RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 FAM184AQ8NB25 1140 aa13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 PPM1EQ8WY54 764 aa13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 TMX3Q96JJ7 454 aa13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 OSMRQ99650 979 aa13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 NIFKQ9BYG3 293 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 TMEM60Q9H2L4 133 aa13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 SUGCTQ9HAC7 445 aa13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 ERVK-5Q9HDB9 667 aa13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 INSL6Q9Y581 213 aa13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 SQORQ9Y6N5 450 aa13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 VCANP13611 3396 aa13.09□□□□□ -0.31
RABGGTA-216ENST00000560243 COL4A6Q14031 1691 aa13.08□□□□□ -0.31
RABGGTA-216ENST00000560243 ZBTB39O15060 712 aa13.08□□□□□ -0.32
RABGGTA-216ENST00000560243 MGEA5O60502 916 aa13.08□□□□□ -0.32
RABGGTA-216ENST00000560243 NEMFO60524 1076 aa13.08□□□□□ -0.32
RABGGTA-216ENST00000560243 MCM7P33993 719 aa13.08□□□□□ -0.32
RABGGTA-216ENST00000560243 QARSP47897 775 aaKnown RBP13.08□□□□□ -0.32
RABGGTA-216ENST00000560243 CRYBB1P53674 252 aaPredicted RBP13.08□□□□□ -0.32
RABGGTA-216ENST00000560243 NPEPPSP55786 919 aa13.08□□□□□ -0.32
RABGGTA-216ENST00000560243 NLRP11P59045 1033 aaKnown RBP13.08□□□□□ -0.32
RABGGTA-216ENST00000560243 PSMC5P62195 406 aa13.08□□□□□ -0.32
RABGGTA-216ENST00000560243 TBC1D8BQ0IIM8 1120 aa13.08□□□□□ -0.32
RABGGTA-216ENST00000560243 NFX1Q12986 1120 aaKnown RBP13.08□□□□□ -0.32
RABGGTA-216ENST00000560243 CCDC85BQ15834 202 aaPredicted RBP13.08□□□□□ -0.32
RABGGTA-216ENST00000560243 CALCRLQ16602 461 aa13.08□□□□□ -0.32
RABGGTA-216ENST00000560243 SLFN12Q8IYM2 578 aa13.08□□□□□ -0.32
RABGGTA-216ENST00000560243 SP7Q8TDD2 431 aaPredicted RBP13.08□□□□□ -0.32
RABGGTA-216ENST00000560243 DYDC2Q96IM9 177 aa13.08□□□□□ -0.32
RABGGTA-216ENST00000560243 MTMR9Q96QG7 549 aa13.08□□□□□ -0.32
RABGGTA-216ENST00000560243 YME1L1Q96TA2 773 aa13.08□□□□□ -0.32
RABGGTA-216ENST00000560243 C17orf80Q9BSJ5 609 aa13.08□□□□□ -0.32
RABGGTA-216ENST00000560243 ADAMTS10Q9H324 1103 aa13.08□□□□□ -0.32
RABGGTA-216ENST00000560243 PRDM6Q9NQX0 595 aa13.08□□□□□ -0.32
RABGGTA-216ENST00000560243 AKT3Q9Y243 479 aa13.08□□□□□ -0.32
RABGGTA-216ENST00000560243 LPXNO60711 386 aa13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 RPS6KA5O75582 802 aa13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 BAG4O95429 457 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 P4HBP07237 508 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 TXKP42681 527 aa13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 ERVK-21P61565 698 aa13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 CYP4A11Q02928 519 aa13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 GRB10Q13322 594 aa13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 CTTNQ14247 550 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 NBR1Q14596 966 aa13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 EPHA7Q15375 998 aa13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 ZNF174Q15697 407 aa13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 FAM228AQ86W67 206 aa13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 CRIPAKQ8N1N5 446 aa13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 GDPD5Q8WTR4 605 aa13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 TGS1Q96RS0 853 aaKnown RBP13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 MAP7D2Q96T17 732 aa13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 LXNQ9BS40 222 aa13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 TSPYL2Q9H2G4 693 aaPredicted RBP13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 FOXP1Q9H334 677 aaPredicted RBP13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 TTC12Q9H892 705 aaPredicted RBP13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 PCDHA12Q9UN75 941 aa13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 ST3GAL5Q9UNP4 418 aa13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 MYO7AQ13402 2215 aa13.07□□□□□ -0.32
RABGGTA-216ENST00000560243 NLRC5Q86WI3 1866 aa13.06□□□□□ -0.32
RABGGTA-216ENST00000560243 BRWD1Q9NSI6 2320 aa13.06□□□□□ -0.32
RABGGTA-216ENST00000560243 IGKV6-21A0A0C4DH24 114 aa13.06□□□□□ -0.32
RABGGTA-216ENST00000560243 CSDE1O75534 798 aaKnown RBP13.06□□□□□ -0.32
RABGGTA-216ENST00000560243 SLITRK3O94933 977 aa13.06□□□□□ -0.32
RABGGTA-216ENST00000560243 IBSPP21815 317 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-216ENST00000560243 TMOD1P28289 359 aa13.06□□□□□ -0.32
RABGGTA-216ENST00000560243 NOSTRINQ8IVI9 506 aa13.06□□□□□ -0.32
RABGGTA-216ENST00000560243 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.06□□□□□ -0.32
RABGGTA-216ENST00000560243 MICALL1Q8N3F8 863 aa13.06□□□□□ -0.32
RABGGTA-216ENST00000560243 EIF2AK1Q9BQI3 630 aaKnown RBP13.06□□□□□ -0.32
RABGGTA-216ENST00000560243 FTHL17Q9BXU8 183 aa13.06□□□□□ -0.32
RABGGTA-216ENST00000560243 BACH2Q9BYV9 841 aa13.06□□□□□ -0.32
RABGGTA-216ENST00000560243 RC3H2Q9HBD1 1191 aaKnown RBP13.06□□□□□ -0.32
RABGGTA-216ENST00000560243 CYP26B1Q9NR63 512 aa13.06□□□□□ -0.32
RABGGTA-216ENST00000560243 MTCH2Q9Y6C9 303 aa13.06□□□□□ -0.32
RABGGTA-216ENST00000560243 ARID2Q68CP9 1835 aa13.06□□□□□ -0.32
RABGGTA-216ENST00000560243 TTC28Q96AY4 2481 aa13.05□□□□□ -0.32
RABGGTA-216ENST00000560243 A0A087WWV3 80 aa13.05□□□□□ -0.32
RABGGTA-216ENST00000560243 POTEMA6NI47 508 aa13.05□□□□□ -0.32
RABGGTA-216ENST00000560243 MAFO75444 373 aaPredicted RBP13.05□□□□□ -0.32
RABGGTA-216ENST00000560243 FGFR4P22455 802 aa13.05□□□□□ -0.32
RABGGTA-216ENST00000560243 GATMP50440 423 aa13.05□□□□□ -0.32
RABGGTA-216ENST00000560243 TOB1P50616 345 aaPredicted RBP13.05□□□□□ -0.32
RABGGTA-216ENST00000560243 GPC3P51654 580 aa13.05□□□□□ -0.32
RABGGTA-216ENST00000560243 KSR1Q8IVT5 923 aa13.05□□□□□ -0.32
RABGGTA-216ENST00000560243 TPH2Q8IWU9 490 aa13.05□□□□□ -0.32
RABGGTA-216ENST00000560243 C4orf19Q8IY42 314 aa13.05□□□□□ -0.32
RABGGTA-216ENST00000560243 ADAM2Q99965 735 aa13.05□□□□□ -0.32
RABGGTA-216ENST00000560243 HSD17B14Q9BPX1 270 aa13.05□□□□□ -0.32
RABGGTA-216ENST00000560243 BMP2KQ9NSY1 1161 aaPredicted RBP13.05□□□□□ -0.32
RABGGTA-216ENST00000560243 GTF3C3Q9Y5Q9 886 aa13.05□□□□□ -0.32
RABGGTA-216ENST00000560243 XIRP2A4UGR9 3374 aa13.05□□□□□ -0.32
RABGGTA-216ENST00000560243 SPTBN5Q9NRC6 3674 aaKnown RBP13.05□□□□□ -0.32
RABGGTA-216ENST00000560243 GPR182O15218 404 aa13.04□□□□□ -0.32
RABGGTA-216ENST00000560243 DGKIO75912 1065 aa13.04□□□□□ -0.32
RABGGTA-216ENST00000560243 LINC00271P0C7V0 271 aa13.04□□□□□ -0.32
RABGGTA-216ENST00000560243 DARSP14868 501 aaKnown RBP13.04□□□□□ -0.32
RABGGTA-216ENST00000560243 POU3F3P20264 500 aaPredicted RBP13.04□□□□□ -0.32
RABGGTA-216ENST00000560243 EIF4BP23588 611 aaKnown RBP13.04□□□□□ -0.32
RABGGTA-216ENST00000560243 U2AF2P26368 475 aaKnown RBP eCLIP13.04□□□□□ -0.322e-6■■■□□ 18.7
RABGGTA-216ENST00000560243 GJB2P29033 226 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms