RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 CAMKK2Q96RR4 588 aa15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 NOC4LQ9BVI4 516 aaKnown RBP15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 NT5C3AQ9H0P0 336 aa15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 CNOT10Q9H9A5 744 aaKnown RBP15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 EPB41L5Q9HCM4 733 aa15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 NOP53Q9NZM5 478 aaKnown RBP15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 CPSF2Q9P2I0 782 aaKnown RBP15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 SYNPO2Q9UMS6 1093 aa15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 PCDHA13Q9Y5I0 950 aa15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 DUSP10Q9Y6W6 482 aa15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 A0A1W2PRG0 241 aa15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 LUC7L3O95232 432 aaKnown RBP15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 GLI1P08151 1106 aa15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 FAM153BP0C7A2 387 aa15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 IBSPP21815 317 aaPredicted RBP15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 PPP2R2AP63151 447 aa15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 ARHGAP4P98171 946 aa15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 GUCY2DQ02846 1103 aa15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 BYSLQ13895 437 aaKnown RBP15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 SPRED3Q2MJR0 410 aa15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 FAM153CQ494X1 144 aa15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 MICAL1Q8TDZ2 1067 aa15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 FAM210AQ96ND0 272 aa15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 FAM153AQ9UHL3 310 aa15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 HERC5Q9UII4 1024 aaKnown RBP15.2■□□□□ 0.02
RABGGTA-220ENST00000560998 SPDYE2BA6NHP3 402 aa15.19■□□□□ 0.02
RABGGTA-220ENST00000560998 SMNDC1O75940 238 aaKnown RBP eCLIP15.19■□□□□ 0.02
RABGGTA-220ENST00000560998 SPDYE6P0CI01 402 aa15.19■□□□□ 0.02
RABGGTA-220ENST00000560998 KLK7P49862 253 aa15.19■□□□□ 0.02
RABGGTA-220ENST00000560998 LRRC63Q05C16 580 aa15.19■□□□□ 0.02
RABGGTA-220ENST00000560998 IKQ13123 557 aaPredicted RBP15.19■□□□□ 0.02
RABGGTA-220ENST00000560998 MTMR3Q13615 1198 aa15.19■□□□□ 0.02
RABGGTA-220ENST00000560998 CUL1Q13616 776 aa15.19■□□□□ 0.02
RABGGTA-220ENST00000560998 RSBN1LQ6PCB5 846 aaPredicted RBP15.19■□□□□ 0.02
RABGGTA-220ENST00000560998 SLFN12Q8IYM2 578 aa15.19■□□□□ 0.02
RABGGTA-220ENST00000560998 ANKS4BQ8N8V4 417 aa15.19■□□□□ 0.02
RABGGTA-220ENST00000560998 CENPTQ96BT3 561 aa15.19■□□□□ 0.02
RABGGTA-220ENST00000560998 UIMC1Q96RL1 719 aa15.19■□□□□ 0.02
RABGGTA-220ENST00000560998 ERGIC2Q96RQ1 377 aa15.19■□□□□ 0.02
RABGGTA-220ENST00000560998 KIF9Q9HAQ2 790 aa15.19■□□□□ 0.02
RABGGTA-220ENST00000560998 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.19■□□□□ 0.02
RABGGTA-220ENST00000560998 SLC12A4Q9UP95 1085 aa15.19■□□□□ 0.02
RABGGTA-220ENST00000560998 CCT8L1PA6NM43 557 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 NKRFO15226 690 aaKnown RBP eCLIP15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 MOCS3O95396 460 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 FGFR1OPO95684 399 aaKnown RBP15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 ALADP13716 330 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 PECAM1P16284 738 aaPredicted RBP15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 HPDP32754 393 aaPredicted RBP15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 EN1Q05925 392 aaPredicted RBP15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 MYO1EQ12965 1108 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 COASYQ13057 564 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 ITIH4Q14624 930 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 USH1GQ495M9 461 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 MIS18BP1Q6P0N0 1132 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 FOXR2Q6PJQ5 311 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 APLFQ8IW19 511 aaPredicted RBP15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 CCDC63Q8NA47 563 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 GLIS3Q8NEA6 775 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 ETNPPLQ8TBG4 499 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 ITFG2Q969R8 447 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 HINFPQ9BQA5 517 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 AGPAT5Q9NUQ2 364 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 TMOD2Q9NZR1 351 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 BAIAP2L1Q9UHR4 511 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 KIAA1024Q9UPX6 916 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 TCP10L2B9ZVM9 353 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 E9PMD0 336 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 OPLAHO14841 1288 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 ZNF263O14978 683 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 AHCYL1O43865 530 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 FOSP01100 380 aaPredicted RBP15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 SREBF1P36956 1147 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 STAT3P40763 770 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 TNNC1P63316 161 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 CYP27A1Q02318 531 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 PDCD2Q16342 344 aaPredicted RBP15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 QPCTQ16769 361 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 ACCSLQ4AC99 568 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 Q4G0T1 1027 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 FKBP15Q5T1M5 1219 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 HIBCHQ6NVY1 386 aaPredicted RBP15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 LRRC55Q6ZSA7 311 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 CACNA2D4Q7Z3S7 1137 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 CCDC197Q8NCU1 140 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 CASKIN2Q8WXE0 1202 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 IFT81Q8WYA0 676 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 STAMBPL1Q96FJ0 436 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 NOX5Q96PH1 765 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 GMLQ99445 158 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 PANK4Q9NVE7 773 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 ABCB11O95342 1321 aa15.18■□□□□ 0.02
RABGGTA-220ENST00000560998 GOLGA6L10A0A0M3HER8 536 aa15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 POTEB3A0JP26 581 aa15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 POTECB2RU33 542 aa15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 TBX3O15119 743 aa15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 FESP07332 822 aa15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 PLA2G4BP0C869 781 aa15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 MYBP10242 640 aa15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 DRD4P21917 467 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms