RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 SYN1P17600 705 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 EDNRBP24530 442 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 SMARCA1P28370 1054 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 NAPAP54920 295 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 PGM5Q15124 567 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 STXBP2Q15833 593 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 PCSK7Q16549 785 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 IQSEC1Q6DN90 963 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 KANK3Q6NY19 840 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 SLC39A5Q6ZMH5 540 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 C1orf229Q6ZS94 237 aaPredicted RBP6.66□□□□□ -1.34
CDH13-206ENST00000562601 RAB44Q7Z6P3 723 aaPredicted RBP6.66□□□□□ -1.34
CDH13-206ENST00000562601 RNF180Q86T96 592 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 TLK2Q86UE8 772 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 RGL4Q8IZJ4 473 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 KLHDC9Q8NEP7 349 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 SMARCC2Q8TAQ2 1214 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 PPP1R13LQ8WUF5 828 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 PIK3R5Q8WYR1 880 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 CUL5Q93034 780 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 PGBD1Q96JS3 809 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 MPHOSPH6Q99547 160 aaKnown RBP6.66□□□□□ -1.34
CDH13-206ENST00000562601 SLC26A6Q9BXS9 759 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 AGXT2Q9BYV1 514 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 AP5M1Q9H0R1 490 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 PSTPIP2Q9H939 334 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 RTEL1Q9NZ71 1219 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 KLF15Q9UIH9 416 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 MKL2Q9ULH7 1088 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 ZMYND8Q9ULU4 1186 aaPredicted RBP6.66□□□□□ -1.34
CDH13-206ENST00000562601 GNEQ9Y223 722 aaKnown RBP6.66□□□□□ -1.34
CDH13-206ENST00000562601 ATP11BQ9Y2G3 1177 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 FNDC3AQ9Y2H6 1198 aaKnown RBP6.66□□□□□ -1.34
CDH13-206ENST00000562601 CCDC196A0A1B0GTZ2 297 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 A0A1W2PQ45 241 aaPredicted RBP6.65□□□□□ -1.34
CDH13-206ENST00000562601 A0A1W2PQY0 241 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 RBM47A0AV96 593 aaKnown RBP6.65□□□□□ -1.34
CDH13-206ENST00000562601 SMCO2A6NFE2 343 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 B4DLN1 442 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 STXBP3O00186 592 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 CTAGE5O15320 804 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 ASGR1P07306 291 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 MYL3P08590 195 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 CAPN2P17655 700 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 NFKB1P19838 968 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 CCND2P30279 289 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 NEK4P51957 841 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 MRPL12P52815 198 aaKnown RBP6.65□□□□□ -1.34
CDH13-206ENST00000562601 ACLYP53396 1101 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 AK2P54819 239 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 GJA9P57773 515 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 RTP1P59025 263 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 CHMP4BP1P59074 171 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 KCNMA1Q12791 1236 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 TRAF1Q13077 416 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 GRIN2CQ14957 1233 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 NTRK3Q16288 839 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 PKN1Q16512 942 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 FSCN1Q16658 493 aaKnown RBP6.65□□□□□ -1.34
CDH13-206ENST00000562601 TRIM60Q495X7 471 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 DUSP28Q4G0W2 176 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 CCSAPQ6IQ19 270 aaPredicted RBP6.65□□□□□ -1.34
CDH13-206ENST00000562601 ALKBH2Q6NS38 261 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 CHSY3Q70JA7 882 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 FBXL16Q8N461 479 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 NECAB1Q8N987 351 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 OR6J1Q8NGC5 347 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 BTBD6Q96KE9 485 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 IWS1Q96ST2 819 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 PDCD2LQ9BRP1 358 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 UBE2OQ9C0C9 1292 aaKnown RBP6.65□□□□□ -1.34
CDH13-206ENST00000562601 UPF3AQ9H1J1 476 aaKnown RBP6.65□□□□□ -1.34
CDH13-206ENST00000562601 BCAS3Q9H6U6 928 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 SPC25Q9HBM1 224 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 TMEM260Q9NX78 707 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 TPCN1Q9ULQ1 816 aa6.65□□□□□ -1.34
CDH13-206ENST00000562601 LOC102724159A0A0B4J2E5 919 aa6.64□□□□□ -1.35
CDH13-206ENST00000562601 CARNS1A5YM72 827 aa6.64□□□□□ -1.35
CDH13-206ENST00000562601 CPLX1O14810 134 aa6.64□□□□□ -1.35
CDH13-206ENST00000562601 PRPF3O43395 683 aaKnown RBP6.64□□□□□ -1.35
CDH13-206ENST00000562601 PQBP1O60828 265 aaKnown RBP6.64□□□□□ -1.35
CDH13-206ENST00000562601 XYLBO75191 536 aa6.64□□□□□ -1.35
CDH13-206ENST00000562601 EIF3JO75822 258 aaKnown RBP6.64□□□□□ -1.35
CDH13-206ENST00000562601 MAP3K6O95382 1288 aa6.64□□□□□ -1.35
CDH13-206ENST00000562601 LARGE1O95461 756 aa6.64□□□□□ -1.35
CDH13-206ENST00000562601 RPLP1P05386 114 aaKnown RBP6.64□□□□□ -1.35
CDH13-206ENST00000562601 SCG2P13521 617 aa6.64□□□□□ -1.35
CDH13-206ENST00000562601 ADH7P40394 386 aa6.64□□□□□ -1.35
CDH13-206ENST00000562601 ADCY7P51828 1080 aa6.64□□□□□ -1.35
CDH13-206ENST00000562601 RCAN1P53805 252 aa6.64□□□□□ -1.35
CDH13-206ENST00000562601 EVCP57679 992 aa6.64□□□□□ -1.35
CDH13-206ENST00000562601 ANAPC15P60006 121 aa6.64□□□□□ -1.35
CDH13-206ENST00000562601 PSMC6P62333 389 aa6.64□□□□□ -1.35
CDH13-206ENST00000562601 MRPS9P82933 396 aaKnown RBP6.64□□□□□ -1.35
CDH13-206ENST00000562601 AKAP17AQ02040 695 aaKnown RBP6.64□□□□□ -1.35
CDH13-206ENST00000562601 SP2Q02086 613 aa6.64□□□□□ -1.35
CDH13-206ENST00000562601 GHRHRQ02643 423 aa6.64□□□□□ -1.35
CDH13-206ENST00000562601 SSRP1Q08945 709 aaKnown RBP6.64□□□□□ -1.35
CDH13-206ENST00000562601 SCRN1Q12765 414 aa6.64□□□□□ -1.35
CDH13-206ENST00000562601 TTLL4Q14679 1199 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms