RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 MAP7D2Q96T17 732 aa14.2□□□□□ -0.14
SNX6-207ENST00000556303 C11orf84Q9BUA3 381 aaPredicted RBP14.2□□□□□ -0.14
SNX6-207ENST00000556303 LMAN2LQ9H0V9 348 aa14.2□□□□□ -0.14
SNX6-207ENST00000556303 BRMS1Q9HCU9 246 aa14.2□□□□□ -0.14
SNX6-207ENST00000556303 RGS18Q9NS28 235 aa14.2□□□□□ -0.14
SNX6-207ENST00000556303 KCNJ14Q9UNX9 436 aa14.2□□□□□ -0.14
SNX6-207ENST00000556303 PPME1Q9Y570 386 aa14.2□□□□□ -0.14
SNX6-207ENST00000556303 MYO7AQ13402 2215 aa14.19□□□□□ -0.14
SNX6-207ENST00000556303 LINC00271P0C7V0 271 aa14.19□□□□□ -0.14
SNX6-207ENST00000556303 BMP1P13497 986 aa14.19□□□□□ -0.14
SNX6-207ENST00000556303 NEK4P51957 841 aa14.19□□□□□ -0.14
SNX6-207ENST00000556303 NFX1Q12986 1120 aaKnown RBP14.19□□□□□ -0.14
SNX6-207ENST00000556303 PPP2R5CQ13362 524 aa14.19□□□□□ -0.14
SNX6-207ENST00000556303 GPM6BQ13491 265 aa14.19□□□□□ -0.14
SNX6-207ENST00000556303 BTG3Q14201 252 aaPredicted RBP14.19□□□□□ -0.14
SNX6-207ENST00000556303 TARBP2Q15633 366 aaKnown RBP14.19□□□□□ -0.14
SNX6-207ENST00000556303 ME3Q16798 604 aa14.19□□□□□ -0.14
SNX6-207ENST00000556303 LETM2Q2VYF4 491 aa14.19□□□□□ -0.14
SNX6-207ENST00000556303 KRT40Q6A162 431 aa14.19□□□□□ -0.14
SNX6-207ENST00000556303 SLC24A5Q71RS6 500 aa14.19□□□□□ -0.14
SNX6-207ENST00000556303 EXOC8Q8IYI6 725 aa14.19□□□□□ -0.14
SNX6-207ENST00000556303 P2RX5Q93086 422 aa14.19□□□□□ -0.14
SNX6-207ENST00000556303 JPH2Q9BR39 696 aaPredicted RBP14.19□□□□□ -0.14
SNX6-207ENST00000556303 TMX1Q9H3N1 280 aa14.19□□□□□ -0.14
SNX6-207ENST00000556303 ELAC1Q9H777 363 aaKnown RBP14.19□□□□□ -0.14
SNX6-207ENST00000556303 KCNMB3Q9NPA1 279 aa14.19□□□□□ -0.14
SNX6-207ENST00000556303 ST3GAL5Q9UNP4 418 aa14.19□□□□□ -0.14
SNX6-207ENST00000556303 GINS2Q9Y248 185 aa14.19□□□□□ -0.14
SNX6-207ENST00000556303 NOC2LQ9Y3T9 749 aaKnown RBP14.19□□□□□ -0.14
SNX6-207ENST00000556303 LOXHD1Q8IVV2 1947 aa14.19□□□□□ -0.14
SNX6-207ENST00000556303 RALGAPA2Q2PPJ7 1873 aa14.18□□□□□ -0.14
SNX6-207ENST00000556303 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.18□□□□□ -0.14
SNX6-207ENST00000556303 DENND3A2RUS2 1198 aa14.18□□□□□ -0.14
SNX6-207ENST00000556303 TNFRSF10AO00220 468 aa14.18□□□□□ -0.14
SNX6-207ENST00000556303 CHMP2AO43633 222 aa14.18□□□□□ -0.14
SNX6-207ENST00000556303 EIF4BP23588 611 aaKnown RBP14.18□□□□□ -0.14
SNX6-207ENST00000556303 PSMC5P62195 406 aa14.18□□□□□ -0.14
SNX6-207ENST00000556303 FAM189BP81408 668 aa14.18□□□□□ -0.14
SNX6-207ENST00000556303 TBC1D8BQ0IIM8 1120 aa14.18□□□□□ -0.14
SNX6-207ENST00000556303 KIZQ2M2Z5 673 aa14.18□□□□□ -0.14
SNX6-207ENST00000556303 SLFN12Q8IYM2 578 aa14.18□□□□□ -0.14
SNX6-207ENST00000556303 ADAMTS19Q8TE59 1207 aa14.18□□□□□ -0.14
SNX6-207ENST00000556303 TMEM40Q8WWA1 233 aa14.18□□□□□ -0.14
SNX6-207ENST00000556303 ADAMTS10Q9H324 1103 aa14.18□□□□□ -0.14
SNX6-207ENST00000556303 CDHR5Q9HBB8 845 aa14.18□□□□□ -0.14
SNX6-207ENST00000556303 LRFN2Q9ULH4 789 aa14.18□□□□□ -0.14
SNX6-207ENST00000556303 AKT3Q9Y243 479 aa14.18□□□□□ -0.14
SNX6-207ENST00000556303 PCDHB7Q9Y5E2 793 aa14.18□□□□□ -0.14
SNX6-207ENST00000556303 IGKV6-21A0A0C4DH24 114 aa14.17□□□□□ -0.14
SNX6-207ENST00000556303 CCNT1O60563 726 aaKnown RBP14.17□□□□□ -0.14
SNX6-207ENST00000556303 BAG4O95429 457 aaKnown RBP14.17□□□□□ -0.14
SNX6-207ENST00000556303 VTNP04004 478 aa14.17□□□□□ -0.14
SNX6-207ENST00000556303 P4HBP07237 508 aaKnown RBP14.17□□□□□ -0.14
SNX6-207ENST00000556303 FDPSP14324 419 aaKnown RBP14.17□□□□□ -0.14
SNX6-207ENST00000556303 CTNNB1P35222 781 aa14.17□□□□□ -0.14
SNX6-207ENST00000556303 KRT2P35908 639 aa14.17□□□□□ -0.14
SNX6-207ENST00000556303 DNM2P50570 870 aa14.17□□□□□ -0.14
SNX6-207ENST00000556303 NLRP11P59045 1033 aaKnown RBP14.17□□□□□ -0.14
SNX6-207ENST00000556303 UGCGQ16739 394 aa14.17□□□□□ -0.14
SNX6-207ENST00000556303 PIK3AP1Q6ZUJ8 805 aa14.17□□□□□ -0.14
SNX6-207ENST00000556303 TRMT1LQ7Z2T5 733 aaKnown RBP14.17□□□□□ -0.14
SNX6-207ENST00000556303 NSUN7Q8NE18 718 aaKnown RBP14.17□□□□□ -0.14
SNX6-207ENST00000556303 CEP89Q96ST8 783 aa14.17□□□□□ -0.14
SNX6-207ENST00000556303 UHRF1Q96T88 793 aaPredicted RBP14.17□□□□□ -0.14
SNX6-207ENST00000556303 OSMRQ99650 979 aa14.17□□□□□ -0.14
SNX6-207ENST00000556303 COL4A4P53420 1690 aaPredicted RBP14.17□□□□□ -0.14
SNX6-207ENST00000556303 C9IYK1 514 aa14.16□□□□□ -0.14
SNX6-207ENST00000556303 HOXA2O43364 376 aa14.16□□□□□ -0.14
SNX6-207ENST00000556303 SLC37A4O43826 429 aa14.16□□□□□ -0.14
SNX6-207ENST00000556303 STBD1O95210 358 aa14.16□□□□□ -0.14
SNX6-207ENST00000556303 ZSCAN20P17040 1043 aaPredicted RBP14.16□□□□□ -0.14
SNX6-207ENST00000556303 QARSP47897 775 aaKnown RBP14.16□□□□□ -0.14
SNX6-207ENST00000556303 GPC3P51654 580 aa14.16□□□□□ -0.14
SNX6-207ENST00000556303 CLCN3P51790 818 aa14.16□□□□□ -0.14
SNX6-207ENST00000556303 TFF2Q03403 129 aa14.16□□□□□ -0.14
SNX6-207ENST00000556303 TRIM29Q14134 588 aa14.16□□□□□ -0.14
SNX6-207ENST00000556303 TMEM266Q2M3C6 531 aa14.16□□□□□ -0.14
SNX6-207ENST00000556303 PUS10Q3MIT2 529 aaKnown RBP14.16□□□□□ -0.14
SNX6-207ENST00000556303 FAM228AQ86W67 206 aa14.16□□□□□ -0.14
SNX6-207ENST00000556303 BANK1Q8NDB2 785 aa14.16□□□□□ -0.14
SNX6-207ENST00000556303 RSPH1Q8WYR4 309 aa14.16□□□□□ -0.14
SNX6-207ENST00000556303 TNFRSF25Q93038 417 aa14.16□□□□□ -0.14
SNX6-207ENST00000556303 GJA10Q969M2 543 aa14.16□□□□□ -0.14
SNX6-207ENST00000556303 ADAM2Q99965 735 aa14.16□□□□□ -0.14
SNX6-207ENST00000556303 INO80BQ9C086 356 aaPredicted RBP14.16□□□□□ -0.14
SNX6-207ENST00000556303 NSUN3Q9H649 340 aaKnown RBP14.16□□□□□ -0.14
SNX6-207ENST00000556303 TMEM161AQ9NX61 479 aa14.16□□□□□ -0.14
SNX6-207ENST00000556303 VAV3Q9UKW4 847 aa14.16□□□□□ -0.14
SNX6-207ENST00000556303 LIMCH1Q9UPQ0 1083 aa14.16□□□□□ -0.14
SNX6-207ENST00000556303 NLRC5Q86WI3 1866 aa14.16□□□□□ -0.14
SNX6-207ENST00000556303 MARCH6O60337 910 aa14.15□□□□□ -0.14
SNX6-207ENST00000556303 MGEA5O60502 916 aa14.15□□□□□ -0.14
SNX6-207ENST00000556303 MAFO75444 373 aaPredicted RBP14.15□□□□□ -0.14
SNX6-207ENST00000556303 MMP1P03956 469 aa14.15□□□□□ -0.14
SNX6-207ENST00000556303 DARSP14868 501 aaKnown RBP14.15□□□□□ -0.14
SNX6-207ENST00000556303 DSC3Q14574 896 aa14.15□□□□□ -0.14
SNX6-207ENST00000556303 COL19A1Q14993 1142 aa14.15□□□□□ -0.14
SNX6-207ENST00000556303 EPHA7Q15375 998 aa14.15□□□□□ -0.14
SNX6-207ENST00000556303 CSPP1Q1MSJ5 1256 aa14.15□□□□□ -0.14
SNX6-207ENST00000556303 LEXMQ3ZCV2 418 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms