RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 ST3GAL5Q9UNP4 418 aa14.34□□□□□ -0.11
HNRNPC-221ENST00000555883 PLAGL2Q9UPG8 496 aa14.34□□□□□ -0.11
HNRNPC-221ENST00000555883 PCDHB7Q9Y5E2 793 aa14.34□□□□□ -0.11
HNRNPC-221ENST00000555883 MRPL42Q9Y6G3 142 aaKnown RBP14.34□□□□□ -0.11
HNRNPC-221ENST00000555883 DENND3A2RUS2 1198 aa14.33□□□□□ -0.12
HNRNPC-221ENST00000555883 MGEA5O60502 916 aa14.33□□□□□ -0.12
HNRNPC-221ENST00000555883 NEFLP07196 543 aa14.33□□□□□ -0.12
HNRNPC-221ENST00000555883 CDC42EP1Q00587 391 aa14.33□□□□□ -0.12
HNRNPC-221ENST00000555883 PRKCEQ02156 737 aa14.33□□□□□ -0.12
HNRNPC-221ENST00000555883 KIZQ2M2Z5 673 aa14.33□□□□□ -0.12
HNRNPC-221ENST00000555883 PTCRAQ6ISU1 281 aaPredicted RBP14.33□□□□□ -0.12
HNRNPC-221ENST00000555883 KRT25Q7Z3Z0 450 aa14.33□□□□□ -0.12
HNRNPC-221ENST00000555883 FAM228AQ86W67 206 aa14.33□□□□□ -0.12
HNRNPC-221ENST00000555883 METTL13Q8N6R0 699 aa14.33□□□□□ -0.12
HNRNPC-221ENST00000555883 PPP2R3CQ969Q6 453 aa14.33□□□□□ -0.12
HNRNPC-221ENST00000555883 ADAM2Q99965 735 aa14.33□□□□□ -0.12
HNRNPC-221ENST00000555883 UPF3BQ9BZI7 483 aaKnown RBP14.33□□□□□ -0.12
HNRNPC-221ENST00000555883 PDRG1Q9NUG6 133 aa14.33□□□□□ -0.12
HNRNPC-221ENST00000555883 TMEM161AQ9NX61 479 aa14.33□□□□□ -0.12
HNRNPC-221ENST00000555883 PRKAG3Q9UGI9 489 aa14.33□□□□□ -0.12
HNRNPC-221ENST00000555883 GINS2Q9Y248 185 aa14.33□□□□□ -0.12
HNRNPC-221ENST00000555883 STK36Q9NRP7 1315 aa14.33□□□□□ -0.12
HNRNPC-221ENST00000555883 PPFIA3O75145 1194 aa14.32□□□□□ -0.12
HNRNPC-221ENST00000555883 VTNP04004 478 aa14.32□□□□□ -0.12
HNRNPC-221ENST00000555883 UBE3AQ05086 875 aa14.32□□□□□ -0.12
HNRNPC-221ENST00000555883 CAMK1Q14012 370 aa14.32□□□□□ -0.12
HNRNPC-221ENST00000555883 DSC3Q14574 896 aa14.32□□□□□ -0.12
HNRNPC-221ENST00000555883 NONOQ15233 471 aaKnown RBP eCLIP14.32□□□□□ -0.128e-7■□□□□ 9.3
HNRNPC-221ENST00000555883 TARBP2Q15633 366 aaKnown RBP14.32□□□□□ -0.12
HNRNPC-221ENST00000555883 CSPP1Q1MSJ5 1256 aa14.32□□□□□ -0.12
HNRNPC-221ENST00000555883 EFCAB12Q6NXP0 572 aa14.32□□□□□ -0.12
HNRNPC-221ENST00000555883 ETNPPLQ8TBG4 499 aa14.32□□□□□ -0.12
HNRNPC-221ENST00000555883 OSMRQ99650 979 aa14.32□□□□□ -0.12
HNRNPC-221ENST00000555883 NIFKQ9BYG3 293 aaKnown RBP14.32□□□□□ -0.12
HNRNPC-221ENST00000555883 ADAMTS10Q9H324 1103 aa14.32□□□□□ -0.12
HNRNPC-221ENST00000555883 UNC45AQ9H3U1 944 aa14.32□□□□□ -0.12
HNRNPC-221ENST00000555883 AAASQ9NRG9 546 aa14.32□□□□□ -0.12
HNRNPC-221ENST00000555883 BRWD1Q9NSI6 2320 aa14.32□□□□□ -0.12
HNRNPC-221ENST00000555883 TCF20Q9UGU0 1960 aaKnown RBP14.31□□□□□ -0.12
HNRNPC-221ENST00000555883 FSD2A1L4K1 749 aa14.31□□□□□ -0.12
HNRNPC-221ENST00000555883 HOXA2O43364 376 aa14.31□□□□□ -0.12
HNRNPC-221ENST00000555883 EIF5BO60841 1220 aaKnown RBP14.31□□□□□ -0.12
HNRNPC-221ENST00000555883 ITGB1P05556 798 aa14.31□□□□□ -0.12
HNRNPC-221ENST00000555883 GCFC2P16383 781 aaKnown RBP14.31□□□□□ -0.12
HNRNPC-221ENST00000555883 XBP1P17861 261 aa14.31□□□□□ -0.12
HNRNPC-221ENST00000555883 COL9A1P20849 921 aa14.31□□□□□ -0.12
HNRNPC-221ENST00000555883 EIF4BP23588 611 aaKnown RBP14.31□□□□□ -0.12
HNRNPC-221ENST00000555883 LTBRP36941 435 aa14.31□□□□□ -0.12
HNRNPC-221ENST00000555883 CLCN3P51790 818 aa14.31□□□□□ -0.12
HNRNPC-221ENST00000555883 HYAL1Q12794 435 aa14.31□□□□□ -0.12
HNRNPC-221ENST00000555883 ANKRD1Q15327 319 aa14.31□□□□□ -0.12
HNRNPC-221ENST00000555883 XKR3Q5GH77 459 aa14.31□□□□□ -0.12
HNRNPC-221ENST00000555883 PPP4R3AQ6IN85 833 aa14.31□□□□□ -0.12
HNRNPC-221ENST00000555883 GJD3Q8N144 294 aa14.31□□□□□ -0.12
HNRNPC-221ENST00000555883 SPPL3Q8TCT6 385 aa14.31□□□□□ -0.12
HNRNPC-221ENST00000555883 RSPH1Q8WYR4 309 aa14.31□□□□□ -0.12
HNRNPC-221ENST00000555883 UIMC1Q96RL1 719 aa14.31□□□□□ -0.12
HNRNPC-221ENST00000555883 PHF20Q9BVI0 1012 aa14.31□□□□□ -0.12
HNRNPC-221ENST00000555883 ALG13Q9NP73 1137 aaKnown RBP14.31□□□□□ -0.12
HNRNPC-221ENST00000555883 AKT3Q9Y243 479 aa14.31□□□□□ -0.12
HNRNPC-221ENST00000555883 IGKV6-21A0A0C4DH24 114 aa14.3□□□□□ -0.12
HNRNPC-221ENST00000555883 PI4K2BG5E9Z4 385 aa14.3□□□□□ -0.12
HNRNPC-221ENST00000555883 H3BQ06 376 aaPredicted RBP14.3□□□□□ -0.12
HNRNPC-221ENST00000555883 PFKFB2O60825 505 aa14.3□□□□□ -0.12
HNRNPC-221ENST00000555883 TDP2O95551 362 aa14.3□□□□□ -0.12
HNRNPC-221ENST00000555883 IL9P15248 144 aa14.3□□□□□ -0.12
HNRNPC-221ENST00000555883 GPC3P51654 580 aa14.3□□□□□ -0.12
HNRNPC-221ENST00000555883 NLRP11P59045 1033 aaKnown RBP14.3□□□□□ -0.12
HNRNPC-221ENST00000555883 TBC1D8BQ0IIM8 1120 aa14.3□□□□□ -0.12
HNRNPC-221ENST00000555883 SCRN1Q12765 414 aa14.3□□□□□ -0.12
HNRNPC-221ENST00000555883 UGCGQ16739 394 aa14.3□□□□□ -0.12
HNRNPC-221ENST00000555883 PDE12Q6L8Q7 609 aaKnown RBP14.3□□□□□ -0.12
HNRNPC-221ENST00000555883 MIER3Q7Z3K6 550 aa14.3□□□□□ -0.12
HNRNPC-221ENST00000555883 KLHL23Q8NBE8 558 aa14.3□□□□□ -0.12
HNRNPC-221ENST00000555883 FAM20AQ96MK3 541 aa14.3□□□□□ -0.12
HNRNPC-221ENST00000555883 NAP1L4Q99733 375 aaKnown RBP14.3□□□□□ -0.12
HNRNPC-221ENST00000555883 SLKQ9H2G2 1235 aaPredicted RBP14.3□□□□□ -0.12
HNRNPC-221ENST00000555883 ATP6V0A4Q9HBG4 840 aa14.3□□□□□ -0.12
HNRNPC-221ENST00000555883 CLDND1Q9NY35 253 aa14.3□□□□□ -0.12
HNRNPC-221ENST00000555883 DDX25Q9UHL0 483 aaKnown RBP14.3□□□□□ -0.12
HNRNPC-221ENST00000555883 ARIH1Q9Y4X5 557 aaPredicted RBP14.3□□□□□ -0.12
HNRNPC-221ENST00000555883 PPME1Q9Y570 386 aa14.3□□□□□ -0.12
HNRNPC-221ENST00000555883 PCDHB12Q9Y5F1 795 aa14.3□□□□□ -0.12
HNRNPC-221ENST00000555883 MYH9P35579 1960 aaKnown RBP14.29□□□□□ -0.12
HNRNPC-221ENST00000555883 TBX3O15119 743 aa14.29□□□□□ -0.12
HNRNPC-221ENST00000555883 CHMP2AO43633 222 aa14.29□□□□□ -0.12
HNRNPC-221ENST00000555883 GPR37L1O60883 481 aa14.29□□□□□ -0.12
HNRNPC-221ENST00000555883 DARSP14868 501 aaKnown RBP14.29□□□□□ -0.12
HNRNPC-221ENST00000555883 ZSCAN20P17040 1043 aaPredicted RBP14.29□□□□□ -0.12
HNRNPC-221ENST00000555883 DNAJB1P25685 340 aa14.29□□□□□ -0.12
HNRNPC-221ENST00000555883 STK3Q13188 491 aa14.29□□□□□ -0.12
HNRNPC-221ENST00000555883 PPP2R5CQ13362 524 aa14.29□□□□□ -0.12
HNRNPC-221ENST00000555883 PAN2Q504Q3 1202 aaKnown RBP14.29□□□□□ -0.12
HNRNPC-221ENST00000555883 NEK8Q86SG6 692 aa14.29□□□□□ -0.12
HNRNPC-221ENST00000555883 LRRC71Q8N4P6 559 aa14.29□□□□□ -0.12
HNRNPC-221ENST00000555883 POF1BQ8WVV4 589 aa14.29□□□□□ -0.12
HNRNPC-221ENST00000555883 WASF1Q92558 559 aa14.29□□□□□ -0.12
HNRNPC-221ENST00000555883 AIFM3Q96NN9 605 aa14.29□□□□□ -0.12
HNRNPC-221ENST00000555883 CEP89Q96ST8 783 aa14.29□□□□□ -0.12
HNRNPC-221ENST00000555883 JPH2Q9BR39 696 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms