RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 TAAR1Q96RJ0 339 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 FIZ1Q96SL8 496 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 IWS1Q96ST2 819 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 ANKZF1Q9H8Y5 726 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 PXMP2Q9NR77 195 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 HOMER2Q9NSB8 354 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 DUSP10Q9Y6W6 482 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 ZHX2Q9Y6X8 837 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 ZBTB39O15060 712 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 DKC1O60832 514 aaKnown RBP eCLIP12.35□□□□□ -0.43
CLPX-204ENST00000559152 PTPRAP18433 802 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 SLC30A10Q6XR72 485 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 NLRX1Q86UT6 975 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 C4orf19Q8IY42 314 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 CAGE1Q8TC20 777 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 ZFP91Q96JP5 570 aaPredicted RBP12.35□□□□□ -0.43
CLPX-204ENST00000559152 DRC1Q96MC2 740 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 PDCD2LQ9BRP1 358 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 STRA6Q9BX79 667 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 AGPAT3Q9NRZ7 376 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 DMAC2Q9NW81 257 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 SNX12Q9UMY4 172 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 SCAF8Q9UPN6 1271 aaKnown RBP12.35□□□□□ -0.43
CLPX-204ENST00000559152 ZMYM2Q9UBW7 1377 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 LOXHD1Q8IVV2 1947 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 ATP8B3O60423 1300 aa12.35□□□□□ -0.43
CLPX-204ENST00000559152 WDR64B1ANS9 1081 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 PPP1R37O75864 691 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 EIF2AK2P19525 551 aaKnown RBP12.34□□□□□ -0.43
CLPX-204ENST00000559152 SLC9A1P19634 815 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 CCND2P30279 289 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 CASP4P49662 377 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 RARRES1P49788 294 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 PSMC5P62195 406 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 RASSF7Q02833 373 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 ITIH3Q06033 890 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 GABPB1Q06547 395 aaPredicted RBP12.34□□□□□ -0.43
CLPX-204ENST00000559152 KCNA1Q09470 495 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 ITGB3BPQ13352 177 aaPredicted RBP12.34□□□□□ -0.43
CLPX-204ENST00000559152 ZC2HC1CQ53FD0 456 aaPredicted RBP12.34□□□□□ -0.43
CLPX-204ENST00000559152 WDR93Q6P2C0 686 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 FAM133AQ8N9E0 248 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 IL31RAQ8NI17 732 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 WRNIP1Q96S55 665 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.34□□□□□ -0.43
CLPX-204ENST00000559152 EPC1Q9H2F5 836 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 RNF146Q9NTX7 359 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 GCNT4Q9P109 453 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 HDAC6Q9UBN7 1215 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 BRCA1P38398 1863 aaKnown RBP12.34□□□□□ -0.43
CLPX-204ENST00000559152 TARSL2A2RTX5 802 aaKnown RBP12.34□□□□□ -0.43
CLPX-204ENST00000559152 BTNL10A8MVZ5 291 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 CCDC172P0C7W6 258 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 MYCLP12524 364 aaPredicted RBP12.34□□□□□ -0.43
CLPX-204ENST00000559152 PLS3P13797 630 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 YWHABP31946 246 aaKnown RBP12.34□□□□□ -0.43
CLPX-204ENST00000559152 PRKCIP41743 596 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 COG2Q14746 738 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 IFI16Q16666 785 aaKnown RBP12.34□□□□□ -0.43
CLPX-204ENST00000559152 NSMFQ6X4W1 530 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 GPRASP2Q96D09 838 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 CDHR1Q96JP9 859 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 ACCSQ96QU6 501 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 ST6GALNAC4Q9H4F1 302 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 ANKEF1Q9NU02 776 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 PKD2L1Q9P0L9 805 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 RNF14Q9UBS8 474 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 ADAMTS5Q9UNA0 930 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 HYOU1Q9Y4L1 999 aa12.34□□□□□ -0.43
CLPX-204ENST00000559152 SMCHD1A6NHR9 2005 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 K7ENM7 598 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 ATP2A1O14983 1001 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 STAM2O75886 525 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 GFPT2O94808 682 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 MOCS3O95396 460 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 FERP16591 822 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 RFX1P22670 979 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 DSG3P32926 999 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 NAP1L1P55209 391 aaKnown RBP12.33□□□□□ -0.44
CLPX-204ENST00000559152 FAM193AP78312 1265 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 CETN1Q12798 172 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 MAPK7Q13164 816 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 NAB2Q15742 525 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 SUPT20HL1Q3ZLR7 823 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 ZNF746Q6NUN9 644 aaPredicted RBP12.33□□□□□ -0.44
CLPX-204ENST00000559152 DPY19L2P1Q6NXN4 242 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 IRF2BP2Q7Z5L9 587 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 C12orf56Q8IXR9 622 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 VTI1AQ96AJ9 217 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 ATG4CQ96DT6 458 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 SENP7Q9BQF6 1050 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 SGIP1Q9BQI5 828 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 POLD4Q9HCU8 107 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 TMOD4Q9NZQ9 345 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 CAPN6Q9Y6Q1 641 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 EXOC3O60645 756 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 N4BP1O75113 896 aaKnown RBP12.33□□□□□ -0.44
CLPX-204ENST00000559152 KRT13P13646 458 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 ARID5AQ03989 594 aa12.33□□□□□ -0.44
CLPX-204ENST00000559152 GPS2Q13227 327 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms