RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 GOLPH3LQ9H4A5 285 aa12.17□□□□□ -0.46
TPM1-217ENST00000559108 GPRC5CQ9NQ84 441 aa12.17□□□□□ -0.46
TPM1-217ENST00000559108 ANKEF1Q9NU02 776 aa12.17□□□□□ -0.46
TPM1-217ENST00000559108 GBF1Q92538 1859 aa12.17□□□□□ -0.46
TPM1-217ENST00000559108 MICAL3Q7RTP6 2002 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 NPHP3-ACAD11A0A0J9YXS1 232 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 SMIM35A0A1B0GVV1 85 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 TLR3O15455 904 aaKnown RBP12.16□□□□□ -0.46
TPM1-217ENST00000559108 NBNO60934 754 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 TIMP1P01033 207 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 VTNP04004 478 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 IQCF3P0C7M6 154 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 CSF2RAP15509 400 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 THPOP40225 353 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 ME1P48163 572 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 SLC12A3P55017 1021 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 MAPK7Q13164 816 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 EMC2Q15006 297 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 TPRNQ4KMQ1 711 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 RESP18Q5W5W9 173 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 HAUS3Q68CZ6 603 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 EFCAB12Q6NXP0 572 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 DAW1Q8N136 415 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 KCNG4Q8TDN1 519 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 BSNDQ8WZ55 320 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 TMEM143Q96AN5 459 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 MTRQ99707 1265 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 SEZ6LQ9BYH1 1024 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 RAB34Q9BZG1 259 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 NRBP2Q9NSY0 501 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 DBR1Q9UK59 544 aaKnown RBP12.16□□□□□ -0.46
TPM1-217ENST00000559108 CFAP45Q9UL16 551 aa12.16□□□□□ -0.46
TPM1-217ENST00000559108 PITPNM1O00562 1244 aa12.15□□□□□ -0.46
TPM1-217ENST00000559108 USO1O60763 962 aaKnown RBP12.15□□□□□ -0.46
TPM1-217ENST00000559108 GADD45BO75293 160 aaPredicted RBP12.15□□□□□ -0.46
TPM1-217ENST00000559108 GPR32O75388 356 aa12.15□□□□□ -0.46
TPM1-217ENST00000559108 EYA4O95677 639 aa12.15□□□□□ -0.46
TPM1-217ENST00000559108 UBA7P41226 1012 aa12.15□□□□□ -0.46
TPM1-217ENST00000559108 MAGEA10P43363 369 aaPredicted RBP12.15□□□□□ -0.46
TPM1-217ENST00000559108 MDM2Q00987 491 aaPredicted RBP12.15□□□□□ -0.46
TPM1-217ENST00000559108 TBC1D8BQ0IIM8 1120 aa12.15□□□□□ -0.46
TPM1-217ENST00000559108 MCM6Q14566 821 aa12.15□□□□□ -0.46
TPM1-217ENST00000559108 ARSHQ5FYA8 562 aa12.15□□□□□ -0.46
TPM1-217ENST00000559108 FAM26DQ5JW98 314 aa12.15□□□□□ -0.46
TPM1-217ENST00000559108 PADI6Q6TGC4 694 aa12.15□□□□□ -0.46
TPM1-217ENST00000559108 LRRC8DQ7L1W4 858 aa12.15□□□□□ -0.46
TPM1-217ENST00000559108 MAEAQ7L5Y9 396 aa12.15□□□□□ -0.46
TPM1-217ENST00000559108 RPAINQ86UA6 219 aa12.15□□□□□ -0.46
TPM1-217ENST00000559108 METTL13Q8N6R0 699 aa12.15□□□□□ -0.46
TPM1-217ENST00000559108 PDILTQ8N807 584 aa12.15□□□□□ -0.46
TPM1-217ENST00000559108 ASAP3Q8TDY4 903 aa12.15□□□□□ -0.46
TPM1-217ENST00000559108 NACC1Q96RE7 527 aa12.15□□□□□ -0.46
TPM1-217ENST00000559108 ADAMTS10Q9H324 1103 aa12.15□□□□□ -0.46
TPM1-217ENST00000559108 SUGCTQ9HAC7 445 aa12.15□□□□□ -0.46
TPM1-217ENST00000559108 NOD1Q9Y239 953 aa12.15□□□□□ -0.46
TPM1-217ENST00000559108 HPSEQ9Y251 543 aa12.15□□□□□ -0.46
TPM1-217ENST00000559108 KDM3AQ9Y4C1 1321 aa12.14□□□□□ -0.47
TPM1-217ENST00000559108 COL4A6Q14031 1691 aa12.14□□□□□ -0.47
TPM1-217ENST00000559108 FAM237AA0A1B0GTK4 181 aa12.14□□□□□ -0.47
TPM1-217ENST00000559108 RSPH10B2B2RC85 870 aa12.14□□□□□ -0.47
TPM1-217ENST00000559108 PLA2G4BP0C869 781 aa12.14□□□□□ -0.47
TPM1-217ENST00000559108 RSPH10BP0C881 870 aa12.14□□□□□ -0.47
TPM1-217ENST00000559108 GNAT1P11488 350 aa12.14□□□□□ -0.47
TPM1-217ENST00000559108 XRCC6P12956 609 aaKnown RBP eCLIP12.14□□□□□ -0.47
TPM1-217ENST00000559108 RAG1P15918 1043 aa12.14□□□□□ -0.47
TPM1-217ENST00000559108 SELPP16109 830 aa12.14□□□□□ -0.47
TPM1-217ENST00000559108 MUTP22033 750 aa12.14□□□□□ -0.47
TPM1-217ENST00000559108 POLGP54098 1239 aaPredicted RBP12.14□□□□□ -0.47
TPM1-217ENST00000559108 MRPS6P82932 125 aaKnown RBP12.14□□□□□ -0.47
TPM1-217ENST00000559108 CACNB1Q02641 598 aaPredicted RBP12.14□□□□□ -0.47
TPM1-217ENST00000559108 KIZQ2M2Z5 673 aa12.14□□□□□ -0.47
TPM1-217ENST00000559108 MFSD5Q6N075 450 aa12.14□□□□□ -0.47
TPM1-217ENST00000559108 RINT1Q6NUQ1 792 aa12.14□□□□□ -0.47
TPM1-217ENST00000559108 TAF2Q6P1X5 1199 aa12.14□□□□□ -0.47
TPM1-217ENST00000559108 C1orf186Q6ZWK4 172 aa12.14□□□□□ -0.47
TPM1-217ENST00000559108 RAD54LQ92698 747 aa12.14□□□□□ -0.47
TPM1-217ENST00000559108 PRO3102Q9H379 93 aa12.14□□□□□ -0.47
TPM1-217ENST00000559108 AGO3Q9H9G7 860 aaKnown RBP12.14□□□□□ -0.47
TPM1-217ENST00000559108 ATP6V1DQ9Y5K8 247 aa12.14□□□□□ -0.47
TPM1-217ENST00000559108 CDY2AQ9Y6F7 541 aa12.14□□□□□ -0.47
TPM1-217ENST00000559108 A0A1B0GVL5 298 aa12.13□□□□□ -0.47
TPM1-217ENST00000559108 MAGEB2O15479 319 aa12.13□□□□□ -0.47
TPM1-217ENST00000559108 DKC1O60832 514 aaKnown RBP eCLIP12.13□□□□□ -0.47
TPM1-217ENST00000559108 CSDE1O75534 798 aaKnown RBP12.13□□□□□ -0.47
TPM1-217ENST00000559108 EDN1P05305 212 aa12.13□□□□□ -0.47
TPM1-217ENST00000559108 ACRP10323 421 aa12.13□□□□□ -0.47
TPM1-217ENST00000559108 PFKFB1P16118 471 aa12.13□□□□□ -0.47
TPM1-217ENST00000559108 CYP11B2P19099 503 aa12.13□□□□□ -0.47
TPM1-217ENST00000559108 GLRA2P23416 452 aa12.13□□□□□ -0.47
TPM1-217ENST00000559108 CASP1P29466 404 aa12.13□□□□□ -0.47
TPM1-217ENST00000559108 ARL2P36404 184 aa12.13□□□□□ -0.47
TPM1-217ENST00000559108 RFC5P40937 340 aa12.13□□□□□ -0.47
TPM1-217ENST00000559108 GPC3P51654 580 aa12.13□□□□□ -0.47
TPM1-217ENST00000559108 RAD51AP2Q09MP3 1159 aa12.13□□□□□ -0.47
TPM1-217ENST00000559108 DHX8Q14562 1220 aaKnown RBP12.13□□□□□ -0.47
TPM1-217ENST00000559108 LPIN1Q14693 890 aa12.13□□□□□ -0.47
TPM1-217ENST00000559108 ADALQ6DHV7 355 aa12.13□□□□□ -0.47
TPM1-217ENST00000559108 SYT2Q8N9I0 419 aaPredicted RBP12.13□□□□□ -0.47
TPM1-217ENST00000559108 CAGE1Q8TC20 777 aa12.13□□□□□ -0.47
TPM1-217ENST00000559108 STAMQ92783 540 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms