP12.66□□□□□ -0.38
HDGFL3-204ENST00000563790 CRNKL1Q9BZJ0 848 aaKnown RBP12.66□□□□□ -0.38
HDGFL3-204ENST00000563790 IL17BQ9UHF5 180 aa12.66□□□□□ -0.38
HDGFL3-204ENST00000563790 CCPG1Q9ULG6 757 aa12.66□□□□□ -0.38
HDGFL3-204ENST00000563790 MYH6P13533 1939 aa12.66□□□□□ -0.38
HDGFL3-204ENST00000563790 CSMD1Q96PZ7 3565 aa12.66□□□□□ -0.38
HDGFL3-204ENST00000563790 TMEM232C9JQI7 657 aa12.65□□□□□ -0.38
HDGFL3-204ENST00000563790 H3BRB1 525 aa12.65□□□□□ -0.38
HDGFL3-204ENST00000563790 BMP3P12645 472 aa12.65□□□□□ -0.38
HDGFL3-204ENST00000563790 HOXA6P31267 233 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms