RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 TMEM40Q8WWA1 233 aa28.38■■■□□ 2.13
SPG7-208ENST00000563783 WASF1Q92558 559 aa28.38■■■□□ 2.13
SPG7-208ENST00000563783 UNC45AQ9H3U1 944 aa28.38■■■□□ 2.13
SPG7-208ENST00000563783 TPCN1Q9ULQ1 816 aa28.38■■■□□ 2.13
SPG7-208ENST00000563783 CDC42EP1Q00587 391 aa28.37■■■□□ 2.13
SPG7-208ENST00000563783 NFX1Q12986 1120 aaKnown RBP28.37■■■□□ 2.13
SPG7-208ENST00000563783 PUS10Q3MIT2 529 aaKnown RBP28.37■■■□□ 2.13
SPG7-208ENST00000563783 METTL13Q8N6R0 699 aa28.37■■■□□ 2.13
SPG7-208ENST00000563783 AIFM3Q96NN9 605 aa28.37■■■□□ 2.13
SPG7-208ENST00000563783 NAP1L4Q99733 375 aaKnown RBP28.37■■■□□ 2.13
SPG7-208ENST00000563783 LARP6Q9BRS8 491 aaKnown RBP28.37■■■□□ 2.13
SPG7-208ENST00000563783 CDHR5Q9HBB8 845 aa28.37■■■□□ 2.13
SPG7-208ENST00000563783 ST3GAL5Q9UNP4 418 aa28.37■■■□□ 2.13
SPG7-208ENST00000563783 TDP2O95551 362 aa28.36■■■□□ 2.13
SPG7-208ENST00000563783 TARBP2Q15633 366 aaKnown RBP28.36■■■□□ 2.13
SPG7-208ENST00000563783 KIZQ2M2Z5 673 aa28.36■■■□□ 2.13
SPG7-208ENST00000563783 TMEM266Q2M3C6 531 aa28.36■■■□□ 2.13
SPG7-208ENST00000563783 PPP4R3AQ6IN85 833 aa28.36■■■□□ 2.13
SPG7-208ENST00000563783 MIER3Q7Z3K6 550 aa28.36■■■□□ 2.13
SPG7-208ENST00000563783 FAM20AQ96MK3 541 aa28.36■■■□□ 2.13
SPG7-208ENST00000563783 NIFKQ9BYG3 293 aaKnown RBP28.36■■■□□ 2.13
SPG7-208ENST00000563783 ELAC1Q9H777 363 aaKnown RBP28.36■■■□□ 2.13
SPG7-208ENST00000563783 LRFN2Q9ULH4 789 aa28.36■■■□□ 2.13
SPG7-208ENST00000563783 GINS2Q9Y248 185 aa28.36■■■□□ 2.13
SPG7-208ENST00000563783 CCDC194A0A1B0GVG4 234 aa28.35■■■□□ 2.13
SPG7-208ENST00000563783 DENND3A2RUS2 1198 aa28.35■■■□□ 2.13
SPG7-208ENST00000563783 C9IYK1 514 aa28.35■■■□□ 2.13
SPG7-208ENST00000563783 MMP1P03956 469 aa28.35■■■□□ 2.13
SPG7-208ENST00000563783 XKR3Q5GH77 459 aa28.35■■■□□ 2.13
SPG7-208ENST00000563783 EFCAB12Q6NXP0 572 aa28.35■■■□□ 2.13
SPG7-208ENST00000563783 PABPC5Q96DU9 382 aaKnown RBP28.35■■■□□ 2.13
SPG7-208ENST00000563783 ADAM2Q99965 735 aa28.35■■■□□ 2.13
SPG7-208ENST00000563783 DDX25Q9UHL0 483 aaKnown RBP28.35■■■□□ 2.13
SPG7-208ENST00000563783 PCDHB7Q9Y5E2 793 aa28.35■■■□□ 2.13
SPG7-208ENST00000563783 MRPL42Q9Y6G3 142 aaKnown RBP28.35■■■□□ 2.13
SPG7-208ENST00000563783 TBX3O15119 743 aa28.34■■■□□ 2.13
SPG7-208ENST00000563783 VTNP04004 478 aa28.34■■■□□ 2.13
SPG7-208ENST00000563783 FAM189BP81408 668 aa28.34■■■□□ 2.13
SPG7-208ENST00000563783 UGCGQ16739 394 aa28.34■■■□□ 2.13
SPG7-208ENST00000563783 NEK8Q86SG6 692 aa28.34■■■□□ 2.13
SPG7-208ENST00000563783 FAM228AQ86W67 206 aa28.34■■■□□ 2.13
SPG7-208ENST00000563783 NEK9Q8TD19 979 aa28.34■■■□□ 2.13
SPG7-208ENST00000563783 OSMRQ99650 979 aa28.34■■■□□ 2.13
SPG7-208ENST00000563783 ADAMTS10Q9H324 1103 aa28.34■■■□□ 2.13
SPG7-208ENST00000563783 CHMP2AO43633 222 aa28.33■■■□□ 2.13
SPG7-208ENST00000563783 MGEA5O60502 916 aa28.33■■■□□ 2.13
SPG7-208ENST00000563783 EIF4BP23588 611 aaKnown RBP28.33■■■□□ 2.13
SPG7-208ENST00000563783 CLCN3P51790 818 aa28.33■■■□□ 2.13
SPG7-208ENST00000563783 TBC1D8BQ0IIM8 1120 aa28.33■■■□□ 2.13
SPG7-208ENST00000563783 DSC3Q14574 896 aa28.33■■■□□ 2.13
SPG7-208ENST00000563783 INF2Q27J81 1249 aa28.33■■■□□ 2.13
SPG7-208ENST00000563783 KCNMB3Q9NPA1 279 aa28.33■■■□□ 2.13
SPG7-208ENST00000563783 TMEM161AQ9NX61 479 aa28.33■■■□□ 2.13
SPG7-208ENST00000563783 AKT3Q9Y243 479 aa28.33■■■□□ 2.13
SPG7-208ENST00000563783 AK2P54819 239 aa28.32■■■□□ 2.12
SPG7-208ENST00000563783 NLRP11P59045 1033 aaKnown RBP28.32■■■□□ 2.12
SPG7-208ENST00000563783 PPP2R5CQ13362 524 aa28.32■■■□□ 2.12
SPG7-208ENST00000563783 TCEAL5Q5H9L2 206 aa28.32■■■□□ 2.12
SPG7-208ENST00000563783 KCNJ14Q9UNX9 436 aa28.32■■■□□ 2.12
SPG7-208ENST00000563783 PLAGL2Q9UPG8 496 aa28.32■■■□□ 2.12
SPG7-208ENST00000563783 PPME1Q9Y570 386 aa28.32■■■□□ 2.12
SPG7-208ENST00000563783 IGKV6-21A0A0C4DH24 114 aa28.31■■■□□ 2.12
SPG7-208ENST00000563783 GRM6O15303 877 aa28.31■■■□□ 2.12
SPG7-208ENST00000563783 DKC1O60832 514 aaKnown RBP eCLIP28.31■■■□□ 2.12
SPG7-208ENST00000563783 KCNA5P22460 613 aa28.31■■■□□ 2.12
SPG7-208ENST00000563783 CSPP1Q1MSJ5 1256 aa28.31■■■□□ 2.12
SPG7-208ENST00000563783 ORC3Q9UBD5 711 aaPredicted RBP28.31■■■□□ 2.12
SPG7-208ENST00000563783 HOXA2O43364 376 aa28.3■■■□□ 2.12
SPG7-208ENST00000563783 STBD1O95210 358 aa28.3■■■□□ 2.12
SPG7-208ENST00000563783 CTDNEP1O95476 244 aa28.3■■■□□ 2.12
SPG7-208ENST00000563783 GPC3P51654 580 aa28.3■■■□□ 2.12
SPG7-208ENST00000563783 PSMC5P62195 406 aa28.3■■■□□ 2.12
SPG7-208ENST00000563783 TRMT1LQ7Z2T5 733 aaKnown RBP28.3■■■□□ 2.12
SPG7-208ENST00000563783 GTF3C6Q969F1 213 aa28.3■■■□□ 2.12
SPG7-208ENST00000563783 PPP2R3CQ969Q6 453 aa28.3■■■□□ 2.12
SPG7-208ENST00000563783 NECAB3Q96P71 396 aaPredicted RBP28.3■■■□□ 2.12
SPG7-208ENST00000563783 CEP89Q96ST8 783 aa28.3■■■□□ 2.12
SPG7-208ENST00000563783 JPH2Q9BR39 696 aaPredicted RBP28.3■■■□□ 2.12
SPG7-208ENST00000563783 AAASQ9NRG9 546 aa28.3■■■□□ 2.12
SPG7-208ENST00000563783 FAM50BQ9Y247 325 aa28.3■■■□□ 2.12
SPG7-208ENST00000563783 SLC37A4O43826 429 aa28.29■■■□□ 2.12
SPG7-208ENST00000563783 UBE3AQ05086 875 aa28.29■■■□□ 2.12
SPG7-208ENST00000563783 CTC1Q2NKJ3 1217 aa28.29■■■□□ 2.12
SPG7-208ENST00000563783 LETM2Q2VYF4 491 aa28.29■■■□□ 2.12
SPG7-208ENST00000563783 LRRC71Q8N4P6 559 aa28.29■■■□□ 2.12
SPG7-208ENST00000563783 RSPH1Q8WYR4 309 aa28.29■■■□□ 2.12
SPG7-208ENST00000563783 VAV3Q9UKW4 847 aa28.29■■■□□ 2.12
SPG7-208ENST00000563783 PLXNA4Q9HCM2 1894 aa28.29■■■□□ 2.12
SPG7-208ENST00000563783 DARSP14868 501 aaKnown RBP28.28■■■□□ 2.12
SPG7-208ENST00000563783 DNM2P50570 870 aa28.28■■■□□ 2.12
SPG7-208ENST00000563783 EXOC8Q8IYI6 725 aa28.28■■■□□ 2.12
SPG7-208ENST00000563783 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.28■■■□□ 2.12
SPG7-208ENST00000563783 GJA10Q969M2 543 aa28.28■■■□□ 2.12
SPG7-208ENST00000563783 ATP6V0A4Q9HBG4 840 aa28.28■■■□□ 2.12
SPG7-208ENST00000563783 BRMS1Q9HCU9 246 aa28.28■■■□□ 2.12
SPG7-208ENST00000563783 SEPT9Q9UHD8 586 aaPredicted RBP28.28■■■□□ 2.12
SPG7-208ENST00000563783 ITGB1P05556 798 aa28.27■■■□□ 2.12
SPG7-208ENST00000563783 ZSCAN20P17040 1043 aaPredicted RBP28.27■■■□□ 2.12
SPG7-208ENST00000563783 ZNF410Q86VK4 478 aa28.27■■■□□ 2.12
SPG7-208ENST00000563783 SPPL3Q8TCT6 385 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms