RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 DLG4P78352 724 aa3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 ZNF200P98182 395 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 MAP3K12Q12852 859 aa3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 TUBB8Q3ZCM7 444 aa3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 ARHGAP29Q52LW3 1261 aa3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 HABP4Q5JVS0 413 aaKnown RBP3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 IQSEC1Q6DN90 963 aa3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 CIAPIN1Q6FI81 312 aa3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 PRR23BQ6ZRT6 265 aa3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 TTLL7Q6ZT98 887 aa3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 SYDE1Q6ZW31 735 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 FKBP9P1Q75LS8 142 aa3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 AMOTL1Q8IY63 956 aa3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 PAF1Q8N7H5 531 aa3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 SMC1BQ8NDV3 1235 aa3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 DPF3Q92784 378 aa3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 NAA15Q9BXJ9 866 aaKnown RBP3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 PRDM11Q9NQV5 511 aa3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 KCNH7Q9NS40 1196 aa3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 SPTLC3Q9NUV7 552 aa3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 H2AFY2Q9P0M6 372 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 SAMD15Q9P1V8 674 aa3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 ARHGAP28Q9P2N2 729 aa3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 CNOT6Q9ULM6 557 aaKnown RBP3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 DNM3Q9UQ16 869 aa3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 APOBEC2Q9Y235 224 aaKnown RBP3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 IPPQ9Y573 584 aa3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 PCDHGB3Q9Y5G1 929 aa3.94□□□□□ -1.78
HMGB1P14-201ENST00000557424 ANO9A1A5B4 782 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 SLC26A4O43511 780 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 ZEB2O60315 1214 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 H2AFYO75367 372 aaKnown RBP3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 SNUPNO95149 360 aaKnown RBP3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 ZRANB2O95218 330 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 CCND1P24385 295 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 FXR1P51114 621 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 USP14P54578 494 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 ZNF280AP59817 542 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 DSG1Q02413 1049 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 ADCY1Q08828 1119 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 CHAF1AQ13111 956 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 ZNF267Q14586 743 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 SAFBQ15424 915 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 MINDY4Q4G0A6 757 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 ERICH6BQ5W0A0 696 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 ARHGAP36Q6ZRI8 547 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 TOGARAM2Q6ZUX3 1019 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 HDGFL2Q7Z4V5 671 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 FAM124AQ86V42 546 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 LDHDQ86WU2 507 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 CMTR2Q8IYT2 770 aaKnown RBP3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 IGSF22Q8N9C0 903 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 C1orf162Q8NEQ5 155 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 FBXO41Q8TF61 875 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 CHTF18Q8WVB6 975 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 RUNDC1Q96C34 613 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 MCOLN1Q9GZU1 580 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 MS4A5Q9H3V2 200 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 TCF7L1Q9HCS4 588 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 EMC7Q9NPA0 242 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 PLCB1Q9NQ66 1216 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 THG1LQ9NWX6 298 aaKnown RBP3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 SAGE1Q9NXZ1 904 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 USP36Q9P275 1121 aaKnown RBP3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 MBD1Q9UIS9 605 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 FBXO10Q9UK96 956 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 ANKRD6Q9Y2G4 727 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 SPEF1Q9Y4P9 236 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 PPP2R3BQ9Y5P8 575 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 CARMIL2Q6F5E8 1435 aa3.93□□□□□ -1.78
HMGB1P14-201ENST00000557424 TCRBV5S2A0A599 114 aa3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 PRAMEF25A6NGN4 478 aa3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 ZNF561-AS1K7EIQ3 104 aa3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 CBX4O00257 560 aa3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 TRAF5O00463 557 aa3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 SGSM2O43147 1006 aa3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 BUB1BO60566 1050 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 MSCO60682 206 aa3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 ULK1O75385 1050 aa3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 LTFP02788 710 aa3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 ENO2P09104 434 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 SLC5A1P13866 664 aa3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 PDE6AP16499 860 aa3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 KRT15P19012 456 aa3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 CEBPAP49715 358 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 IRF9Q00978 393 aa3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 STK3Q13188 491 aa3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 KLF1Q13351 362 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 TUSC3Q13454 348 aa3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 SLC4A8Q2Y0W8 1093 aa3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 KRTAP19-4Q3LI73 84 aa3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 ZNF568Q3ZCX4 644 aa3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 ATP13A4Q4VNC1 1196 aa3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 GJC2Q5T442 439 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 TCERG1LQ5VWI1 586 aa3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 BTBD8Q5XKL5 378 aa3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 C1orf228Q6PIY5 440 aa3.92□□□□□ -1.78
HMGB1P14-201ENST00000557424 B3GNT9Q6UX72 402 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms